本文整理汇总了Python中sourmash._minhash.MinHash.intersection方法的典型用法代码示例。如果您正苦于以下问题:Python MinHash.intersection方法的具体用法?Python MinHash.intersection怎么用?Python MinHash.intersection使用的例子?那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类sourmash._minhash.MinHash
的用法示例。
在下文中一共展示了MinHash.intersection方法的1个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: test_intersection_1
# 需要导入模块: from sourmash._minhash import MinHash [as 别名]
# 或者: from sourmash._minhash.MinHash import intersection [as 别名]
def test_intersection_1(track_abundance):
a = MinHash(20, 10, track_abundance=track_abundance)
b = MinHash(20, 10, track_abundance=track_abundance)
a.add_sequence('TGCCGCCCAGCA')
b.add_sequence('TGCCGCCCAGCA')
common = set(a.get_mins())
combined_size = 3
intersection, size = a.intersection(b)
assert intersection == common
assert combined_size == size
intersection, size = b.intersection(b)
assert intersection == common
assert combined_size == size
intersection, size = b.intersection(a)
assert intersection == common
assert combined_size == size
intersection, size = a.intersection(a)
assert intersection == common
assert combined_size == size
# add same sequence again
b.add_sequence('TGCCGCCCAGCA')
intersection, size = a.intersection(b)
assert intersection == common
assert combined_size == size
intersection, size = b.intersection(b)
assert intersection == common
assert combined_size == size
intersection, size = b.intersection(a)
assert intersection == common
assert combined_size == size
intersection, size = a.intersection(a)
assert intersection == common
assert combined_size == size
a.add_sequence('GTCCGCCCAGTGA')
b.add_sequence('GTCCGCCCAGTGG')
new_in_common = set(a.get_mins()).intersection(set(b.get_mins()))
new_combined_size = 8
intersection, size = a.intersection(b)
assert intersection == new_in_common
assert size == new_combined_size
intersection, size = b.intersection(a)
assert intersection == new_in_common
assert size == new_combined_size
intersection, size = a.intersection(a)
assert intersection == set(a.get_mins())
intersection, size = b.intersection(b)
assert intersection == set(b.get_mins())