本文整理汇总了Python中dark.titles.TitleAlignments.bestHsp方法的典型用法代码示例。如果您正苦于以下问题：Python TitleAlignments.bestHsp方法的具体用法？Python TitleAlignments.bestHsp怎么用？Python TitleAlignments.bestHsp使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类dark.titles.TitleAlignments的用法示例。
在下文中一共展示了TitleAlignments.bestHsp方法的2个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: testBestHsp
# 需要导入模块: from dark.titles import TitleAlignments [as 别名]
# 或者: from dark.titles.TitleAlignments import bestHsp [as 别名]
def testBestHsp(self):
"""
The bestHsp function must return the HSP with the best score for the
HSPs all the alignments matching a title.
"""
hsp1 = LSP(7)
hsp2 = LSP(15)
hsp3 = LSP(21)
titleAlignments = TitleAlignments('subject title', 55)
read = Read('id1', 'AAA')
titleAlignment = TitleAlignment(read, [hsp1, hsp2])
titleAlignments.addAlignment(titleAlignment)
read = Read('id2', 'AAA')
titleAlignment = TitleAlignment(read, [hsp3])
titleAlignments.addAlignment(titleAlignment)
self.assertEqual(hsp1, titleAlignments.bestHsp())示例2: testBestHsp
# 需要导入模块: from dark.titles import TitleAlignments [as 别名]
# 或者: from dark.titles.TitleAlignments import bestHsp [as 别名]
def testBestHsp(self):
"""
The bestHsp function must return the HSP with the best score for all
the HSPs for all the alignments matching a title.
"""
hsp1 = HSP(7)
hsp2 = HSP(15)
hsp3 = HSP(21)
titleAlignments = TitleAlignments("subject title", 55)
read = Read("id1", "AAA")
titleAlignment = TitleAlignment(read, [hsp1, hsp2])
titleAlignments.addAlignment(titleAlignment)
read = Read("id2", "AAA")
titleAlignment = TitleAlignment(read, [hsp3])
titleAlignments.addAlignment(titleAlignment)
self.assertEqual(hsp3, titleAlignments.bestHsp())