本文整理汇总了Python中Parser.Parser.get_model方法的典型用法代码示例。如果您正苦于以下问题：Python Parser.get_model方法的具体用法？Python Parser.get_model怎么用？Python Parser.get_model使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类Parser.Parser的用法示例。
在下文中一共展示了Parser.get_model方法的4个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: file_test
# 需要导入模块: from Parser import Parser [as 别名]
# 或者: from Parser.Parser import get_model [as 别名]
def file_test(request):
# Handle file upload
if request.method == 'POST':
form = AlgorithmRunForm(request.POST, request.FILES)
if form.is_valid():
out_file = File(open("./pgss15compbio/media/out_file.txt", "w+"))
p = Parser()
model = p.get_model(request.FILES['input_file'], out_file)
model.iterate()
new_algorithm_run = AlgorithmRun(input_file = request.FILES['input_file'],
output_file=out_file)
new_algorithm_run.save()
# Redirect to the document list after POST
h = HttpResponseRedirect("../../media/out_file.txt")
return h
else:
form = AlgorithmRunForm() # A empty, unbound form
# Load documents for the list page
algorithm_runs = AlgorithmRun.objects.all()
# Render list page with the documents and the form
return render_to_response(
'skeletonpages/file_test.html',
{'algorithm_runs': algorithm_runs, 'form': form},
context_instance=RequestContext(request)
)示例2: create_simulation
# 需要导入模块: from Parser import Parser [as 别名]
# 或者: from Parser.Parser import get_model [as 别名]
def create_simulation(request):
form = AlgorithmRunForm(request.POST, request.FILES)
if form.is_valid():
file_name = "./pgss15compbio/media/out_file_{}.csv".format( str(random())[2:] )
out_file = File(open(file_name, "w+"))
p = Parser()
model = p.get_model(request.FILES['input_file'], out_file)
model.iterate()
new_algorithm_run = AlgorithmRun(input_file = request.FILES['input_file'],
output_file = out_file, name=request.POST['name'],
description = request.POST['description'])
new_algorithm_run.save()
request.user.userprofile.algorithm_runs.add(new_algorithm_run)
request.user.userprofile.save()
output_file = new_algorithm_run.output_file
first_line = output_file.readline()
list_of_lists = []
for variable_name in first_line.strip().split(","):
list_of_lists.append([variable_name])
for line in output_file.readlines():
# ipdb.set_trace()
split_line = line.split(",")
for index, value in enumerate(split_line):
list_of_lists[index].append(float(value.rstrip()))
dictionary = {}
for sublist in list_of_lists:
dictionary.update( { sublist[0]: sublist[1:] } )
keys = []
for sublist in list_of_lists:
keys.append(sublist[0])
context = {'simulation': simulation, 'simulation_values': mark_safe(dictionary), 'variable_names': keys}
return render_to_response('skeletonpages/show_simulation.html',
context,
RequestContext(request)
)示例3: input
# 需要导入模块: from Parser import Parser [as 别名]
# 或者: from Parser.Parser import get_model [as 别名]
def input(request):
if request.method == 'POST':
form = AlgorithmRunForm(request.POST, request.FILES)
if form.is_valid():
out_file = File(open("./pgss15compbio/media/out_file.csv", "w+"))
p = Parser()
model = p.get_model(request.FILES['input_file'], out_file)
model.iterate()
new_algorithm_run = AlgorithmRun(input_file=request.FILES['input_file'],
output_file=out_file)
new_algorithm_run.save()
# Redirect to the document list after POST
h = HttpResponseRedirect("../../media/out_file.csv")
return h
else:
form = AlgorithmRunForm() # A empty, unbound form
context = {'active_tab': '#input-nav', 'form': form}
return render_to_response('skeletonpages/input.html', context, RequestContext(request))示例4: run_stoch_sim
# 需要导入模块: from Parser import Parser [as 别名]
# 或者: from Parser.Parser import get_model [as 别名]
def run_stoch_sim(inFileName, outFileName, timeout=-1, loggingfreq=100):
p = Parser()
model = p.get_model(open(inFileName, 'r'), open(outFileName,'w+'), timeout, loggingfreq)
model.iterate()