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Python GenomeAnnotationAPI.get_feature_dna方法代码示例

本文整理汇总了Python中doekbase.data_api.annotation.genome_annotation.api.GenomeAnnotationAPI.get_feature_dna方法的典型用法代码示例。如果您正苦于以下问题:Python GenomeAnnotationAPI.get_feature_dna方法的具体用法?Python GenomeAnnotationAPI.get_feature_dna怎么用?Python GenomeAnnotationAPI.get_feature_dna使用的例子?那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在doekbase.data_api.annotation.genome_annotation.api.GenomeAnnotationAPI的用法示例。


在下文中一共展示了GenomeAnnotationAPI.get_feature_dna方法的1个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的Python代码示例。

示例1: get_feature_dna

# 需要导入模块: from doekbase.data_api.annotation.genome_annotation.api import GenomeAnnotationAPI [as 别名]
# 或者: from doekbase.data_api.annotation.genome_annotation.api.GenomeAnnotationAPI import get_feature_dna [as 别名]
    def get_feature_dna(self, ctx, ref, feature_id_list):
        """
        Retrieve Feature DNA sequences.
        @param feature_id_list List of Feature IDs for which to retrieve sequences.
            If empty, returns data for all features.
        @return Mapping of Feature IDs to their DNA sequence.
        :param ref: instance of type "ObjectReference"
        :param feature_id_list: instance of list of String
        :returns: instance of mapping from String to String
        """
        # ctx is the context object
        # return variables are: returnVal
        #BEGIN get_feature_dna
        ga = GenomeAnnotationAPI_local(self.services, ctx['token'], ref)
        returnVal = ga.get_feature_dna(feature_id_list)
        #END get_feature_dna

        # At some point might do deeper type checking...
        if not isinstance(returnVal, dict):
            raise ValueError('Method get_feature_dna return value ' +
                             'returnVal is not type dict as required.')
        # return the results
        return [returnVal]
开发者ID:msneddon,项目名称:genome_annotation_api,代码行数:25,代码来源:GenomeAnnotationAPIImpl.py


注:本文中的doekbase.data_api.annotation.genome_annotation.api.GenomeAnnotationAPI.get_feature_dna方法示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台,相关代码片段筛选自各路编程大神贡献的开源项目,源码版权归原作者所有,传播和使用请参考对应项目的License;未经允许,请勿转载。