本文整理汇总了Python中doekbase.data_api.annotation.genome_annotation.api.GenomeAnnotationAPI.get_features方法的典型用法代码示例。如果您正苦于以下问题：Python GenomeAnnotationAPI.get_features方法的具体用法？Python GenomeAnnotationAPI.get_features怎么用？Python GenomeAnnotationAPI.get_features使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类doekbase.data_api.annotation.genome_annotation.api.GenomeAnnotationAPI的用法示例。
在下文中一共展示了GenomeAnnotationAPI.get_features方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: get_features
# 需要导入模块: from doekbase.data_api.annotation.genome_annotation.api import GenomeAnnotationAPI [as 别名]
# 或者: from doekbase.data_api.annotation.genome_annotation.api.GenomeAnnotationAPI import get_features [as 别名]
def get_features(self, ctx, ref, feature_id_list):
"""
Retrieve Feature data.
@param feature_id_list List of Features to retrieve.
If None, returns all Feature data.
@return Mapping from Feature IDs to dicts of available data.
:param ref: instance of type "ObjectReference"
:param feature_id_list: instance of list of String
:returns: instance of mapping from String to type "Feature_data" ->
structure: parameter "feature_id" of String, parameter
"feature_type" of String, parameter "feature_function" of String,
parameter "feature_aliases" of mapping from String to list of
String, parameter "feature_dna_sequence_length" of Long, parameter
"feature_dna_sequence" of String, parameter "feature_md5" of
String, parameter "feature_locations" of list of type "Region" ->
structure: parameter "contig_id" of String, parameter "strand" of
String, parameter "start" of Long, parameter "length" of Long,
parameter "feature_publications" of list of String, parameter
"feature_quality_warnings" of list of String, parameter
"feature_quality_score" of list of String, parameter
"feature_notes" of String, parameter "feature_inference" of String
"""
# ctx is the context object
# return variables are: returnVal
#BEGIN get_features
ga = GenomeAnnotationAPI_local(self.services, ctx['token'], ref)
returnVal = ga.get_features(feature_id_list)
#END get_features
# At some point might do deeper type checking...
if not isinstance(returnVal, dict):
raise ValueError('Method get_features return value ' +
'returnVal is not type dict as required.')
# return the results
return [returnVal]