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Python Result.totalLoci方法代碼示例

本文整理匯總了Python中result.Result.totalLoci方法的典型用法代碼示例。如果您正苦於以下問題:Python Result.totalLoci方法的具體用法?Python Result.totalLoci怎麽用?Python Result.totalLoci使用的例子?那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在result.Result的用法示例。


在下文中一共展示了Result.totalLoci方法的1個代碼示例,這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚,您的評價將有助於係統推薦出更棒的Python代碼示例。

示例1: str

# 需要導入模塊: from result import Result [as 別名]
# 或者: from result.Result import totalLoci [as 別名]
    print "Chromosome " + str(curChr) + ". Reading loci Data."
    result.lociLoadStart = time.time()
    
    # Now that we have primary keys for each SNP, read in loci data
    with open(curLociFilePath,'r') as csvfile:
        data = csv.reader(csvfile,delimiter='\t')
        for row in data:
            if(len(row) == 4):
                # Load loci in pgsql statements
                if row[0] in rsidList and rsidList[row[0]] > 0: # If RSID value is present, load with PK
                    insStr = "INSERT INTO locus (mrna_acc, gene, class, snp_id) VALUES ('{0}', '{1}', '{2}', {3})".format(row[1], row[2], row[3], rsidList[row[0]])
                    lociInserts.append(insStr)
                
    # Data for reporting
    result.lociLoadEnd = time.time()
    result.totalLoci = len(lociInserts)
    
    # Create new cursor, enter loci data into pgsql
    cursor = postgresConnection.cursor()

    print "Chromosome " + str(curChr) + ". Inserting loci data."

    # Log current run start time and number of loci
    result.lociInsertStart = time.time()
    
    # Insert each locus
    for locus in lociInserts:
        cursor.execute(locus)
    
    # Commit data to pgsql
    postgresConnection.commit()
開發者ID:wadeschulz,項目名稱:research_snpdb,代碼行數:33,代碼來源:postgresql-loader.py


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