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C++ SequenceTree::standardize方法代码示例

本文整理汇总了C++中SequenceTree::standardize方法的典型用法代码示例。如果您正苦于以下问题:C++ SequenceTree::standardize方法的具体用法?C++ SequenceTree::standardize怎么用?C++ SequenceTree::standardize使用的例子?那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在SequenceTree的用法示例。


在下文中一共展示了SequenceTree::standardize方法的2个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的C++代码示例。

示例1: remap_T_indices

/// \brief Re-index the leaves of tree \a T so that the labels have the same ordering as in \a names.
///
/// \param T The leaf-labelled tree.
/// \param names The ordered leaf labels.
///
void remap_T_indices(SequenceTree& T,const vector<string>& names)
{
  //----- Remap leaf indices for T onto A's leaf sequence indices -----//
  try {
    vector<int> mapping = compute_mapping(T.get_sequences(),names);

    T.standardize(mapping);
  }
  catch(const bad_mapping<string>& b)
  {
    bad_mapping<string> b2(b.missing,b.from);
    if (b.from == 0)
      b2<<"Couldn't find leaf sequence \""<<b2.missing<<"\" in names.";
    else
      b2<<"Sequence '"<<b2.missing<<"' not found in the tree.";
    throw b2;
  }
}
开发者ID:argriffing,项目名称:BAli-Phy,代码行数:23,代码来源:setup.C

示例2: remap_T_leaf_indices

/// \brief Re-index the leaves of tree \a T so that the labels have the same ordering as in \a names.
///
/// \param T The leaf-labelled tree.
/// \param names The ordered leaf labels.
///
void remap_T_leaf_indices(SequenceTree& T,const vector<string>& names)
{
  assert(names.size() == T.n_leaves());
  //----- Remap leaf indices for T onto A's leaf sequence indices -----//
  try {
    vector<int> mapping = compute_mapping(T.get_leaf_labels(), names);

    T.standardize(mapping);
  }
  catch(const bad_mapping<string>& b)
  {
    bad_mapping<string> b2 = b;
    b2.clear();
    if (b2.from == 0)
      b2<<"Couldn't find leaf sequence \""<<b2.missing<<"\" in names.";
    else
      b2<<"Sequence '"<<b2.missing<<"' not found in the tree.";
    throw b2;
  }
}
开发者ID:,项目名称:,代码行数:25,代码来源:


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