本文整理汇总了C#中ISequence.IsMarkedAsReverseComplement方法的典型用法代码示例。如果您正苦于以下问题：C# ISequence.IsMarkedAsReverseComplement方法的具体用法？C# ISequence.IsMarkedAsReverseComplement怎么用？C# ISequence.IsMarkedAsReverseComplement使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类ISequence的用法示例。
在下文中一共展示了ISequence.IsMarkedAsReverseComplement方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的C#代码示例。
示例1: WriteMums
private static void WriteMums(IEnumerable<Match> mums, ISequence refSequence, ISequence querySequence, CommandLineOptions myArgs)
{
// write the QuerySequenceId
string displayID = querySequence.ID;
Console.Write("> {0}", displayID);
if (myArgs.DisplayQueryLength)
{
Console.Write(" "+querySequence.Count);
}
Console.WriteLine();
bool isReverseComplement = myArgs.C && querySequence.IsMarkedAsReverseComplement();
// foreach (MaxUniqueMatch m in sortedMums)
// {
// Start is 1 based in literature but in programming (e.g. MaxUniqueMatch) they are 0 based.
// Add 1
foreach (Match match in mums)
{
Console.WriteLine(
"{0,8} {1,8} {2,8}",
match.ReferenceSequenceOffset + 1,
!isReverseComplement ? match.QuerySequenceOffset + 1 : querySequence.Count - match.QuerySequenceOffset,
match.Length);
if (myArgs.ShowMatchingString)
{
for (int i = 0; i < match.Length; ++i)
{
// mummer uses all lowercase and .NET Bio uses uppercase...convert on display
Console.Write(char.ToLowerInvariant((char)querySequence[match.QuerySequenceOffset + i]));
}
Console.WriteLine();
}
}
}