本文整理汇总了C#中ISequence.ConvertToString方法的典型用法代码示例。如果您正苦于以下问题:C# ISequence.ConvertToString方法的具体用法?C# ISequence.ConvertToString怎么用?C# ISequence.ConvertToString使用的例子?那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类ISequence
的用法示例。
在下文中一共展示了ISequence.ConvertToString方法的1个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的C#代码示例。
示例1: Create
/// <summary>
/// The create DNA sequence.
/// </summary>
/// <param name="sequence">
/// The common sequence.
/// </param>
/// <param name="fastaSequence">
/// Sequence as <see cref="ISequence"/>>.
/// </param>
/// <param name="partial">
/// The partial.
/// </param>
/// <exception cref="Exception">
/// Thrown if at least one element of new sequence is missing in db
/// or if sequence is empty or invalid.
/// </exception>
public void Create(CommonSequence sequence, ISequence fastaSequence, bool partial)
{
// TODO: fix it for batch import or remove fasta headers completely
string fastaHeader = ">" + fastaSequence.ID;
if (fastaHeader.Contains("Resource temporarily unavailable"))
{
throw new Exception("Sequence is empty or invalid (probably ncbi is not responding).");
}
string stringSequence = fastaSequence.ConvertToString().ToUpper();
var chain = new BaseChain(stringSequence);
if (!ElementRepository.ElementsInDb(chain.Alphabet, sequence.NotationId))
{
throw new Exception("At least one element of new sequence is invalid (not A, C, T, G or U).");
}
MatterRepository.CreateMatterFromSequence(sequence);
var alphabet = ElementRepository.ToDbElements(chain.Alphabet, sequence.NotationId, false);
Create(sequence, partial, alphabet, chain.Building);
}