本文整理匯總了Python中HelperFunctions.gatherCounts方法的典型用法代碼示例。如果您正苦於以下問題：Python HelperFunctions.gatherCounts方法的具體用法？Python HelperFunctions.gatherCounts怎麽用？Python HelperFunctions.gatherCounts使用的例子？那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在類HelperFunctions的用法示例。
在下文中一共展示了HelperFunctions.gatherCounts方法的1個代碼示例，這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚，您的評價將有助於係統推薦出更棒的Python代碼示例。
示例1: gatherContributions
# 需要導入模塊: import HelperFunctions [as 別名]
# 或者: from HelperFunctions import gatherCounts [as 別名]
def gatherContributions(aminoSeqList):
""" Takes a list of amino acids and returns a list of dictionaries where every entry in the dictionary
is the base and the contribution of that base to the information for that position
Args:
aminoSeqList (string): List of amino acids
Returns:
Dictionary: List of Dictionaries
"""
countsList = HelperFunctions.gatherCounts(aminoSeqList)
listOfDicts = [0 for x in range(len(countsList))]
index = 0
for oneCountList in countsList:
probabilityPerCount = HelperFunctions.calcProbs(oneCountList)
probabilityList = [value for key, value in probabilityPerCount.items()]
entropy = HelperFunctions.entropy(probabilityList)
info = HelperFunctions.information(entropy, 4)
for key, value in probabilityPerCount.items():
if (probabilityPerCount[key] == value):
probabilityPerCount[key] = value * info
listOfDicts[index] = probabilityPerCount
index = index + 1
return listOfDicts