Python connector.Connector类代码示例

    def __init__(self, train_data, valid_data, batch_size, word_dropout_prob, device_id):
        self.train_data = HomogeneousDataIterator(train_data, batch_size, randomize=True, infinite=True)
        self.valid_data = HomogeneousDataIterator(valid_data, batch_size)
        self.train_data_iterator = iter(self.train_data)
        self.valid_data_iterator = iter(self.valid_data)
        self.word_keep_prob = 1.0 - word_dropout_prob
        self.rnd = RandomState(47571)
        self.unk_idx = word_to_idx['<UNK>']

        self.context = Context(device_id)
        c = Counter([len(line) for line in chain(train_data, valid_data)])
        print c.most_common()
        max_len = max([len(line) for line in chain(train_data, valid_data)])

        self.enc_x = Connector(Matrix.empty(batch_size, max_len, 'int', device_id))
        self.enc_lengths = Matrix.empty(self.enc_x.nrows, 1, 'int', device_id)
        self._enc_mask = Matrix.empty(self.enc_x.nrows, self.enc_x.ncols, 'float', device_id)
        self.enc_mask = List([Connector(self._enc_mask[:, i]) for i in xrange(max_len)], self.enc_x.ncols)

        self.dec_x = Connector(Matrix.empty(batch_size, max_len + 1, 'int', device_id))
        self._dec_y = Matrix.empty(batch_size, max_len + 1, 'int', device_id)
        self.dec_y = List([Connector(self._dec_y[:, i]) for i in xrange(max_len + 1)], self._dec_y.ncols)
        self.dec_lengths = Matrix.empty(self.dec_x.nrows, 1, 'int', device_id)
        self._dec_mask = Matrix.empty(self.dec_x.nrows, self.dec_x.ncols, 'float', device_id)
        self.dec_mask = List([Connector(self._dec_mask[:, i]) for i in xrange(max_len + 1)], self.dec_x.ncols)

        self.blocking_contexts = None
        self.training_mode = True

    def __init__(self, W, b, x, device_id=None):
        self.f_context = Context(device_id)
        device_id = self.f_context.device_id

        if W.bpropagable:
            self.W, self.dL_dW = W.register_usage(device_id, device_id)
        else:
            self.W = W.register_usage(device_id)
        if b:
            if b.bpropagable:
                self.b, self.dL_db = b.register_usage(device_id, device_id)
                self.ones = Matrix.empty(x.nrows, 1, self.b.dtype, device_id)
                self.ones.sync_fill(1.0)
            else:
                self.b = b.register_usage(device_id)
        if x.bpropagable:
            self.x, self.dL_dx = x.register_usage(device_id, device_id)
        else:
            self.x = x.register_usage(device_id)

        output = Matrix.empty(x.nrows, self.W.ncols, device_id=device_id)
        self.learning = hasattr(self, 'dL_dW') or hasattr(self, 'dL_db') or \
                        hasattr(self, 'dL_dx')
        if self.learning:
            self.b_context = Context(device_id)
            self.output = Connector(output, device_id)
        else:
            self.output = Connector(output)

class LastSelectorBlock(object):
    """
    TODO(igor).

    Parameters
    ----------
    x : Matrix (GpuMatrix or CpuMatrix)

    """
    def __init__(self, x):
        device_id = x[0].device_id
        learning = x[0].bpropagable
        self.context = Context(device_id)
        self.output = Matrix.empty_like(x[0])
        self.output = Connector(self.output, device_id if learning else None)
        if learning:
            self.x, self.dL_dx = izip(*x.register_usage(device_id, device_id))
        else:
            self.x = x.register_usage(device_id)
        self.last_idx = x.length - 1

    def fprop(self):
        self.output.assign(self.context, self.x[self.last_idx])
        self.output.fprop()

    def bprop(self):
        self.dL_dx[self.last_idx].add(self.context, self.output.backward_matrix)

class ArgmaxBlock(object):
    """
    Determines argmax values along the specified ``axis`` in the input matrix.
    The block returns a vector (matrix with one of its dimensions equals 1) of
    argmax values.


    Parameters
    ----------
    x : Matrix (GpuMatrix or CpuMatrix)
        Block's input
    axis : int
        Axis along which argmax is determined
    device_id : int
        Defines the device's id on which the computation will take place

    Returns
    -------
    vector
        A vector containing argmax values (e.g. argmax for each row if axis == 1).
    """
    def __init__(self, x, axis, device_id=None):
        if axis != 1:
            raise NotImplementedError
        self.axis = axis
        self.context = Context(device_id)
        device_id = self.context.device_id

        self.x = x.register_usage(device_id)
        self.output = Connector(Matrix.empty(x.nrows, 1, x.dtype, device_id))

    def fprop(self):
        self.x.argmax(self.context, self.output, self.axis)
        self.output.fprop()

class RepeatBlock(object):
    def __init__(self, x, repeats, axis=None, device_id=None):
        self.context = Context(device_id)
        device_id = self.context.device_id
        self.repeats = repeats
        self.axis = axis
        learning = x.bpropagable
        if learning:
            self.x, self.dL_dx = x.register_usage(device_id, device_id)
        else:
            self.x = x.register_usage(device_id)
        if axis == 0:
            self.output = Matrix.empty(x.nrows * repeats, x.ncols, x.dtype, device_id)
        elif axis == 1:
            self.output = Matrix.empty(x.nrows, x.ncols * repeats, x.dtype, device_id)
        else:
            raise ValueError('TODO')
        self.output = Connector(self.output, device_id if learning else None)

    def fprop(self):
        self.output.assign_repeat(self.context, self.x, self.repeats, self.axis)
        self.output.fprop()

    def bprop(self):
        if hasattr(self, 'dL_dx'):
            self.dL_dx.add_repeat_derivative(self.context, self.output.backward_matrix, self.repeats, self.axis)

class NonlinearityBlock(object):
    """
    Applies nonlinear functions (``sigmoid``, ``tahn``, ``relu``) on input.

    Parameters
    ----------
    x : Matrix (GpuMatrix or CpuMatrix)
    nonlinearity : string
    device_id : int
    """

    def __init__(self, x, nonlinearity, device_id=None):
        """


        """
        self.f_context = Context(device_id)
        device_id = self.f_context.device_id
        self.learning = x.bpropagable
        if self.learning:
            self.b_context = Context(device_id)
            self.x, self.dL_dx = x.register_usage(device_id, device_id)
            self._df_dpref = Matrix.empty_like(self.x, device_id)
        else:
            self.x = x.register_usage(device_id)
        output = Matrix.empty_like(x, device_id)
        self.output = Connector(output, device_id if self.learning else None)
        if nonlinearity == "sigmoid":
            self.f = self.x.sigmoid
        elif nonlinearity == "tanh":
            self.f = self.x.tanh
        elif nonlinearity == "relu":
            self.f = self.x.relu
        elif nonlinearity == "softmax":
            raise ValueError("For softmax nonlinearity use SoftmaxBlock!")
        else:
            raise ValueError("TODO!")
        self.training_mode = True

    @property
    def df_dpref(self):
        if self.training_mode and self.learning:
            return self._df_dpref

    def fprop(self):
        self.f(self.f_context, self.output, self.df_dpref)
        self.output.fprop()

    def bprop(self):
        if hasattr(self, "dL_dx"):
            # dL/dpref = dL/df .* df/dpref
            dL_df = self.output.backward_matrix
            self.dL_dx.add_hprod(self.b_context, dL_df, self.df_dpref)

    def set_training_mode(self):
        self.training_mode = True

    def set_testing_mode(self):
        self.training_mode = False

class PtbMiniBatchesGenerator(object):
    def __init__(self, ptb_train, ptb_valid, batch_size, sentence_max_len, device_id):
        self.blocking_contexts = None
        self.context = Context(device_id)
        device_id = self.context.device_id
        self.train_offsets = HomogeneousDataGenerator(ptb_train, batch_size, sentence_max_len, randomize=True, infinite=True)
        self.valid_offsets = HomogeneousDataGenerator(ptb_valid, batch_size, sentence_max_len)

        train_sentences = np.array([self.train_offsets.flatten_sentences])
        valid_sentences = np.array([self.valid_offsets.flatten_sentences])
        self.train_sents = Matrix.from_npa(train_sentences, 'int', device_id)
        self.valid_sents = Matrix.from_npa(valid_sentences, 'int', device_id)
        self._sent_lengths = np.empty((batch_size, 1), dtype=np.int32, order='F')[...]
        self.sent_lengths = Matrix.from_npa(self._sent_lengths, device_id=device_id)

        sentence_batch = Matrix.empty(batch_size, sentence_max_len, 'int', device_id)
        self.sentence_batch = Connector(sentence_batch, self.context)
        self.sentence_batch.sync_fill(0)

        self._mask = Matrix.empty(sentence_batch.nrows, self.sentence_batch.ncols, 'float', device_id)
        self.mask = List([Connector(self._mask[:, i]) for i in xrange(sentence_max_len)], self.sentence_batch.ncols)
        self.train_offsets_iterator = iter(self.train_offsets)
        self.valid_offsets_iterator = iter(self.valid_offsets)
        self.training_mode = True

    def set_training_mode(self):
        self.training_mode = True

    def set_testing_mode(self):
        self.training_mode = False

    def fprop(self):
        if self.training_mode:
            offsets = next(self.train_offsets_iterator)
            sents = self.train_sents
        else:
            try:
                offsets = next(self.valid_offsets_iterator)
                sents = self.valid_sents
            except StopIteration as e:
                self.valid_offsets_iterator = iter(self.valid_offsets)
                raise e
        self.context.wait(*self.blocking_contexts)
        self._sent_lengths = self._sent_lengths.base[:len(offsets)]
        self.sentence_batch.nrows = len(offsets)
        for k, offset in enumerate(offsets):
            self.sentence_batch[k].assign(self.context, sents[:, offset[0]:offset[1]])
            self._sent_lengths[k] = offset[1] - offset[0]
        max_sent_len = int(np.max(self._sent_lengths))
        self.sentence_batch.last_modification_context = self.context
        self.sentence_batch.ncols = max_sent_len
        self.sent_lengths.assign_npa(self.context, self._sent_lengths)
        self._mask.mask_column_numbers_row_wise(self.context, self.sent_lengths)
        for e in self.mask:
            e.last_modification_context = self.context
        self.sentence_batch.fprop()
        self.mask.fprop()

    def test_bprop_vector(self):
        r = []
        for _ in xrange(self.N):
            embd_dim = self.rng.random_integers(10000)
            batch_size, output_dim = self.rng.random_integers(2000, size=2)
            W = self.get_orthogonal_matrix(embd_dim, output_dim)
            row_idxs = self.rng.randint(embd_dim, size=(batch_size, 1)).astype(np.int32)
            true_labels = self.rng.randint(output_dim, size=(batch_size, 1)).astype(np.int32)
            device_id = 0

            output = {}
            for processor_type in ['gpu', 'cpu']:
                quagga.processor_type = processor_type
                qrow_idxs = Connector(Matrix.from_npa(row_idxs))
                qtrue_labels = Connector(Matrix.from_npa(true_labels))
                qW = Connector(Matrix.from_npa(W), device_id)
                row_slicing_block = RowSlicingBlock(qW, qrow_idxs)
                sce_block = SoftmaxCeBlock(row_slicing_block.output, qtrue_labels)
                qW.fprop()
                qrow_idxs.fprop()
                row_slicing_block.fprop()
                sce_block.fprop()
                sce_block.bprop()
                row_slicing_block.bprop()
                qW.add(Context(), qW.backward_matrix)
                output[processor_type] = qW.to_host()

            r.append(np.allclose(output['gpu'], output['cpu']))

        self.assertEqual(sum(r), len(r))

    def __init__(self, R, b, grad_clipping, mask, prev_c, prev_h, device_id=None):
        self.f_context = Context(device_id)
        device_id = self.f_context.device_id
        if R.bpropagable:
            self.R, self.dL_dR = R.register_usage(device_id, device_id)
            self.R_b_context = Context(device_id)
        else:
            self.R = R.register_usage(device_id)
        if b.bpropagable:
            self.b, self.dL_db = b.register_usage(device_id, device_id)
            self.b_b_context = Context(device_id)
        else:
            self.b = b.register_usage(device_id)
        self.grad_clipping = grad_clipping
        if mask:
            self.mask = mask.register_usage(device_id)
        if prev_c.bpropagable:
            self.prev_c, self.dL_dprev_c = prev_c.register_usage(device_id, device_id)
        else:
            self.prev_c = prev_c.register_usage(device_id)
        if prev_h.bpropagable:
            self.prev_h, self.dL_dprev_h = prev_h.register_usage(device_id, device_id)
        else:
            self.prev_h = prev_h.register_usage(device_id)
        self.learning = R.bpropagable or prev_c.bpropagable or prev_h.bpropagable
        if self.learning:
            self.b_context = Context(device_id)

        dim = self.R.nrows
        batch_size = self.prev_c.nrows

        self.zifo = Matrix.empty(batch_size, 4 * dim, device_id=device_id)
        self.z = self.zifo[:, 0*dim:1*dim]
        self.i = self.zifo[:, 1*dim:2*dim]
        self.f = self.zifo[:, 2*dim:3*dim]
        self.o = self.zifo[:, 3*dim:4*dim]
        self.c = Matrix.empty_like(self.prev_c, device_id)
        self.c = Connector(self.c, device_id if self.learning else None)
        self.tanh_c = Matrix.empty_like(self.c, device_id)
        self.h = Matrix.empty_like(self.c, device_id)
        self.h = Connector(self.h, device_id if self.learning else None)

        if self.learning:
            self._dzifo_dpre_zifo = Matrix.empty_like(self.zifo)
            self.dz_dpre_z = self._dzifo_dpre_zifo[:, 0*dim:1*dim]
            self.di_dpre_i = self._dzifo_dpre_zifo[:, 1*dim:2*dim]
            self.df_dpre_f = self._dzifo_dpre_zifo[:, 2*dim:3*dim]
            self.do_dpre_o = self._dzifo_dpre_zifo[:, 3*dim:4*dim]
            self.dL_dpre_zifo = self._dzifo_dpre_zifo
            self.dL_dpre_z = self.dz_dpre_z
            self.dL_dpre_i = self.di_dpre_i
            self.dL_dpre_f = self.df_dpre_f
            self.dL_dpre_o = self.do_dpre_o
            self._dtanh_c_dc = Matrix.empty_like(self.c)

class SoftmaxCeBlock(object):
    """
    Softmax nonlinearity with mean cross entropy loss
    """

    def __init__(self, x, true_labels, mask=None, device_id=None):
        self.context = Context(device_id)
        device_id = self.context.device_id
        if x.bpropagable:
            self.x, self.dL_dx = x.register_usage(device_id, device_id)
        else:
            self.x = x.register_usage(device_id)
        self.true_labels = true_labels.register_usage(device_id)
        if mask:
            self.mask = mask.register_usage(device_id)
        self.probs = Connector(Matrix.empty_like(self.x))
        self.loss = None

    def fprop(self):
        self.x.softmax(self.context, self.probs)
        self.probs.fprop()

    def bprop(self):
        if not hasattr(self, 'dL_dx'):
            return
        # error = (probs - true_labels) / M
        if self.true_labels.dtype == 'int':
            self.dL_dx.add_softmax_ce_derivative(self.context, self.probs, self.true_labels)
        else:
            self.dL_dx.add_scaled_subtraction(self.context, 1. / self.probs.nrows, self.probs, self.true_labels)
        if hasattr(self, 'mask'):
            self.dL_dx.hprod(self.context, self.mask)

    def calculate_loss(self, context):
        true_labels_np = self.true_labels.to_host(context)
        probs_np = self.probs.to_host(context)
        if hasattr(self, 'mask'):
            mask = self.mask.to_host(context)
            context.add_callback(self._calculate_ce_loss, true_labels_np, probs_np, mask)
        else:
            context.add_callback(self._calculate_ce_loss, true_labels_np, probs_np)

    def _calculate_ce_loss(self, true_labels_np, probs_np, mask=None):
        if self.true_labels.dtype == 'int':
            idxs = range(probs_np.shape[0]), true_labels_np.flatten()
            logs = np.log(probs_np[idxs] + 1e-20)
        else:
            logs = np.log(np.sum(true_labels_np * probs_np, axis=1) + 1e-20)
        if mask is not None:
            logs *= mask[:, 0]
            self.loss = - np.sum(logs) / np.sum(mask)
        else:
            self.loss = - np.mean(logs)

class DataBlock(object):
    def __init__(self, word_to_idx, device_id):
        self.context = Context(device_id)
        device_id = self.context.device_id
        self.word_idx = Connector(Matrix.empty(1, 1, 'int', device_id))
        self.word_to_idx = word_to_idx
        self.word = None

    def fprop(self):
        word_npa = np.zeros((1, 1), np.int32, 'F')
        word_npa[0][0] = self.word_to_idx[self.word] if self.word in self.word_to_idx else self.word_to_idx['<UNK>']
        self.word_idx.assign_npa(self.context, word_npa)
        self.word_idx.fprop()

class DataBlock(object):
    def __init__(self, char_to_idx, device_id):
        self.context = Context(device_id)
        device_id = self.context.device_id
        self.char_idx = Connector(Matrix.empty(1, 1, 'int', device_id))
        self.char_to_idx = char_to_idx
        self.char = None

    def fprop(self):
        char_npa = np.zeros((1, 1), np.int32, 'F')
        char_npa[0][0] = self.char_to_idx[self.char] if self.char in self.char_to_idx else self.char_to_idx['<unk>']
        self.char_idx.assign_npa(self.context, char_npa)
        self.char_idx.fprop()

class DropoutBlock(object):
    """
    Sets elements of input matrix ``x`` to zero with probability
    ``dropout_prob`` in training mode. Scales ``x`` by factor of
    ``1-dropout_prob`` during in testing mode.

    Parameters
    ----------
    dropout_prob : float
    x : Matrix (GpuMatrix or CpuMatrix)
    seed : int
    device_id : int
        Defines the device's id on which the computation will take place

    Notes
    -----
    The dropout block is a regularizer that randomly sets input values to zero
    in training mode. This procedure is supposed to improve generalization.
    During testing, the dropout block scales input values.
    """
    def __init__(self, dropout_prob, x, seed=42, device_id=None):
        self.dropout_prob = dropout_prob
        self.f_context = Context(device_id)
        device_id = self.f_context.device_id
        self.generator = Matrix.get_random_generator(seed)
        if x.bpropagable:
            self.b_context = Context(device_id)
            self.x, self.dL_dx = x.register_usage(device_id, device_id)
        else:
            self.x = x.register_usage(device_id)
        self.output = Matrix.empty_like(self.x)
        self.output = Connector(self.output, device_id if x.bpropagable else None)
        self.training_mode = True

    def fprop(self):
        if self.training_mode:
            self.x.dropout(self.f_context, self.generator, self.dropout_prob, self.output)
        else:
            self.x.scale(self.f_context, 1.0 - self.dropout_prob, self.output)
        self.output.fprop()

    def bprop(self):
        if hasattr(self, 'dL_dx') and self.training_mode:
            dL_doutput = self.output.backward_matrix
            self.dL_dx.add_mask_zeros(self.b_context, dL_doutput, self.output)

    def set_training_mode(self):
        self.training_mode = True

    def set_testing_mode(self):
        self.training_mode = False

class AttentionBlock(object):
    """
    Location based attention block
    out = sum_{i=1}^{T}a_i * h_i
    a_i = softmax(h_i * u)
    """
    def __init__(self, matrices, u, mask=None, device_id=None):
        self.context = Context(device_id)
        device_id = self.context.device_id
        self.output = Matrix.empty_like(matrices[0], device_id)
        learning = matrices[0].bpropagable or u.bpropagable
        self.output = Connector(self.output, device_id if learning else None)
        if matrices[0].bpropagable:
            self.matrices, self.dL_dmatrices = \
                izip(*matrices.register_usage(device_id, device_id))
        else:
            self.matrices = matrices.register_usage(device_id)
        self.length = matrices.length
        if u.bpropagable:
            self.u, self.dL_du = u.register_usage(device_id, device_id)
        else:
            self.u = u.register_usage(device_id)
        if mask:
            self.mask = mask.register_usage(device_id)
        self.a = Matrix.empty(matrices[0].nrows, matrices.length,
                              'float', device_id)
        self.dL_dpre_a = Matrix.empty_like(self.a)
        self.a_cols = [self.a[:, i] for i in xrange(len(self.matrices))]

    def fprop(self):
        for i in xrange(self.length):
            self.a_cols[i].assign_dot(self.context, self.matrices[i], self.u)
        if hasattr(self, 'mask'):
            self.a.fill(self.context, -3.402823466e+38, self.mask, 0.0)
        self.a.softmax(self.context, self.a)
        self.output.assign_sequential_weighted_sum(self.context, self.a,
                                                   self.matrices[:self.length])
        self.output.fprop()

    def bprop(self):
        dL_doutput = self.output.backward_matrix
        self.dL_dpre_a.assign_dL_dpre_a(self.context, dL_doutput, self.a,
                                        self.matrices[:self.length])
        if hasattr(self, 'dL_dmatrices'):
            Matrix.add_attention_tile(self.context, dL_doutput, self.a,
                                      self.dL_dpre_a, self.u,
                                      self.dL_dmatrices[:self.length])
        if hasattr(self, 'dL_du'):
            self.dL_du.add_attention_derivative(self.context, self.dL_dpre_a,
                                                self.matrices[:self.length])

class SigmoidCeBlock(object):
    """
    Sigmoid nonlinearity with mean cross entropy loss
    """

    def __init__(self, x, true_labels, mask=None, device_id=None):
        self.context = Context(device_id)
        device_id = self.context.device_id
        if x.bpropagable:
            self.x, self.dL_dx = x.register_usage(device_id, device_id)
        else:
            self.x = x.register_usage(device_id)
        self.true_labels = true_labels.register_usage(device_id)
        if mask:
            self.mask = mask.register_usage(device_id)
        self.probs = Connector(Matrix.empty_like(self.x))
        self.loss = None

    def fprop(self):
        self.x.sigmoid(self.context, self.probs)
        self.probs.fprop()

    def bprop(self):
        # error = (probs - true_labels) / M
        self.dL_dx.add_scaled_subtraction(self.context,
                                          1. / float(self.probs.nrows),
                                          self.probs, self.true_labels)
        if hasattr(self, 'mask'):
            self.dL_dx.hprod(self.context, self.mask)

    def calculate_loss(self, context):
        true_labels_np = self.true_labels.to_host(context)
        probs_np = self.probs.to_host(context)
        if hasattr(self, 'mask'):
            mask = self.mask.to_host(context)
            context.add_callback(self._calculate_ce_loss,
                                 true_labels_np, probs_np, mask)
        else:
            context.add_callback(self._calculate_ce_loss,
                                 true_labels_np, probs_np)

    def _calculate_ce_loss(self, true_labels_np, probs_np, mask=None):
        logs = true_labels_np * np.log(probs_np + 1e-20) + \
               (1.0 - true_labels_np) * np.log(1. - probs_np + 1e-20)
        if mask is not None:
            logs *= mask
            self.loss = - np.sum(logs) / (np.sum(mask) * logs.shape[1])
        else:
            self.loss = - np.mean(logs)