本文整理汇总了Python中dark.titles.TitleAlignments.hspCount方法的典型用法代码示例。如果您正苦于以下问题：Python TitleAlignments.hspCount方法的具体用法？Python TitleAlignments.hspCount怎么用？Python TitleAlignments.hspCount使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类dark.titles.TitleAlignments的用法示例。
在下文中一共展示了TitleAlignments.hspCount方法的2个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: testHspCount
# 需要导入模块: from dark.titles import TitleAlignments [as 别名]
# 或者: from dark.titles.TitleAlignments import hspCount [as 别名]
def testHspCount(self):
"""
The hspCount function must indicate how many HSPs were found in
total for all the alignments to a title.
"""
hsp1 = HSP(7)
hsp2 = HSP(14)
hsp3 = HSP(21)
titleAlignments = TitleAlignments('subject title', 55)
read = Read('id1', 'AAA')
titleAlignment = TitleAlignment(read, [hsp1, hsp2])
titleAlignments.addAlignment(titleAlignment)
read = Read('id2', 'AAA')
titleAlignment = TitleAlignment(read, [hsp3])
titleAlignments.addAlignment(titleAlignment)
self.assertEqual(3, titleAlignments.hspCount())示例2: testHspCountZero
# 需要导入模块: from dark.titles import TitleAlignments [as 别名]
# 或者: from dark.titles.TitleAlignments import hspCount [as 别名]
def testHspCountZero(self):
"""
The hspCount function must return zero if no reads matched a title.
"""
titleAlignments = TitleAlignments('subject title', 55)
self.assertEqual(0, titleAlignments.hspCount())