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C++ Particles::selectInside_noindex方法代码示例

本文整理汇总了C++中Particles::selectInside_noindex方法的典型用法代码示例。如果您正苦于以下问题:C++ Particles::selectInside_noindex方法的具体用法?C++ Particles::selectInside_noindex怎么用?C++ Particles::selectInside_noindex使用的例子?那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在Particles的用法示例。


在下文中一共展示了Particles::selectInside_noindex方法的1个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的C++代码示例。

示例1: calculateBoo

void calculateBoo(Particles &parts, const string& filename, const bool noZ=false, bool quiet=false)
{
    const string inputPath = filename.substr(0,filename.find_last_of("."));
    const string ext = filename.substr(filename.find_last_of(".")+1);
    const string head = filename.substr(0,filename.rfind("_t"));
    const string neck = filename.substr(head.size(), inputPath.size()-head.size());
    //select interesting particles and load (or make) bonds
    vector<size_t> inside, secondInside;
    try
    {
        BondSet bonds = loadBonds(inputPath+".bonds");
        parts.makeNgbList(bonds);
        inside = parts.selectInside_noindex(1.3*parts.radius, noZ);
        secondInside = parts.selectInside_noindex(2.0*1.3*parts.radius, noZ);
    }
    catch(invalid_argument &e)
    {
        if(!quiet) cout<<"bond network ";
        boost::progress_timer *ti;
        if(!quiet)  ti = new boost::progress_timer();
        parts.makeRTreeIndex();
        parts.makeNgbList(1.3);
        BondSet bonds = parts.getBonds();
        ofstream bondFile((inputPath+".bonds").c_str(), ios::out | ios::trunc);
        for(BondSet::const_iterator b=bonds.begin(); b!= bonds.end();++b)
            bondFile<<b->low()<<" "<<b->high()<<"\n";
        inside = parts.selectInside(1.3*parts.radius, noZ);
        secondInside = parts.selectInside(2.0*1.3*parts.radius, noZ);
        if(!quiet) delete ti;
    }
    const bool empty = inside.empty(), empty2 = secondInside.empty();
    if(empty)
        for(size_t p=0; p<parts.size(); ++p)
            inside.insert(inside.end(), p);
    if(empty2)
        for(size_t p=0; p<parts.size(); ++p)
            secondInside.insert(secondInside.end(), p);

    //calculate and export qlm
    vector<BooData> qlm, qlm_cg, qlm_sf;
    {
        boost::progress_timer *ti;
        if(!quiet)
        {
            cout<<"boo with and without surface bonds for "<<inside.size()<<" particles ";
            ti = new boost::progress_timer();
        }

        parts.getBOOs_SurfBOOs(qlm, qlm_sf);
        if(!empty)
        {
            parts.removeOutside(inside, qlm);
            parts.removeOutside(inside, qlm_sf);
        }
        if(!quiet) delete ti;
    }
    {
        if(!quiet) cout<<"coarse grained for "<<secondInside.size()<<" particles ";
        boost::progress_timer* ti;
        if(!quiet) ti = new boost::progress_timer();
        parts.getCgBOOs(secondInside, qlm, qlm_cg);
        if(!quiet) delete ti;
    }

    ofstream qlmFile((inputPath+".qlm").c_str(), ios::out | ios::trunc);
    copy(
        qlm.begin(), qlm.end(),
        ostream_iterator<BooData>(qlmFile,"\n")
        );
    qlmFile.close();

    ofstream qlmcgFile((head+"_space"+neck+".qlm").c_str(), ios::out | ios::trunc);
    copy(
        qlm_cg.begin(), qlm_cg.end(),
        ostream_iterator<BooData>(qlmcgFile,"\n")
        );
    qlmcgFile.close();

    //calculate and export invarients
    ofstream cloudFile((inputPath+".cloud").c_str(), ios::out | ios::trunc);
    cloudFile<<"#q4\tq6\tq8\tq10\tw4\tw6\tw8\tw10"<<endl;
    transform(
        qlm.begin(), qlm.end(),
        ostream_iterator<string>(cloudFile,"\n"),
        cloud_exporter()
        );
    cloudFile.close();

    ofstream cloud_cgFile((head+"_space"+neck+".cloud").c_str(), ios::out | ios::trunc);
    cloud_cgFile<<"#Q4\tQ6\tQ8\tQ10\tW4\tW6\tW8\tW10"<<endl;
    transform(
        qlm_cg.begin(), qlm_cg.end(),
        ostream_iterator<string>(cloud_cgFile,"\n"),
        cloud_exporter()
        );
    cloud_cgFile.close();

    ofstream cloud_sfFile((head+"_surf"+neck+".cloud").c_str(), ios::out | ios::trunc);
    cloud_cgFile<<"#Q4\tQ6\tW4\tW6"<<endl;
    transform(
//.........这里部分代码省略.........
开发者ID:MathieuLeocmach,项目名称:colloids,代码行数:101,代码来源:boo.cpp


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