本文整理汇总了Python中pbcore.io.SubreadSet.loadMetadata方法的典型用法代码示例。如果您正苦于以下问题：Python SubreadSet.loadMetadata方法的具体用法？Python SubreadSet.loadMetadata怎么用？Python SubreadSet.loadMetadata使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类pbcore.io.SubreadSet的用法示例。
在下文中一共展示了SubreadSet.loadMetadata方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: test_loadMetadata
# 需要导入模块: from pbcore.io import SubreadSet [as 别名]
# 或者: from pbcore.io.SubreadSet import loadMetadata [as 别名]
def test_loadMetadata(self):
aln = AlignmentSet(data.getXml(no=8))
self.assertFalse(aln.metadata.collections)
aln.loadMetadata('/pbi/dept/secondary/siv/testdata/'
'SA3-Sequel/lambda/roche_SAT/'
'm54013_151205_032353.run.metadata.xml')
self.assertTrue(aln.metadata.collections)
sset_fn = ('/pbi/dept/secondary/siv/testdata/'
'SA3-Sequel/lambda/roche_SAT/'
'm54013_151205_032353.subreadset.xml')
sset = SubreadSet(sset_fn)
orig_metadata = copy.deepcopy(sset.metadata)
sset.metadata.collections = None
self.assertFalse(sset.metadata.collections)
sset.loadMetadata('/pbi/dept/secondary/siv/testdata/'
'SA3-Sequel/lambda/roche_SAT/'
'm54013_151205_032353.run.metadata.xml')
stack = zip(sset.metadata, orig_metadata)
fn = tempfile.NamedTemporaryFile(suffix=".subreadset.xml").name
sset.write(fn)
validateFile(fn)
validateFile(sset_fn)
self.assertEqual(sset.metadata, orig_metadata)
# load the wrong thing...
sset_fn = ('/pbi/dept/secondary/siv/testdata/'
'SA3-Sequel/lambda/roche_SAT/'
'm54013_151205_032353.subreadset.xml')
sset = SubreadSet(sset_fn)
orig_metadata = copy.deepcopy(sset.metadata)
sset.metadata.collections = None
self.assertFalse(sset.metadata.collections)
with self.assertRaises(InvalidDataSetIOError):
sset.loadMetadata('/pbi/dept/secondary/siv/testdata/'
'SA3-Sequel/lambda/roche_SAT/'
'm54013_151205_032353.sts.xml')