本文整理汇总了Python中Population.Population.setPop方法的典型用法代码示例。如果您正苦于以下问题：Python Population.setPop方法的具体用法？Python Population.setPop怎么用？Python Population.setPop使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类Population.Population的用法示例。
在下文中一共展示了Population.setPop方法的2个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: __init__
# 需要导入模块: from Population import Population [as 别名]
# 或者: from Population.Population import setPop [as 别名]
#.........这里部分代码省略.........
def getDisease(self):
return self.newDisease
def getPopulation(self):
return self.newPop
def getIntLog(self):
return self.intLog
def getTotalInts(self):
return self.totalInts
def getTimeLog(self):
return self.timeLog
def getStartTime(self):
return self.startTime
def getEndTime(self):
return self.endTime
def getTimePerInt(self):
return self.timePerInt
def getRunTime(self):
return self.runTime
def getRunVals(self):
return self.runVals
# --- Additional Functions
def preSimSetup(self):
self.newPop.setPop()
self.newPop.logStart()
self.newPop.createInitialGraph()
self.runVals = [(self.popSize), (self.intsPerTime * self.popSize), self.meanPosVal, self.meanAvoidVal,
self.newDisease.getSickValue(), self.newDisease.getSickTime(), self.disRisk,
self.newDisease.getTransRate(), self.immuneProb]
timeLogFirstRow = ["Time", "PopSize", "NumSick", "NumImmune", "New Disease Transmissions", "Effective R0", "NumInteractions"]
self.timeLog.append(timeLogFirstRow)
timeLogStartRow = [0, self.newPop.getSize(), self.newPop.getInitialSick(),
self.newPop.getInitialImmune(), 0, 0, 0]
self.timeLog.append(timeLogStartRow)
self.startTime = time.time()
self.writeInitialPop()
def runSim(self):
lowPopFlag = False
for i in range(1, self.numTimePeriods+1):
if lowPopFlag: break
newTrans = 0
numInts = int(round(self.intsPerTime * self.newPop.getSize()))
for j in range(1,numInts+1):
deadCheck = True
while deadCheck:
edgeNum = random.randint(0, len(self.newPop.agents.es)-1)
randEdge = self.newPop.agents.es[edgeNum]
vert1 = self.newPop.agents.vs[randEdge.source]
vert2 = self.newPop.agents.vs[randEdge.target]
agent1 = vert1["Agent"]
agent2 = vert2["Agent"]
newInt = Interaction(agent1, agent2)示例2: __init__
# 需要导入模块: from Population import Population [as 别名]
# 或者: from Population.Population import setPop [as 别名]
class Simulation:
def __init__(self, simNum):
self.simNum = simNum
self.numTimePeriods = 50 # number of time periods that a simulation should run
self.logInteractions = True # boolean indicating whether to log each interaction during the simulation (set to 'false' for large populations)
self.popSize = 1000 #Size of the population
self.minFam = 2 # minimum number of agents in each family
self.maxFam = 6 # maximum number of agents in each family
self.igConnectMin = 2 # minimum number of ingroup (non-family) connections for each agent
self.igConnectMax = 5 # maximum number of ingroup (non-family) connections for each agent
self.xConnects = round(.1 * self.popSize) # set the number of outgroup connections as a proportion of the total population size
self.meanPosVal = 1 # set the average health value change resulting from an interaction
self.meanAvoidVal = -1 # set the average health value change resulting from avoiding an interaction
self.immuneProb = 0 # set the probability that an agent has natural immunity from disease
self.newDisease = Disease() # initialize a disease that can be spread in the poppulation
self.newPop = Population(self.popSize, self.immuneProb, self.newDisease, self.xConnects, self.minFam, self.maxFam, self.igConnectMin, self.igConnectMax) # initialize a new population graph using the parameters set above
self.intLog = [] # initialize a new interaction log as a list
self.totalInts = 0 # initialize the total number of interactions to zero
self.timeLog = [] # initialize a new log for summary statistics at each time period
self.startTime = None # initialize the variable to hold the system time associated with the start of the simulation
self.endTime = None # initialize the variable to hold the system time associated with the end of the simulation
self.timePerInt = None # initialize the variable to hold the average time per interaction during the simulation
self.runTime = None # initialize the variable to hold the total run time of the simultion
self.runVals = None # initialize the variable to hold the log of parameters governing the simulation run
# --- Accessor Functions
def getSimNum(self):
return self.simNum
def getNumTimePeriods(self):
return self.numTimePeriods
def getLogInteractions(self):
return self.logInteractions
def getPopSize(self):
return self.getPopSize
def getMinFam(self):
return self.minFam
def getMaxFam(self):
return self.maxFam
def getIGConnectMin(self):
return self.igConnectMin
def getIGConnectMax(self):
return self.igConnectMax
def getIntsPerTime(self):
return self.intsPerTime
def getMeanPosVal(self):
return self.meanPosVal
def getMeanAvoidVal(self):
return self.meanAvoidVal
def getImmuneProb(self):
return self.immuneProb
def getDisease(self):
return self.newDisease
def getPopulation(self):
return self.newPop
def getIntLog(self):
return self.intLog
def getTotalInts(self):
return self.totalInts
def getTimeLog(self):
return self.timeLog
def getStartTime(self):
return self.startTime
def getEndTime(self):
return self.endTime
def getTimePerInt(self):
return self.timePerInt
def getRunTime(self):
return self.runTime
def getRunVals(self):
return self.runVals
#-------------------------
# --- Class Functions
#-------------------------
def preSimSetup(self):
# Create initial Population
self.newPop.setPop()
#.........这里部分代码省略.........