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C++ ModelConfig::GetNuisanceParameters方法代码示例

本文整理汇总了C++中ModelConfig::GetNuisanceParameters方法的典型用法代码示例。如果您正苦于以下问题:C++ ModelConfig::GetNuisanceParameters方法的具体用法?C++ ModelConfig::GetNuisanceParameters怎么用?C++ ModelConfig::GetNuisanceParameters使用的例子?那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在ModelConfig的用法示例。


在下文中一共展示了ModelConfig::GetNuisanceParameters方法的15个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的C++代码示例。

示例1: slrts

// internal routine to run the inverter
HypoTestInverterResult *
RooStats::HypoTestInvTool::RunInverter(RooWorkspace * w,
                                       const char * modelSBName, const char * modelBName, 
                                       const char * dataName, int type,  int testStatType, 
                                       bool useCLs, int npoints, double poimin, double poimax, 
                                       int ntoys,
                                       bool useNumberCounting,
                                       const char * nuisPriorName ){

   std::cout << "Running HypoTestInverter on the workspace " << w->GetName() << std::endl;
  
   w->Print();
  
  
   RooAbsData * data = w->data(dataName); 
   if (!data) { 
      Error("StandardHypoTestDemo","Not existing data %s",dataName);
      return 0;
   }
   else 
      std::cout << "Using data set " << dataName << std::endl;
  
   if (mUseVectorStore) { 
      RooAbsData::setDefaultStorageType(RooAbsData::Vector);
      data->convertToVectorStore() ;
   }
  
  
   // get models from WS
   // get the modelConfig out of the file
   ModelConfig* bModel = (ModelConfig*) w->obj(modelBName);
   ModelConfig* sbModel = (ModelConfig*) w->obj(modelSBName);
  
   if (!sbModel) {
      Error("StandardHypoTestDemo","Not existing ModelConfig %s",modelSBName);
      return 0;
   }
   // check the model 
   if (!sbModel->GetPdf()) { 
      Error("StandardHypoTestDemo","Model %s has no pdf ",modelSBName);
      return 0;
   }
   if (!sbModel->GetParametersOfInterest()) {
      Error("StandardHypoTestDemo","Model %s has no poi ",modelSBName);
      return 0;
   }
   if (!sbModel->GetObservables()) {
      Error("StandardHypoTestInvDemo","Model %s has no observables ",modelSBName);
      return 0;
   }
   if (!sbModel->GetSnapshot() ) { 
      Info("StandardHypoTestInvDemo","Model %s has no snapshot  - make one using model poi",modelSBName);
      sbModel->SetSnapshot( *sbModel->GetParametersOfInterest() );
   }
  
   // case of no systematics
   // remove nuisance parameters from model
   if (noSystematics) { 
      const RooArgSet * nuisPar = sbModel->GetNuisanceParameters();
      if (nuisPar && nuisPar->getSize() > 0) { 
         std::cout << "StandardHypoTestInvDemo" << "  -  Switch off all systematics by setting them constant to their initial values" << std::endl;
         RooStats::SetAllConstant(*nuisPar);
      }
      if (bModel) { 
         const RooArgSet * bnuisPar = bModel->GetNuisanceParameters();
         if (bnuisPar) 
            RooStats::SetAllConstant(*bnuisPar);
      }
   }
  
   if (!bModel || bModel == sbModel) {
      Info("StandardHypoTestInvDemo","The background model %s does not exist",modelBName);
      Info("StandardHypoTestInvDemo","Copy it from ModelConfig %s and set POI to zero",modelSBName);
      bModel = (ModelConfig*) sbModel->Clone();
      bModel->SetName(TString(modelSBName)+TString("_with_poi_0"));      
      RooRealVar * var = dynamic_cast<RooRealVar*>(bModel->GetParametersOfInterest()->first());
      if (!var) return 0;
      double oldval = var->getVal();
      var->setVal(0);
      bModel->SetSnapshot( RooArgSet(*var)  );
      var->setVal(oldval);
   }
   else { 
      if (!bModel->GetSnapshot() ) { 
         Info("StandardHypoTestInvDemo","Model %s has no snapshot  - make one using model poi and 0 values ",modelBName);
         RooRealVar * var = dynamic_cast<RooRealVar*>(bModel->GetParametersOfInterest()->first());
         if (var) { 
            double oldval = var->getVal();
            var->setVal(0);
            bModel->SetSnapshot( RooArgSet(*var)  );
            var->setVal(oldval);
         }
         else { 
            Error("StandardHypoTestInvDemo","Model %s has no valid poi",modelBName);
            return 0;
         }         
      }
   }

//.........这里部分代码省略.........
开发者ID:SusyRa2b,项目名称:Statistics,代码行数:101,代码来源:StandardHypoTestInvDemo.C

示例2: workspace_preparer


//.........这里部分代码省略.........

    //Set Nuisnaces

    RooArgSet nuis(*newworkspace->var("prime_lumi"), *newworkspace->var("prime_eff"), *newworkspace->var("prime_rho"), *newworkspace->var("bprime"));

    // priors (for Bayesian calculation)
    newworkspace->factory("Uniform::prior_signal(sigma)"); // for parameter of interest
    newworkspace->factory("Uniform::prior_bg_b(bprime)"); // for data driven nuisance parameter
    newworkspace->factory("PROD::prior(prior_signal,prior_bg_b)"); // total prior


    //Observed data is pulled from histogram.
    //TFile *data_file = new TFile(data_file_name);
    TFile *data_file = new TFile(data_file_name);
    TH2D *data_hist = (TH2D *)data_file->Get(data_hist_name_in_file);
    RooDataHist *pData = new RooDataHist("data", "data", obs, data_hist);
    newworkspace->import(*pData);

    // Now, we will draw our data from a RooDataHist.
    /*TFile *data_file = new TFile(data_file_name);
    TTree *data_tree = (TTree *) data_file->Get(data_hist_name_in_file);
    RooDataSet *pData = new RooDataSet("data", "data", data_tree, obs);
    newworkspace->import(*pData);*/


    // Craft the signal+background model
    ModelConfig * pSbModel = new ModelConfig("SbModel");
    pSbModel->SetWorkspace(*newworkspace);
    pSbModel->SetPdf(*newworkspace->pdf("model"));
    pSbModel->SetPriorPdf(*newworkspace->pdf("prior"));
    pSbModel->SetParametersOfInterest(poi);
    pSbModel->SetNuisanceParameters(nuis);
    pSbModel->SetObservables(obs);
    pSbModel->SetGlobalObservables(globalObs);

    // set all but obs, poi and nuisance to const
    SetConstants(newworkspace, pSbModel);
    newworkspace->import(*pSbModel);


    // background-only model
    // use the same PDF as s+b, with sig=0
    // POI value under the background hypothesis
    // (We will set the value to 0 later)

    Double_t poiValueForBModel = 0.0;
    ModelConfig* pBModel = new ModelConfig(*(RooStats::ModelConfig *)newworkspace->obj("SbModel"));
    pBModel->SetName("BModel");
    pBModel->SetWorkspace(*newworkspace);
    newworkspace->import(*pBModel);

    // find global maximum with the signal+background model
    // with conditional MLEs for nuisance parameters
    // and save the parameter point snapshot in the Workspace
    //  - safer to keep a default name because some RooStats calculators
    //    will anticipate it
    RooAbsReal * pNll = pSbModel->GetPdf()->createNLL(*pData);
    RooAbsReal * pProfile = pNll->createProfile(RooArgSet());
    pProfile->getVal(); // this will do fit and set POI and nuisance parameters to fitted values
    RooArgSet * pPoiAndNuisance = new RooArgSet();
    if(pSbModel->GetNuisanceParameters())
        pPoiAndNuisance->add(*pSbModel->GetNuisanceParameters());
    pPoiAndNuisance->add(*pSbModel->GetParametersOfInterest());
    cout << "\nWill save these parameter points that correspond to the fit to data" << endl;
    pPoiAndNuisance->Print("v");
    pSbModel->SetSnapshot(*pPoiAndNuisance);
    delete pProfile;
    delete pNll;
    delete pPoiAndNuisance;


    // Find a parameter point for generating pseudo-data
    // with the background-only data.
    // Save the parameter point snapshot in the Workspace
    pNll = pBModel->GetPdf()->createNLL(*pData);
    pProfile = pNll->createProfile(poi);
    ((RooRealVar *)poi.first())->setVal(poiValueForBModel);
    pProfile->getVal(); // this will do fit and set nuisance parameters to profiled values
    pPoiAndNuisance = new RooArgSet();
    if(pBModel->GetNuisanceParameters())
        pPoiAndNuisance->add(*pBModel->GetNuisanceParameters());
    pPoiAndNuisance->add(*pBModel->GetParametersOfInterest());
    cout << "\nShould use these parameter points to generate pseudo data for bkg only" << endl;
    pPoiAndNuisance->Print("v");
    pBModel->SetSnapshot(*pPoiAndNuisance);
    delete pProfile;
    delete pNll;
    delete pPoiAndNuisance;

    // save workspace to file
    newworkspace->writeToFile("ws_twobin.root");

    // clean up
    delete newworkspace;
    delete pData;
    delete pSbModel;
    delete pBModel;


} // ----- end of tutorial ----------------------------------------
开发者ID:maxhorton,项目名称:cls_calculator,代码行数:101,代码来源:workspace_preparer.C

示例3: TwoBinInstructional


//.........这里部分代码省略.........

  // global observables
  RooArgSet globalObs(*pWs->var("nom_lumi"), *pWs->var("nom_eff_a"), *pWs->var("nom_eff_b"), 
		      *pWs->var("nom_tau"),
		      "global_obs");

  // parameters of interest
  RooArgSet poi(*pWs->var("xsec"), "poi");

  // nuisance parameters
  RooArgSet nuis(*pWs->var("lumi"), *pWs->var("eff_a"), *pWs->var("eff_b"), *pWs->var("tau"), "nuis");

  // priors (for Bayesian calculation)
  pWs->factory("Uniform::prior_xsec(xsec)"); // for parameter of interest
  pWs->factory("Uniform::prior_bg_b(bg_b)"); // for data driven nuisance parameter
  pWs->factory("PROD::prior(prior_xsec,prior_bg_b)"); // total prior

  // create data
  pWs->var("na")->setVal(14);
  pWs->var("nb")->setVal(11);
  RooDataSet * pData = new RooDataSet("data","",obs);
  pData->add(obs);
  pWs->import(*pData);
  //pData->Print();

  // signal+background model
  ModelConfig * pSbModel = new ModelConfig("SbModel");
  pSbModel->SetWorkspace(*pWs);
  pSbModel->SetPdf(*pWs->pdf("model"));
  pSbModel->SetPriorPdf(*pWs->pdf("prior"));
  pSbModel->SetParametersOfInterest(poi);
  pSbModel->SetNuisanceParameters(nuis);
  pSbModel->SetObservables(obs);
  pSbModel->SetGlobalObservables(globalObs);

  // set all but obs, poi and nuisance to const
  SetConstants(pWs, pSbModel);
  pWs->import(*pSbModel);


  // background-only model
  // use the same PDF as s+b, with xsec=0
  // POI value under the background hypothesis
  Double_t poiValueForBModel = 0.0;
  ModelConfig* pBModel = new ModelConfig(*(RooStats::ModelConfig *)pWs->obj("SbModel"));
  pBModel->SetName("BModel");
  pBModel->SetWorkspace(*pWs);
  pWs->import(*pBModel);


  // find global maximum with the signal+background model
  // with conditional MLEs for nuisance parameters
  // and save the parameter point snapshot in the Workspace
  //  - safer to keep a default name because some RooStats calculators
  //    will anticipate it
  RooAbsReal * pNll = pSbModel->GetPdf()->createNLL(*pData);
  RooAbsReal * pProfile = pNll->createProfile(RooArgSet());
  pProfile->getVal(); // this will do fit and set POI and nuisance parameters to fitted values
  RooArgSet * pPoiAndNuisance = new RooArgSet();
  if(pSbModel->GetNuisanceParameters())
    pPoiAndNuisance->add(*pSbModel->GetNuisanceParameters());
  pPoiAndNuisance->add(*pSbModel->GetParametersOfInterest());
  cout << "\nWill save these parameter points that correspond to the fit to data" << endl;
  pPoiAndNuisance->Print("v");
  pSbModel->SetSnapshot(*pPoiAndNuisance);
  delete pProfile;
  delete pNll;
  delete pPoiAndNuisance;

  // Find a parameter point for generating pseudo-data
  // with the background-only data.
  // Save the parameter point snapshot in the Workspace
  pNll = pBModel->GetPdf()->createNLL(*pData);
  pProfile = pNll->createProfile(poi);
  ((RooRealVar *)poi.first())->setVal(poiValueForBModel);
  pProfile->getVal(); // this will do fit and set nuisance parameters to profiled values
  pPoiAndNuisance = new RooArgSet();
  if(pBModel->GetNuisanceParameters())
    pPoiAndNuisance->add(*pBModel->GetNuisanceParameters());
  pPoiAndNuisance->add(*pBModel->GetParametersOfInterest());
  cout << "\nShould use these parameter points to generate pseudo data for bkg only" << endl;
  pPoiAndNuisance->Print("v");
  pBModel->SetSnapshot(*pPoiAndNuisance);
  delete pProfile;
  delete pNll;
  delete pPoiAndNuisance;

  // inspect workspace
  pWs->Print();

  // save workspace to file
  pWs->writeToFile("ws_twobin.root");

  // clean up
  delete pWs;
  delete pData;
  delete pSbModel;
  delete pBModel;

} // ----- end of tutorial ----------------------------------------
开发者ID:SiewYan,项目名称:MonoJetAnalysis,代码行数:101,代码来源:roostats_twobin.C

示例4: compute_p0

void compute_p0(const char* inFileName,
	    const char* wsName = "combined",
	    const char* modelConfigName = "ModelConfig",
	    const char* dataName = "obsData",
	    const char* asimov1DataName = "asimovData_1",
	    const char* conditional1Snapshot = "conditionalGlobs_1",
	    const char* nominalSnapshot = "nominalGlobs",
	    string smass = "130",
	    string folder = "test")
{
  double mass;
  stringstream massStr;
  massStr << smass;
  massStr >> mass;

  double mu_profile_value = 1; // mu value to profile the obs data at wbefore generating the expected
  bool doConditional      = 1; // do conditional expected data
  bool remakeData         = 0; // handle unphysical pdf cases in H->ZZ->4l
  bool doUncap            = 1; // uncap p0
  bool doInj              = 0; // setup the poi for injection study (zero is faster if you're not)
  bool doObs              = 1; // compute median significance
  bool doMedian           = 1; // compute observed significance

  TStopwatch timer;
  timer.Start();

  TFile f(inFileName);
  RooWorkspace* ws = (RooWorkspace*)f.Get(wsName);
  if (!ws)
  {
    cout << "ERROR::Workspace: " << wsName << " doesn't exist!" << endl;
    return;
  }
  ModelConfig* mc = (ModelConfig*)ws->obj(modelConfigName);
  if (!mc)
  {
    cout << "ERROR::ModelConfig: " << modelConfigName << " doesn't exist!" << endl;
    return;
  }
  RooDataSet* data = (RooDataSet*)ws->data(dataName);
  if (!data)
  {
    cout << "ERROR::Dataset: " << dataName << " doesn't exist!" << endl;
    return;
  }

  mc->GetNuisanceParameters()->Print("v");

  ROOT::Math::MinimizerOptions::SetDefaultMinimizer("Minuit2");
  ROOT::Math::MinimizerOptions::SetDefaultStrategy(0);
  ROOT::Math::MinimizerOptions::SetDefaultPrintLevel(1);
  cout << "Setting max function calls" << endl;

  ws->loadSnapshot("conditionalNuis_0");
  RooArgSet nuis(*mc->GetNuisanceParameters());

  RooRealVar* mu = (RooRealVar*)mc->GetParametersOfInterest()->first();

  RooAbsPdf* pdf = mc->GetPdf();

  string condSnapshot(conditional1Snapshot);
  RooArgSet nuis_tmp2 = *mc->GetNuisanceParameters();
  RooNLLVar* obs_nll = doObs ? (RooNLLVar*)pdf->createNLL(*data, Constrain(nuis_tmp2)) : NULL;

  RooDataSet* asimovData1 = (RooDataSet*)ws->data(asimov1DataName);
  RooRealVar* emb = (RooRealVar*)mc->GetNuisanceParameters()->find("ATLAS_EMB");
  if (!asimovData1 || (string(inFileName).find("ic10") != string::npos && emb))
  {
    if (emb) emb->setVal(0.7);
    cout << "Asimov data doesn't exist! Please, allow me to build one for you..." << endl;
    string mu_str, mu_prof_str;
    asimovData1 = makeAsimovData(mc, doConditional, ws, obs_nll, 1, &mu_str, &mu_prof_str, mu_profile_value, true);
    condSnapshot="conditionalGlobs"+mu_prof_str;
  }
  
  if (!doUncap) mu->setRange(0, 40);
  else mu->setRange(-40, 40);

  RooAbsPdf* pdf = mc->GetPdf();

  RooArgSet nuis_tmp1 = *mc->GetNuisanceParameters();
  RooNLLVar* asimov_nll = (RooNLLVar*)pdf->createNLL(*asimovData1, Constrain(nuis_tmp1));

  //do asimov
  mu->setVal(1);
  mu->setConstant(0);
  if (!doInj) mu->setConstant(1);

  int status,sign;
  double med_sig=0,obs_sig=0,asimov_q0=0,obs_q0=0;

  if (doMedian)
  {
    ws->loadSnapshot(condSnapshot.c_str());
    if (doInj) ws->loadSnapshot("conditionalNuis_inj");
    else ws->loadSnapshot("conditionalNuis_1");
    mc->GetGlobalObservables()->Print("v");
    mu->setVal(0);
    mu->setConstant(1);
    status = minimize(asimov_nll, ws);
//.........这里部分代码省略.........
开发者ID:dguest,项目名称:HistFitter,代码行数:101,代码来源:compute_p0.C

示例5: slrts


//.........这里部分代码省略.........
   RatioOfProfiledLikelihoodsTestStat 
      ropl(*sbModel->GetPdf(), *bModel->GetPdf(), bModel->GetSnapshot());
   ropl.SetSubtractMLE(false);
   
   //MyProfileLikelihoodTestStat profll(*sbModel->GetPdf());
   ProfileLikelihoodTestStat profll(*sbModel->GetPdf());
   if (testStatType == 3) profll.SetOneSided(1);
   if (optimize) profll.SetReuseNLL(true);

   TestStatistic * testStat = &slrts;
   if (testStatType == 1) testStat = &ropl;
   if (testStatType == 2 || testStatType == 3) testStat = &profll;
  
   
   HypoTestCalculatorGeneric *  hc = 0;
   if (type == 0) hc = new FrequentistCalculator(*data, *bModel, *sbModel);
   else hc = new HybridCalculator(*data, *bModel, *sbModel);

   ToyMCSampler *toymcs = (ToyMCSampler*)hc->GetTestStatSampler();
   //=== DEBUG
   ///// toymcs->SetWS( w ) ;
   //=== DEBUG
   toymcs->SetNEventsPerToy(1);
   toymcs->SetTestStatistic(testStat);
   if (optimize) toymcs->SetUseMultiGen(true);


   if (type == 1) { 
      HybridCalculator *hhc = (HybridCalculator*) hc;
      hhc->SetToys(ntoys,ntoys); 

      // check for nuisance prior pdf 
      if (bModel->GetPriorPdf() && sbModel->GetPriorPdf() ) {
         hhc->ForcePriorNuisanceAlt(*bModel->GetPriorPdf());
         hhc->ForcePriorNuisanceNull(*sbModel->GetPriorPdf());
      }
      else {
         if (bModel->GetNuisanceParameters() || sbModel->GetNuisanceParameters() ) {
            Error("RA2bHypoTestInvDemo","Cannnot run Hybrid calculator because no prior on the nuisance parameter is specified");
            return 0;
         }
      }
   } 
   else 
      ((FrequentistCalculator*) hc)->SetToys(ntoys,ntoys); 

   // Get the result
   RooMsgService::instance().getStream(1).removeTopic(RooFit::NumIntegration);


   TStopwatch tw; tw.Start(); 
   const RooArgSet * poiSet = sbModel->GetParametersOfInterest();
   RooRealVar *poi = (RooRealVar*)poiSet->first();

   // fit the data first
   sbModel->GetPdf()->fitTo(*data);
   double poihat  = poi->getVal();


   HypoTestInverter calc(*hc);
   calc.SetConfidenceLevel(0.95);

   calc.UseCLs(useCls);
   calc.SetVerbose(true);

   // can speed up using proof-lite
   if (useProof && nworkers > 1) { 
      ProofConfig pc(*w, nworkers, "", kFALSE);
      toymcs->SetProofConfig(&pc);    // enable proof
   }


   printf(" npoints = %d, poimin = %7.2f, poimax = %7.2f\n\n", npoints, poimin, poimax ) ;
   cout << flush ;

   if ( npoints==1 ) {

      std::cout << "Evaluating one point : " << poimax << std::endl;
      calc.RunOnePoint(poimax);

   } else if (npoints > 0) {
      if (poimin >= poimax) { 
         // if no min/max given scan between MLE and +4 sigma 
         poimin = int(poihat);
         poimax = int(poihat +  4 * poi->getError());
      }
      std::cout << "Doing a fixed scan  in interval : " << poimin << " , " << poimax << std::endl;
      calc.SetFixedScan(npoints,poimin,poimax);
   }
   else { 
      //poi->setMax(10*int( (poihat+ 10 *poi->getError() )/10 ) );
      std::cout << "Doing an  automatic scan  in interval : " << poi->getMin() << " , " << poi->getMax() << std::endl;
   }

   cout << "\n\n right before calc.GetInterval(), ntoys = " << ntoys << " \n\n" << flush ;
   HypoTestInverterResult * r = calc.GetInterval();


   return r; 
}
开发者ID:SusyRa2b,项目名称:Statistics,代码行数:101,代码来源:RA2bHypoTestInvDemo.c

示例6: OneSidedFrequentistUpperLimitWithBands


//.........这里部分代码省略.........
   TH1F* histOfThresholds = new TH1F("histOfThresholds","",
                                       parameterScan->numEntries(),
                                       firstPOI->getMin(),
                                       firstPOI->getMax());
   histOfThresholds->GetXaxis()->SetTitle(firstPOI->GetName());
   histOfThresholds->GetYaxis()->SetTitle("Threshold");

   // loop through the points that were tested and ask confidence belt
   // what the upper/lower thresholds were.
   // For FeldmanCousins, the lower cut off is always 0
   for(Int_t i=0; i<parameterScan->numEntries(); ++i){
      tmpPoint = (RooArgSet*) parameterScan->get(i)->clone("temp");
      //cout <<"get threshold"<<endl;
      double arMax = belt->GetAcceptanceRegionMax(*tmpPoint);
      double poiVal = tmpPoint->getRealValue(firstPOI->GetName()) ;
      histOfThresholds->Fill(poiVal,arMax);
   }
   TCanvas* c1 = new TCanvas();
   c1->Divide(2);
   c1->cd(1);
   histOfThresholds->SetMinimum(0);
   histOfThresholds->Draw();
   c1->cd(2);

   // -------------------------------------------------------
   // Now we generate the expected bands and power-constraint

   // First: find parameter point for mu=0, with conditional MLEs for nuisance parameters
   RooAbsReal* nll = mc->GetPdf()->createNLL(*data);
   RooAbsReal* profile = nll->createProfile(*mc->GetParametersOfInterest());
   firstPOI->setVal(0.);
   profile->getVal(); // this will do fit and set nuisance parameters to profiled values
   RooArgSet* poiAndNuisance = new RooArgSet();
   if(mc->GetNuisanceParameters())
      poiAndNuisance->add(*mc->GetNuisanceParameters());
   poiAndNuisance->add(*mc->GetParametersOfInterest());
   w->saveSnapshot("paramsToGenerateData",*poiAndNuisance);
   RooArgSet* paramsToGenerateData = (RooArgSet*) poiAndNuisance->snapshot();
   cout << "\nWill use these parameter points to generate pseudo data for bkg only" << endl;
   paramsToGenerateData->Print("v");


   RooArgSet unconditionalObs;
   unconditionalObs.add(*mc->GetObservables());
   unconditionalObs.add(*mc->GetGlobalObservables()); // comment this out for the original conditional ensemble

   double CLb=0;
   double CLbinclusive=0;

   // Now we generate background only and find distribution of upper limits
   TH1F* histOfUL = new TH1F("histOfUL","",100,0,firstPOI->getMax());
   histOfUL->GetXaxis()->SetTitle("Upper Limit (background only)");
   histOfUL->GetYaxis()->SetTitle("Entries");
   for(int imc=0; imc<nToyMC; ++imc){

      // set parameters back to values for generating pseudo data
      //    cout << "\n get current nuis, set vals, print again" << endl;
      w->loadSnapshot("paramsToGenerateData");
      //    poiAndNuisance->Print("v");

      RooDataSet* toyData = 0;
      // now generate a toy dataset
      if(!mc->GetPdf()->canBeExtended()){
         if(data->numEntries()==1)
            toyData = mc->GetPdf()->generate(*mc->GetObservables(),1);
         else
开发者ID:Y--,项目名称:root,代码行数:67,代码来源:OneSidedFrequentistUpperLimitWithBands.C

示例7: runQ

void runQ(const char* inFileName,
	    const char* wsName = "combined",
	    const char* modelConfigName = "ModelConfig",
	    const char* dataName = "obsData",
	    const char* asimov0DataName = "asimovData_0",
	    const char* conditional0Snapshot = "conditionalGlobs_0",
	    const char* asimov1DataName = "asimovData_1",
	    const char* conditional1Snapshot = "conditionalGlobs_1",
	    const char* nominalSnapshot = "nominalGlobs",
	    string smass = "130",
	    string folder = "test")
{
  double mass;
  stringstream massStr;
  massStr << smass;
  massStr >> mass;

  bool errFast = 0;
  bool goFast = 1;
  bool remakeData = 1;
  bool doRightSided = 1;
  bool doInj = 0;
  bool doObs = 1;
  bool doMedian = 1;

  TStopwatch timer;
  timer.Start();

  TFile f(inFileName);
  RooWorkspace* ws = (RooWorkspace*)f.Get(wsName);
  if (!ws)
  {
    cout << "ERROR::Workspace: " << wsName << " doesn't exist!" << endl;
    return;
  }
  ModelConfig* mc = (ModelConfig*)ws->obj(modelConfigName);
  if (!mc)
  {
    cout << "ERROR::ModelConfig: " << modelConfigName << " doesn't exist!" << endl;
    return;
  }
  RooDataSet* data = (RooDataSet*)ws->data(dataName);
  if (!data)
  {
    cout << "ERROR::Dataset: " << dataName << " doesn't exist!" << endl;
    return;
  }





  mc->GetNuisanceParameters()->Print("v");

  RooNLLVar::SetIgnoreZeroEntries(1);
  ROOT::Math::MinimizerOptions::SetDefaultMinimizer("Minuit2");
  ROOT::Math::MinimizerOptions::SetDefaultStrategy(0);
  ROOT::Math::MinimizerOptions::SetDefaultPrintLevel(1);
  cout << "Setting max function calls" << endl;
  //ROOT::Math::MinimizerOptions::SetDefaultMaxFunctionCalls(20000);
  RooMinimizer::SetMaxFunctionCalls(10000);

  ws->loadSnapshot("conditionalNuis_0");
  RooArgSet nuis(*mc->GetNuisanceParameters());

  RooRealVar* mu = (RooRealVar*)mc->GetParametersOfInterest()->first();



  if (string(mc->GetPdf()->ClassName()) == "RooSimultaneous" && remakeData)
  {
    RooSimultaneous* simPdf = (RooSimultaneous*)mc->GetPdf();
    double min_mu;
    data = makeData(data, simPdf, mc->GetObservables(), mu, mass, min_mu);
  }







  RooDataSet* asimovData0 = (RooDataSet*)ws->data(asimov0DataName);
  if (!asimovData0)
  {
    cout << "Asimov data doesn't exist! Please, allow me to build one for you..." << endl;
    makeAsimovData(mc, true, ws, mc->GetPdf(), data, 1);
    ws->Print();
    asimovData0 = (RooDataSet*)ws->data("asimovData_0");
  }

  RooDataSet* asimovData1 = (RooDataSet*)ws->data(asimov1DataName);
  if (!asimovData1)
  {
    cout << "Asimov data doesn't exist! Please, allow me to build one for you..." << endl;
    makeAsimovData(mc, true, ws, mc->GetPdf(), data, 0);
    ws->Print();
    asimovData1 = (RooDataSet*)ws->data("asimovData_1");
  }
  
//.........这里部分代码省略.........
开发者ID:lspiller,项目名称:limitcode,代码行数:101,代码来源:runQ.C

示例8: runSig

TH1D* runSig(RooWorkspace* ws,
             const char* modelConfigName = "ModelConfig",
             const char* dataName = "obsData",
             const char* asimov1DataName = "asimovData_1",
             const char* conditional1Snapshot = "conditionalGlobs_1",
             const char* nominalSnapshot = "nominalGlobs")
{
    string defaultMinimizer    = "Minuit";     // or "Minuit"
    int defaultStrategy        = 2;             // Minimization strategy. 0-2. 0 = fastest, least robust. 2 = slowest, most robust

    double mu_profile_value = 1; // mu value to profile the obs data at wbefore generating the expected
    bool doUncap            = 1; // uncap p0
    bool doInj              = 0; // setup the poi for injection study (zero is faster if you're not)
    bool doMedian           = 1; // compute median significance
    bool isBlind            = 0; // Dont look at observed data
    bool doConditional      = !isBlind; // do conditional expected data
    bool doObs              = !isBlind; // compute observed significance

    TStopwatch timer;
    timer.Start();

    if (!ws)
    {
        cout << "ERROR::Workspace is NULL!" << endl;
        return NULL;
    }
    ModelConfig* mc = (ModelConfig*)ws->obj(modelConfigName);
    if (!mc)
    {
        cout << "ERROR::ModelConfig: " << modelConfigName << " doesn't exist!" << endl;
        return NULL;
    }
    RooDataSet* data = (RooDataSet*)ws->data(dataName);
    if (!data)
    {
        cout << "ERROR::Dataset: " << dataName << " doesn't exist!" << endl;
        return NULL;
    }

    mc->GetNuisanceParameters()->Print("v");

    //RooNLLVar::SetIgnoreZeroEntries(1);
    ROOT::Math::MinimizerOptions::SetDefaultMinimizer(defaultMinimizer.c_str());
    ROOT::Math::MinimizerOptions::SetDefaultStrategy(defaultStrategy);
    ROOT::Math::MinimizerOptions::SetDefaultPrintLevel(-1);
    //  cout << "Setting max function calls" << endl;
    //ROOT::Math::MinimizerOptions::SetDefaultMaxFunctionCalls(20000);
    //RooMinimizer::SetMaxFunctionCalls(10000);

    ws->loadSnapshot("conditionalNuis_0");
    RooArgSet nuis(*mc->GetNuisanceParameters());

    RooRealVar* mu = (RooRealVar*)mc->GetParametersOfInterest()->first();

    RooAbsPdf* pdf_temp = mc->GetPdf();

    string condSnapshot(conditional1Snapshot);
    RooArgSet nuis_tmp2 = *mc->GetNuisanceParameters();
    RooNLLVar* obs_nll = doObs ? (RooNLLVar*)pdf_temp->createNLL(*data, Constrain(nuis_tmp2)) : NULL;

    RooDataSet* asimovData1 = (RooDataSet*)ws->data(asimov1DataName);
    if (!asimovData1)
    {
        cout << "Asimov data doesn't exist! Please, allow me to build one for you..." << endl;
        string mu_str, mu_prof_str;

        asimovData1 = makeAsimovData(mc, doConditional, ws, obs_nll, 1, &mu_str, &mu_prof_str, mu_profile_value, true);
        condSnapshot="conditionalGlobs"+mu_prof_str;

        //makeAsimovData(mc, true, ws, mc->GetPdf(), data, 0);
        //ws->Print();
        //asimovData1 = (RooDataSet*)ws->data("asimovData_1");
    }

    if (!doUncap) mu->setRange(0, 40);
    else mu->setRange(-40, 40);

    RooAbsPdf* pdf = mc->GetPdf();
    RooArgSet nuis_tmp1 = *mc->GetNuisanceParameters();
    RooNLLVar* asimov_nll = (RooNLLVar*)pdf->createNLL(*asimovData1, Constrain(nuis_tmp1));

    //do asimov
    mu->setVal(1);
    mu->setConstant(0);
    if (!doInj) mu->setConstant(1);

    int status,sign;
    double med_sig=0,obs_sig=0,asimov_q0=0,obs_q0=0;

    if (doMedian)
    {
        ws->loadSnapshot(condSnapshot.c_str());
        if (doInj) ws->loadSnapshot("conditionalNuis_inj");
        else ws->loadSnapshot("conditionalNuis_1");
        mc->GetGlobalObservables()->Print("v");
        mu->setVal(0);
        mu->setConstant(1);
        status = minimize(asimov_nll, ws);
        if (status >= 0) cout << "Success!" << endl;

//.........这里部分代码省略.........
开发者ID:sagittaeri,项目名称:htt,代码行数:101,代码来源:runSig.C

示例9: workspace


//.........这里部分代码省略.........

      pdflist.add( *allNuisancePdfs ) ;

      pdflist.Print() ;
      printf("\n") ;

      RooProdPdf* likelihood = new RooProdPdf( "likelihood", "hbb likelihood", pdflist ) ;
      likelihood->Print() ;


    //-------------------------------------------------------------------------


  //  printf("\n\n Running a test fit.\n\n") ;


  //  dsObserved -> Print() ;
  //  dsObserved -> printMultiline(cout, 1, kTRUE, "") ;


  //  printf("\n\n =============================================\n\n") ;
  //  likelihood -> fitTo( *dsObserved, PrintLevel(3), Hesse(0), Minos(0) ) ;
  //  printf("\n\n =============================================\n\n") ;







     //-- Set up RooStats models.

      printf("\n\n Setting up S+B model.\n\n") ;

      RooArgSet poi( *rv_sig_strength, "poi" ) ;
      RooUniform signal_prior( "signal_prior", "signal_prior", *rv_sig_strength ) ;

      ModelConfig sbModel ("SbModel");
      sbModel.SetWorkspace( workspace ) ;
      sbModel.SetPdf( *likelihood ) ;
      sbModel.SetParametersOfInterest( poi );
      sbModel.SetPriorPdf(signal_prior);
      sbModel.SetObservables( *observedParametersList );
      sbModel.SetNuisanceParameters( *allNuisances );
      sbModel.SetGlobalObservables( *globalObservables );

      workspace.Print() ;

      printf("\n\n Doing fit for S+B model.\n" ) ; fflush(stdout) ;

      RooAbsReal* pNll = sbModel.GetPdf()->createNLL(*dsObserved);
      RooAbsReal* pProfile = pNll->createProfile(RooArgSet());
      pProfile->getVal();
      RooArgSet* pPoiAndNuisance = new RooArgSet();
      pPoiAndNuisance->add(*sbModel.GetParametersOfInterest());
      if(sbModel.GetNuisanceParameters()) pPoiAndNuisance->add(*sbModel.GetNuisanceParameters());
      printf("\n\n Will save these parameter points that correspond to the fit to data.\n\n") ; fflush(stdout) ;
      pPoiAndNuisance->Print("v");
      sbModel.SetSnapshot(*pPoiAndNuisance);
      workspace.import (sbModel);

      delete pProfile ;
      delete pNll ;
      delete pPoiAndNuisance ;

      printf("\n\n Setting up BG-only model.\n\n") ;

      ModelConfig bModel (*(RooStats::ModelConfig *)workspace.obj("SbModel"));
      bModel.SetName("BModel");
      bModel.SetWorkspace(workspace);

      printf("\n\n Doing fit for BG-only model.\n" ) ; fflush(stdout) ;
      pNll = bModel.GetPdf()->createNLL(*dsObserved);
      pProfile = pNll->createProfile(*bModel.GetParametersOfInterest());
      ((RooRealVar *)(bModel.GetParametersOfInterest()->first()))->setVal(0.);
      pProfile->getVal();
      pPoiAndNuisance = new RooArgSet();
      pPoiAndNuisance->add(*bModel.GetParametersOfInterest());
      if(bModel.GetNuisanceParameters()) pPoiAndNuisance->add(*bModel.GetNuisanceParameters());
      printf("\n\n Should use these parameter points to generate pseudo data for bkg only.\n\n") ; fflush(stdout) ;
      pPoiAndNuisance->Print("v");
      bModel.SetSnapshot(*pPoiAndNuisance);
      workspace.import (bModel);

      delete pProfile ;
      delete pNll ;
      delete pPoiAndNuisance ;

      workspace.Print() ;

      printf("\n\n Saving workspace in : %s\n\n", outfile ) ;

      gSystem->Exec(" mkdir -p outputfiles " ) ;

      workspace.writeToFile( outfile ) ;




   } // build_hbb_workspace1.
开发者ID:SusyRa2b,项目名称:Statistics,代码行数:101,代码来源:build_hbb_workspace1.c

示例10: StandardHypoTestDemo


//.........这里部分代码省略.........
  
  /////////////////////////////////////////////////////////////
  // Tutorial starts here
  ////////////////////////////////////////////////////////////

  // get the workspace out of the file
  RooWorkspace* w = (RooWorkspace*) file->Get(workspaceName);
  if(!w){
    cout <<"workspace not found" << endl;
    return;
  }
  w->Print();

  // get the modelConfig out of the file
  ModelConfig* sbModel = (ModelConfig*) w->obj(modelSBName);


  // get the modelConfig out of the file
  RooAbsData* data = w->data(dataName);

  // make sure ingredients are found
  if(!data || !sbModel){
    w->Print();
    cout << "data or ModelConfig was not found" <<endl;
    return;
  }
  // make b model
  ModelConfig* bModel = (ModelConfig*) w->obj(modelBName);


   // case of no systematics
   // remove nuisance parameters from model
   if (noSystematics) { 
      const RooArgSet * nuisPar = sbModel->GetNuisanceParameters();
      if (nuisPar && nuisPar->getSize() > 0) { 
         std::cout << "StandardHypoTestInvDemo" << "  -  Switch off all systematics by setting them constant to their initial values" << std::endl;
         RooStats::SetAllConstant(*nuisPar);
      }
      if (bModel) { 
         const RooArgSet * bnuisPar = bModel->GetNuisanceParameters();
         if (bnuisPar) 
            RooStats::SetAllConstant(*bnuisPar);
      }
   }


  if (!bModel ) {
      Info("StandardHypoTestInvDemo","The background model %s does not exist",modelBName);
      Info("StandardHypoTestInvDemo","Copy it from ModelConfig %s and set POI to zero",modelSBName);
      bModel = (ModelConfig*) sbModel->Clone();
      bModel->SetName(TString(modelSBName)+TString("B_only"));      
      RooRealVar * var = dynamic_cast<RooRealVar*>(bModel->GetParametersOfInterest()->first());
      if (!var) return;
      double oldval = var->getVal();
      var->setVal(0);
      //bModel->SetSnapshot( RooArgSet(*var, *w->var("lumi"))  );
      bModel->SetSnapshot( RooArgSet(*var)  );
      var->setVal(oldval);
  }
  
   if (!sbModel->GetSnapshot() || poiValue > 0) { 
      Info("StandardHypoTestDemo","Model %s has no snapshot  - make one using model poi",modelSBName);
      RooRealVar * var = dynamic_cast<RooRealVar*>(sbModel->GetParametersOfInterest()->first());
      if (!var) return;
      double oldval = var->getVal();
      if (poiValue > 0)  var->setVal(poiValue);
开发者ID:SusyRa2b,项目名称:Statistics,代码行数:67,代码来源:StandardHypoTestDemo.C

示例11: fit_toy

result fit_toy(RooWorkspace* wspace, int n, const RooArgSet* globals) {
    RooRandom::randomGenerator()->SetSeed(0);
    // TFile f(filename);
    // RooWorkspace *wspace = (RooWorkspace*)f.Get("combined");
    ModelConfig* model = (ModelConfig*)wspace->obj("ModelConfig");

    RooAbsPdf* pdf;
    pdf = model->GetPdf();

    RooAbsPdf* top_constraint = (RooAbsPdf*)wspace->obj("top_ratio_constraint");
    RooAbsPdf* vv_constraint = (RooAbsPdf*)wspace->obj("vv_ratio_constraint");
    RooAbsPdf* top_vv_constraint_sf = (RooAbsPdf*)wspace->obj("top_vv_ratio_sf_constraint");
    RooAbsPdf* top_vv_constraint_of = (RooAbsPdf*)wspace->obj("top_vv_ratio_of_constraint");


    // generate constraint global observables
    RooRealVar *nom_top_ratio = (RooRealVar*)wspace->obj("nom_top_ratio");
    nom_top_ratio->setRange(0, 100);
    RooRealVar *nom_vv_ratio = (RooRealVar*)wspace->obj("nom_vv_ratio");
    nom_vv_ratio->setRange(0,100);
    RooRealVar *nom_top_vv_ratio_sf = (RooRealVar*)wspace->obj("nom_top_vv_ratio_sf");
    nom_top_vv_ratio_sf->setRange(0,100);
    RooRealVar *nom_top_vv_ratio_of = (RooRealVar*)wspace->obj("nom_top_vv_ratio_of");
    nom_top_vv_ratio_of->setRange(0,100);

    RooDataSet *nom_top_generated = top_constraint->generateSimGlobal(RooArgSet(*nom_top_ratio), 1);
    nom_top_ratio->setVal(((RooRealVar*)nom_top_generated->get(0)->find("nom_top_ratio"))->getVal());

    RooDataSet *nom_vv_generated = vv_constraint->generateSimGlobal(RooArgSet(*nom_vv_ratio), 1);
    nom_vv_ratio->setVal(((RooRealVar*)nom_vv_generated->get(0)->find("nom_vv_ratio"))->getVal());

    RooDataSet *nom_top_vv_sf_generated = top_vv_constraint_sf->generateSimGlobal(RooArgSet(*nom_top_vv_ratio_sf), 1);
    nom_top_vv_ratio_sf->setVal(((RooRealVar*)nom_top_vv_sf_generated->get(0)->find("nom_top_vv_ratio_sf"))->getVal());

    RooDataSet *nom_top_vv_of_generated = top_vv_constraint_of->generateSimGlobal(RooArgSet(*nom_top_vv_ratio_of), 1);
    nom_top_vv_ratio_of->setVal(((RooRealVar*)nom_top_vv_of_generated->get(0)->find("nom_top_vv_ratio_of"))->getVal());

    NumEventsTestStat* dummy = new NumEventsTestStat(*pdf);

    ToyMCSampler* mc = new ToyMCSampler(*dummy, 1);
    mc->SetPdf(*pdf);
    mc->SetObservables(*model->GetObservables());
    mc->SetGlobalObservables(*globals);
    mc->SetNuisanceParameters(*model->GetNuisanceParameters());
    mc->SetParametersForTestStat(*model->GetParametersOfInterest());
    mc->SetNEventsPerToy(n);

    RooArgSet constr;
    constr.add(*(model->GetNuisanceParameters()));
    RemoveConstantParameters(&constr);

    RooDataSet* toy_data = (RooDataSet*)mc->GenerateToyData(*const_cast<RooArgSet*>(model->GetSnapshot()));

    RooFitResult *res = pdf->fitTo(*toy_data, Constrain(constr), PrintLevel(0), Save(),
                                               Range("fitRange"), InitialHesse(),
                                               ExternalConstraints(RooArgSet(*top_constraint, *vv_constraint, *top_vv_constraint_sf, *top_vv_constraint_of)));
    result yield = get_results(wspace, res);
    yield.of.generated_sum.val = toy_data->sumEntries("(channelCat==channelCat::of) & (obs_x_of>120)");
    yield.sf.generated_sum.val = toy_data->sumEntries("(channelCat==channelCat::sf) & (obs_x_sf>120)");

    delete mc;
    delete dummy;
    // f.Close();

    return yield;
}
开发者ID:neggert,项目名称:MCTSusy,代码行数:66,代码来源:IntegralError.C

示例12: StandardHistFactoryPlotsWithCategories

void StandardHistFactoryPlotsWithCategories(const char* infile = "",
                                            const char* workspaceName = "combined",
                                            const char* modelConfigName = "ModelConfig",
                                            const char* dataName = "obsData"){


   double nSigmaToVary=5.;
   double muVal=0;
   bool doFit=false;

   // -------------------------------------------------------
   // First part is just to access a user-defined file
   // or create the standard example file if it doesn't exist
   const char* filename = "";
   if (!strcmp(infile,"")) {
      filename = "results/example_combined_GaussExample_model.root";
      bool fileExist = !gSystem->AccessPathName(filename); // note opposite return code
                                                           // if file does not exists generate with histfactory
      if (!fileExist) {
#ifdef _WIN32
         cout << "HistFactory file cannot be generated on Windows - exit" << endl;
         return;
#endif
         // Normally this would be run on the command line
         cout <<"will run standard hist2workspace example"<<endl;
         gROOT->ProcessLine(".! prepareHistFactory .");
         gROOT->ProcessLine(".! hist2workspace config/example.xml");
         cout <<"\n\n---------------------"<<endl;
         cout <<"Done creating example input"<<endl;
         cout <<"---------------------\n\n"<<endl;
      }

   }
   else
      filename = infile;

   // Try to open the file
   TFile *file = TFile::Open(filename);

   // if input file was specified byt not found, quit
   if(!file ){
      cout <<"StandardRooStatsDemoMacro: Input file " << filename << " is not found" << endl;
      return;
   }

   // -------------------------------------------------------
   // Tutorial starts here
   // -------------------------------------------------------

   // get the workspace out of the file
   RooWorkspace* w = (RooWorkspace*) file->Get(workspaceName);
   if(!w){
      cout <<"workspace not found" << endl;
      return;
   }

   // get the modelConfig out of the file
   ModelConfig* mc = (ModelConfig*) w->obj(modelConfigName);

   // get the modelConfig out of the file
   RooAbsData* data = w->data(dataName);

   // make sure ingredients are found
   if(!data || !mc){
      w->Print();
      cout << "data or ModelConfig was not found" <<endl;
      return;
   }

   // -------------------------------------------------------
   // now use the profile inspector

   RooRealVar* obs = (RooRealVar*)mc->GetObservables()->first();
   TList* list = new TList();


   RooRealVar * firstPOI = dynamic_cast<RooRealVar*>(mc->GetParametersOfInterest()->first());

   firstPOI->setVal(muVal);
   //  firstPOI->setConstant();
   if(doFit){
      mc->GetPdf()->fitTo(*data);
   }

   // -------------------------------------------------------


   mc->GetNuisanceParameters()->Print("v");
   int  nPlotsMax = 1000;
   cout <<" check expectedData by category"<<endl;
   RooDataSet* simData=NULL;
   RooSimultaneous* simPdf = NULL;
   if(strcmp(mc->GetPdf()->ClassName(),"RooSimultaneous")==0){
      cout <<"Is a simultaneous PDF"<<endl;
      simPdf = (RooSimultaneous *)(mc->GetPdf());
   } else {
      cout <<"Is not a simultaneous PDF"<<endl;
   }


//.........这里部分代码省略.........
开发者ID:Y--,项目名称:root,代码行数:101,代码来源:StandardHistFactoryPlotsWithCategories.C

示例13: StandardTestStatDistributionDemo


//.........这里部分代码省略.........
   // if input file was specified byt not found, quit
   if(!file ){
      cout <<"StandardRooStatsDemoMacro: Input file " << filename << " is not found" << endl;
      return;
   }


  /////////////////////////////////////////////////////////////
  // Now get the data and workspace
  ////////////////////////////////////////////////////////////

  // get the workspace out of the file
  RooWorkspace* w = (RooWorkspace*) file->Get(workspaceName);
  if(!w){
    cout <<"workspace not found" << endl;
    return;
  }

  // get the modelConfig out of the file
  ModelConfig* mc = (ModelConfig*) w->obj(modelConfigName);

  // get the modelConfig out of the file
  RooAbsData* data = w->data(dataName);

  // make sure ingredients are found
  if(!data || !mc){
    w->Print();
    cout << "data or ModelConfig was not found" <<endl;
    return;
  }

  mc->Print();
  /////////////////////////////////////////////////////////////
  // Now find the upper limit based on the asymptotic results
  ////////////////////////////////////////////////////////////
  RooRealVar* firstPOI = (RooRealVar*) mc->GetParametersOfInterest()->first();
  ProfileLikelihoodCalculator plc(*data,*mc);
  LikelihoodInterval* interval = plc.GetInterval();
  double plcUpperLimit = interval->UpperLimit(*firstPOI);
  delete interval;
  cout << "\n\n--------------------------------------"<<endl;
  cout <<"Will generate sampling distribution at " << firstPOI->GetName() << " = " << plcUpperLimit <<endl;
  int nPOI = mc->GetParametersOfInterest()->getSize();
  if(nPOI>1){
    cout <<"not sure what to do with other parameters of interest, but here are their values"<<endl;
    mc->GetParametersOfInterest()->Print("v");
  }

  /////////////////////////////////////////////
  // create thte test stat sampler
  ProfileLikelihoodTestStat ts(*mc->GetPdf());

  // to avoid effects from boundary and simplify asymptotic comparison, set min=-max
  if(allowNegativeMu)
    firstPOI->setMin(-1*firstPOI->getMax());

  // temporary RooArgSet
  RooArgSet poi;
  poi.add(*mc->GetParametersOfInterest());

  // create and configure the ToyMCSampler
  ToyMCSampler sampler(ts,nToyMC);
  sampler.SetPdf(*mc->GetPdf());
  sampler.SetObservables(*mc->GetObservables());
  sampler.SetGlobalObservables(*mc->GetGlobalObservables());
  if(!mc->GetPdf()->canBeExtended() && (data->numEntries()==1)){
    cout << "tell it to use 1 event"<<endl;
    sampler.SetNEventsPerToy(1);
  }
  firstPOI->setVal(plcUpperLimit); // set POI value for generation
  sampler.SetParametersForTestStat(*mc->GetParametersOfInterest()); // set POI value for evaluation

  if (useProof) {
     ProofConfig pc(*w, nworkers, "",false);
     sampler.SetProofConfig(&pc); // enable proof
  }

  firstPOI->setVal(plcUpperLimit);
  RooArgSet allParameters;
  allParameters.add(*mc->GetParametersOfInterest());
  allParameters.add(*mc->GetNuisanceParameters());
  allParameters.Print("v");

  SamplingDistribution* sampDist = sampler.GetSamplingDistribution(allParameters);
  SamplingDistPlot plot;
  plot.AddSamplingDistribution(sampDist);
  plot.GetTH1F(sampDist)->GetYaxis()->SetTitle(Form("f(-log #lambda(#mu=%.2f) | #mu=%.2f)",plcUpperLimit,plcUpperLimit));
  plot.SetAxisTitle(Form("-log #lambda(#mu=%.2f)",plcUpperLimit));

  TCanvas* c1 = new TCanvas("c1");
  c1->SetLogy();
  plot.Draw();
  double min = plot.GetTH1F(sampDist)->GetXaxis()->GetXmin();
  double max = plot.GetTH1F(sampDist)->GetXaxis()->GetXmax();

  TF1* f = new TF1("f",Form("2*ROOT::Math::chisquared_pdf(2*x,%d,0)",nPOI),min,max);
  f->Draw("same");
  c1->SaveAs("standard_test_stat_distribution.pdf");

}
开发者ID:MycrofD,项目名称:root,代码行数:101,代码来源:StandardTestStatDistributionDemo.C

示例14: splitws


//.........这里部分代码省略.........
    channelNames.insert("OF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
    channelNames.insert("OF_CZpeak_1j"+string(!do2011?"_2012":""));
    channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
    channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));

    channelNames.insert("ee_signalLike1_2j"+string(!do2011?"_2012":""));
    channelNames.insert("SF_topbox_2j"+string(!do2011?"_2012":""));
  }
  else {
    cout << "Channel " << channel << " not defined. Please check!" << endl;
    exit(1);
  }

  // bool fix = 1;
  stringstream inFileName;

  inFileName << "workspaces/" << inFolderName << "/" << mass << ".root";
  TFile f(inFileName.str().c_str());
  
  RooWorkspace* w = (RooWorkspace*)f.Get("combWS");
  if (!w) w = (RooWorkspace*)f.Get("combined");
  
  RooDataSet* data = (RooDataSet*)w->data("combData");
  if (!data) data = (RooDataSet*)w->data("obsData");
  
  ModelConfig* mc = (ModelConfig*)w->obj("ModelConfig");
  
  RooRealVar* weightVar = w->var("weightVar");
  
  RooRealVar* mu = (RooRealVar*)mc->GetParametersOfInterest()->first();
  if (!mu) mu = w->var("SigXsecOverSM");

  const RooArgSet* mc_obs = mc->GetObservables();
  const RooArgSet* mc_nuis = mc->GetNuisanceParameters();
  const RooArgSet* mc_globs = mc->GetGlobalObservables();
  const RooArgSet* mc_poi = mc->GetParametersOfInterest();

  RooArgSet nuis = *mc_nuis;
  RooArgSet antiNuis = *mc_nuis;

  RooArgSet globs = *mc_globs;
  RooArgSet antiGlobs = *mc_globs;

  RooArgSet allParams;

  RooSimultaneous* simPdf = (RooSimultaneous*)mc->GetPdf();
  RooCategory* cat = (RooCategory*)&simPdf->indexCat();

  RooArgSet nuis_tmp = nuis;
  RooArgSet fullConstraints = *simPdf->getAllConstraints(*mc_obs,nuis_tmp,false);

  vector<string> foundChannels;
  vector<string> skippedChannels;  

  cout << "Getting constraints" << endl;
  map<string, RooDataSet*> data_map;
  map<string, RooAbsPdf*> pdf_map;
  RooCategory* decCat = new RooCategory("dec_channel","dec_channel");
  // int i = 0;
  TIterator* catItr = cat->typeIterator();
  RooCatType* type;
  RooArgSet allConstraints;
  while ((type = (RooCatType*)catItr->Next())) {
    RooAbsPdf* pdf =  simPdf->getPdf(type->GetName());

    string typeName(type->GetName());
开发者ID:lspiller,项目名称:limitcode,代码行数:67,代码来源:splitws.C

示例15: OneSidedFrequentistUpperLimitWithBands_intermediate


//.........这里部分代码省略.........
  TH1F* histOfThresholds = new TH1F("histOfThresholds","",
				    parameterScan->numEntries(),
				    firstPOI->getMin(),
				    firstPOI->getMax());
  histOfThresholds->GetXaxis()->SetTitle(firstPOI->GetName());
  histOfThresholds->GetYaxis()->SetTitle("Threshold");

  // loop through the points that were tested and ask confidence belt
  // what the upper/lower thresholds were.
  // For FeldmanCousins, the lower cut off is always 0
  for(Int_t i=0; i<parameterScan->numEntries(); ++i){
    tmpPoint = (RooArgSet*) parameterScan->get(i)->clone("temp");
    double arMax = belt->GetAcceptanceRegionMax(*tmpPoint);
    double poiVal = tmpPoint->getRealValue(firstPOI->GetName()) ;
    histOfThresholds->Fill(poiVal,arMax);
  }
  TCanvas* c1 = new TCanvas();
  c1->Divide(2);
  c1->cd(1);
  histOfThresholds->SetMinimum(0);
  histOfThresholds->Draw();
  c1->cd(2);

  /////////////////////////////////////////////////////////////
  // Now we generate the expected bands and power-constriant
  ////////////////////////////////////////////////////////////

  // First: find parameter point for mu=0, with conditional MLEs for nuisance parameters
  RooAbsReal* nll = mc->GetPdf()->createNLL(*data);
  RooAbsReal* profile = nll->createProfile(*mc->GetParametersOfInterest());
  firstPOI->setVal(0.);
  profile->getVal(); // this will do fit and set nuisance parameters to profiled values
  RooArgSet* poiAndNuisance = new RooArgSet();
  if(mc->GetNuisanceParameters())
    poiAndNuisance->add(*mc->GetNuisanceParameters());
  poiAndNuisance->add(*mc->GetParametersOfInterest());
  w->saveSnapshot("paramsToGenerateData",*poiAndNuisance);
  RooArgSet* paramsToGenerateData = (RooArgSet*) poiAndNuisance->snapshot();
  cout << "\nWill use these parameter points to generate pseudo data for bkg only" << endl;
  paramsToGenerateData->Print("v");


  double CLb=0;
  double CLbinclusive=0;

  // Now we generate background only and find distribution of upper limits
  TH1F* histOfUL = new TH1F("histOfUL","",100,0,firstPOI->getMax());
  histOfUL->GetXaxis()->SetTitle("Upper Limit (background only)");
  histOfUL->GetYaxis()->SetTitle("Entries");
  for(int imc=0; imc<nToyMC; ++imc){

    // set parameters back to values for generating pseudo data
    w->loadSnapshot("paramsToGenerateData");

    // in 5.30 there is a nicer way to generate toy data  & randomize global obs
    RooAbsData* toyData = toymcsampler->GenerateToyData(*paramsToGenerateData);

    // get test stat at observed UL in observed data
    firstPOI->setVal(observedUL);
    double toyTSatObsUL = fc.GetTestStatSampler()->EvaluateTestStatistic(*toyData,tmpPOI);
    //    toyData->get()->Print("v");
    //    cout <<"obsTSatObsUL " <<obsTSatObsUL << "toyTS " << toyTSatObsUL << endl;
    if(obsTSatObsUL < toyTSatObsUL) // (should be checked)
      CLb+= (1.)/nToyMC;
    if(obsTSatObsUL <= toyTSatObsUL) // (should be checked)
      CLbinclusive+= (1.)/nToyMC;
开发者ID:gerbaudo,项目名称:hlfv-fitmodel,代码行数:67,代码来源:OneSidedFrequentistUpperLimitWithBands_intermediate.C


注:本文中的ModelConfig::GetNuisanceParameters方法示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台,相关代码片段筛选自各路编程大神贡献的开源项目,源码版权归原作者所有,传播和使用请参考对应项目的License;未经允许,请勿转载。