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C++ Transition::createDefaultTerm方法代码示例

本文整理汇总了C++中Transition::createDefaultTerm方法的典型用法代码示例。如果您正苦于以下问题:C++ Transition::createDefaultTerm方法的具体用法?C++ Transition::createDefaultTerm怎么用?C++ Transition::createDefaultTerm使用的例子?那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在Transition的用法示例。


在下文中一共展示了Transition::createDefaultTerm方法的1个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的C++代码示例。

示例1: main


//.........这里部分代码省略.........
  //    SBMLNamespaces sbmlns(3,1,"qual",1,"QUAL");
  //

  SBMLNamespaces sbmlns(3,1,"qual",1);

  //
  // (NOTES) The above code creating an SBMLNamespaces object can be replaced 
  //         with one of the following other styles.
  //
  // (1) Creates an SBMLNamespace object with a SBML core namespace and then
  //     adds a qual package namespace to the object.
  //
  //         SBMLNamespaces sbmlns(3,1);
  //         sbmlns.addPkgNamespace("qual",1);
  //
  //          OR
  //
  //         SBMLNamespaces sbmlns(3,1);
  //         sbmlns.addNamespace(QualExtension::XmlnsL3V1V1,"qual");
  //
  // (2) Creates a QualPkgNamespaces object (SBMLNamespace derived class for
  //     qual package. The class is basically used for createing an SBase
  //     derived objects defined in the qual package) with the given SBML
  //     level, version, and package version
  //
  //        QualPkgNamespaces sbmlns(3,1,1);
  //     


  // create the document

  SBMLDocument *document = new SBMLDocument(&sbmlns);

  // mark qual as required

  document->setPackageRequired("qual", true);


  // create the Model

  Model* model=document->createModel();

  // create the Compartment

  Compartment* compartment = model->createCompartment();
  compartment->setId("c");
  compartment->setConstant(true);

  //
  // Get a QualModelPlugin object plugged in the model object.
  //
  // The type of the returned value of SBase::getPlugin() function is
  // SBasePlugin*, and thus the value needs to be casted for the
  // corresponding derived class.
  //
  QualModelPlugin* mplugin
    = static_cast<QualModelPlugin*>(model->getPlugin("qual"));

  // create the QualitativeSpecies
  QualitativeSpecies* qs = mplugin->createQualitativeSpecies();
  qs->setId("s1");
  qs->setCompartment("c");
  qs->setConstant(false);
  qs->setInitialLevel(1);
  qs->setMaxLevel(4);
  qs->setName("sss");

  // create the Transition
  Transition* t = mplugin->createTransition();
  t->setId("d");
  t->setSBOTerm(1);

  Input* i = t->createInput();
  i->setId("RD");
  i->setQualitativeSpecies("s1");
  i->setTransitionEffect(INPUT_TRANSITION_EFFECT_NONE);
  i->setSign(INPUT_SIGN_NEGATIVE);
  i->setThresholdLevel(2);
  i->setName("aa");

  Output* o = t->createOutput();
  o->setId("wd");
  o->setQualitativeSpecies("s1");
  o->setTransitionEffect(OUTPUT_TRANSITION_EFFECT_PRODUCTION);
  o->setOutputLevel(2);
  o->setName("aa");

  DefaultTerm* dt = t->createDefaultTerm();
  dt->setResultLevel(2) ;

  FunctionTerm* ft = t->createFunctionTerm();
  ASTNode* math = SBML_parseL3Formula("geq(s1, 2)");
  ft->setResultLevel(1);
  ft->setMath(math);
  
  writeSBML(document,"qual_example1.xml");
  delete document;

  return 0;
}
开发者ID:sys-bio,项目名称:libroadrunner-deps,代码行数:101,代码来源:qual_example1.cpp


注:本文中的Transition::createDefaultTerm方法示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台,相关代码片段筛选自各路编程大神贡献的开源项目,源码版权归原作者所有,传播和使用请参考对应项目的License;未经允许,请勿转载。