本文整理汇总了Python中paleomix.common.formats.msa.MSA.reduce方法的典型用法代码示例。如果您正苦于以下问题：Python MSA.reduce方法的具体用法？Python MSA.reduce怎么用？Python MSA.reduce使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类paleomix.common.formats.msa.MSA的用法示例。
在下文中一共展示了MSA.reduce方法的3个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: test_msa_reduce__multiple_empty_column__all_empty_column_are_removed
# 需要导入模块: from paleomix.common.formats.msa import MSA [as 别名]
# 或者: from paleomix.common.formats.msa.MSA import reduce [as 别名]
def test_msa_reduce__multiple_empty_column__all_empty_column_are_removed():
fa_1 = FASTA("Name_A", "Meta_A", "-AnTN")
fa_2 = FASTA("Name_B", "Meta_B", "NC-NN")
initial = MSA([fa_1, fa_2])
fa_reduced_1 = FASTA("Name_A", "Meta_A", "AT")
fa_reduced_2 = FASTA("Name_B", "Meta_B", "CN")
expected = MSA([fa_reduced_1, fa_reduced_2])
assert_equal(initial.reduce(), expected)示例2: test_msa_reduce__only_empty_column__none_is_returned
# 需要导入模块: from paleomix.common.formats.msa import MSA [as 别名]
# 或者: from paleomix.common.formats.msa.MSA import reduce [as 别名]
def test_msa_reduce__only_empty_column__none_is_returned():
fa_1 = FASTA("Name_A", "Meta_A", "---Nn")
fa_2 = FASTA("Name_B", "Meta_B", "Nn--N")
initial = MSA([fa_1, fa_2])
assert_equal(initial.reduce(), None)示例3: test_msa_reduce__no_empty_columns__no_columns_are_removed
# 需要导入模块: from paleomix.common.formats.msa import MSA [as 别名]
# 或者: from paleomix.common.formats.msa.MSA import reduce [as 别名]
def test_msa_reduce__no_empty_columns__no_columns_are_removed():
fa_1 = FASTA("Name_A", "Meta_A", "ACnT")
fa_2 = FASTA("Name_B", "Meta_B", "C-TN")
initial = MSA([fa_1, fa_2])
expected = MSA([fa_1, fa_2])
assert_equal(initial.reduce(), expected)