C++ Species::getName方法代码示例

void VideoWindow::loadSpeceis()
{
    Database db;
    QList<Species> species = db.getAllSpecies();
    QStringList completions;
    for(int l = 0; l < species.size(); l++){
        Species sp = species.at(l);
        QString name = sp.getName().toString();
        completions.push_back(name);
    }
    QCompleter *completer = new QCompleter(completions, this);
    completer->setCompletionMode(QCompleter::PopupCompletion);
    this->ui->species->setCompleter(completer);
}

int Database::insertSpecie(Species s)
{
    QVariant name = s.getName().toString().toLower();
    if(!this->specieExist(name)){
        this->query.prepare("INSERT INTO Species (name) VALUES (:name);");
        this->query.bindValue(":name",name);
        if(!this->query.exec()){
            this->showError(this->query.lastError());
            return -1;
        }
        return this->query.lastInsertId().toInt();
    }
    this->showError(QMessageBox::tr("Essa espécie já existe!"));
    return 0;
}

int Database::editSpecies(Species s)
{
    QVariant name = s.getName().toString().toLower();
    if(this->specieExist(name) > 0){
        this->showError(QMessageBox::tr("Esta espécie já existe"));
        return 0;
    }
    if(this->specieExist(name) <= 0){
        this->query.prepare("UPDATE Species SET name=? WHERE Species.id=?;");
        this->query.addBindValue(name);
        this->query.addBindValue(s.getId());
        if(!this->query.exec()){
            this->showError(this->query.lastError());
            return -1;
        }
        return 1;
    }
    QMessageBox::information(0, QMessageBox::tr("Erro"),QMessageBox::tr("Espécie não encontrada!"));
    return 0;
}

/* create MOLECULE  */
const SbmlReader::sbmlStr_mooseId SbmlReader::createMolecule( map< string,Id > &comptSidMIdMap) {
    Shell* shell = reinterpret_cast< Shell* >( Id().eref().data() );
    map< string, Id >molSidcmptMIdMap;
    double transvalue = 0.0;
    int num_species = model_->getNumSpecies();

    if (num_species == 0) {
        baseId = Id();
        errorFlag_ = true;
        return molSidcmptMIdMap;
    }

    for ( int sindex = 0; sindex < num_species; sindex++ ) {
        Species* spe = model_->getSpecies(sindex);
        if (!spe) {
            continue;
        }
        std::string compt = "";
        if ( spe->isSetCompartment() ) {
            compt = spe->getCompartment();
        }
        if (compt.length()< 1) {
            //cout << "compt is empty for species "<< sindex << endl;
            continue;
        }
        string id = spe->getId();
        if (id.length() < 1) {
            continue;
        }
        std::string name = "";
        if ( spe->isSetName() ) {
            name = spe->getName();
            name = nameString(name);
        }
        if (name.empty())
            name = id;

        double initvalue =0.0;
        if ( spe->isSetInitialConcentration() )
            initvalue = spe->getInitialConcentration();
        else if ( spe->isSetInitialAmount() )
            initvalue = spe->getInitialAmount() ;
        else {
            unsigned int nr = model_->getNumRules();
            bool found = false;
            for ( unsigned int r = 0; r < nr; r++ ) {
                Rule * rule = model_->getRule(r);
                bool assignRule = rule->isAssignment();
                if ( assignRule ) {
                    string rule_variable = rule->getVariable();
                    if (rule_variable.compare(id) == 0) {
                        found = true;
                        break;
                    }
                }
            }
            if (found == false) {
                cout << "Invalid SBML: Either initialConcentration or initialAmount must be set or it should be found in assignmentRule but non happening for " << spe->getName() <<endl;
                return molSidcmptMIdMap;
            }
        }
        Id comptEl = comptSidMIdMap[compt];
        Id meshEntry = Neutral::child( comptEl.eref(), "mesh" );
        bool constant = spe->getConstant();
        bool boundaryCondition = spe->getBoundaryCondition();
        if (boundaryCondition == true)
            cout << "Pools having BoundaryCondition true " << name <<endl;
        Id pool;
        //If constant is true then its equivalent to BuffPool in moose
        if (constant == true)
            //if( (boundaryCondition == true) && (constant==false))
            pool = shell->doCreate("BufPool",comptEl,name,1);
        else
            pool = shell->doCreate("Pool", comptEl, name ,1);
        molSidcmptMIdMap[id] = comptEl;
        //Map to Molecule SBML id to Moose Id
        molSidMIdMap_[id] = pool;

        //shell->doAddMsg( "OneToOne",pool, "mesh", meshEntry, "mesh" );
        bool bcondition = spe->getBoundaryCondition();
        if ( constant == true && bcondition == false)
            cout <<"The species "<< name << " should not appear in reactant or product as per sbml Rules"<< endl;

        unsigned int spatialDimen =Field< unsigned int >::get( comptEl, "numDimensions");

        UnitDefinition * ud = spe->getDerivedUnitDefinition();
        assert(ud != NULL);
        bool hasonlySubUnit = spe->getHasOnlySubstanceUnits();

        //double v = Field< double >::get( comptEl.path(), "volume" );
        transvalue = transformUnits(1,ud,"substance",hasonlySubUnit);
        if (hasonlySubUnit) {
            // In Moose, no. of molecules (nInit) and unit is "item"
            if (spatialDimen > 0 && spe->isSetInitialAmount() ) {
                //transvalue *= initvalue;
                initvalue *=transvalue;
                Field < double> :: set( pool, "nInit", initvalue);
            }
        } else {
//.........这里部分代码省略.........