本文整理汇总了Python中dax.XnatUtils.list_project_assessors方法的典型用法代码示例。如果您正苦于以下问题：Python XnatUtils.list_project_assessors方法的具体用法？Python XnatUtils.list_project_assessors怎么用？Python XnatUtils.list_project_assessors使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类dax.XnatUtils的用法示例。
在下文中一共展示了XnatUtils.list_project_assessors方法的4个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1:
# 需要导入模块: from dax import XnatUtils [as 别名]
# 或者: from dax.XnatUtils import list_project_assessors [as 别名]
HOST = 'http://cmic-xnat.cs.ucl.ac.uk'
PROJECT = 'Prisma_upgrade'
OLD_RESOURCE = 'VOLUME'
NEW_RESOURCE = 'STATS'
ASSESSOR = None
TMP_DIR = '/Users/byvernault/data/tempGIF/'
try:
xnat = XnatUtils.get_interface(host=HOST)
if ASSESSOR:
li_assessors = [XnatUtils.select_assessor(xnat, ASSESSOR)]
sys.stdout.write('Renaming resources %s to %s for assessor %s'
% (OLD_RESOURCE, NEW_RESOURCE, ASSESSOR))
else:
li_assessors = XnatUtils.list_project_assessors(xnat, PROJECT)
sys.stdout.write('Renaming resources %s to %s for assessor type %s\n'
% (OLD_RESOURCE, NEW_RESOURCE, ASSESSOR_TYPE))
for assessor in li_assessors:
sys.stdout.write(' - assessor: %s ...\n' % assessor['label'])
assessors = XnatUtils.get_full_object(xnat, assessor)
old_res = assessors.resource(OLD_RESOURCE)
files = None
if old_res.exists():
files = XnatUtils.download_files_from_obj(TMP_DIR, old_res)
if files:
new_res = assessors.resource(NEW_RESOURCE)
XnatUtils.upload_files_to_obj(files, new_res)
if new_res.exists():
old_res.delete()示例2: xnat
# 需要导入模块: from dax import XnatUtils [as 别名]
# 或者: from dax.XnatUtils import list_project_assessors [as 别名]
HOST = ARGS.host
else:
HOST = os.environ['XNAT_HOST']
if ARGS.username:
MSG = ("Please provide the password for user <%s> on xnat(%s):"
% (ARGS.username, HOST))
PWD = getpass.getpass(prompt=MSG)
else:
PWD = None
if not os.path.isdir(ARGS.tmpdir):
os.makedirs(ARGS.tmpdir)
print 'INFO: connection to xnat <%s>:' % (HOST)
XNAT = XnatUtils.get_interface(host=ARGS.host, user=ARGS.username,
pwd=PWD)
li_assessors = XnatUtils.list_project_assessors(XNAT, ARGS.project)
li_assessors = XnatUtils.filter_list_dicts_regex(
li_assessors, 'proctype',
['GIF_Parcellation_v2'])
li_assessors = XnatUtils.filter_list_dicts_regex(
li_assessors, 'procstatus',
['COMPLETE'])
li_assessors = filter(lambda x: 'WHOLEBRAIN' not in x['resources'],
li_assessors)
li_assessors = sorted(li_assessors, key=lambda k: k['session_label'])
start = False
for assessor in li_assessors:
if ARGS.session:
if assessor['session_label'] == ARGS.session:
start = True
else:示例3: print
# 需要导入模块: from dax import XnatUtils [as 别名]
# 或者: from dax.XnatUtils import list_project_assessors [as 别名]
import pandas
import pyxnat
import argparse
import time
from dax import XnatUtils
from dax import utilities
# Specify and parse command line arguments
parser = argparse.ArgumentParser()
parser.add_argument('project',help='Project name')
args = parser.parse_args()
print('Project: {}'.format(args.project))
xnat = XnatUtils.get_interface()
Assrs = XnatUtils.list_project_assessors(xnat, args.project)
xnat.disconnect()
timestamp = time.strftime("%Y%m%d%H%M%S")
outfile1 = 'status_by_assessor_{}_{}.csv'.format(args.project,timestamp)
outfile2 = 'status_by_session_{}_{}.csv'.format(args.project,timestamp)
R = list()
for assr in Assrs :
#print(assr['assessor_label'])
# Get desired fields
thisR = {}
for key in ('project_label','subject_label','session_label','proctype',
'assessor_id','procstatus','qcstatus','assessor_label') :示例4: len
# 需要导入模块: from dax import XnatUtils [as 别名]
# 或者: from dax.XnatUtils import list_project_assessors [as 别名]
__author__ = 'damons'
__purpose__ = 'set the assessor quality on xnat'
from dax import XnatUtils
import sys
XNAT_STATUS_LIST = ['Passed', 'Good', 'OK', 'Poor', 'Rerun', 'Needs QA', 'Needs Edits', 'Bad', 'Failed']
if __name__ == '__main__':
XNAT = XnatUtils.get_interface()
ASSESSORS = XnatUtils.list_project_assessors(XNAT, 'WOODWARD_TCP')
if len(sys.argv) != 4:
print len(sys.argv)
sys.stderr.write('ERROR: args must be <ASSESSOR_LABEL> <STATUS> <COMMENTS>')
sys.exit()
MY_ASSESSOR = sys.argv[1]
STATUS = sys.argv[2]
COMMENTS = sys.argv[3]
if STATUS not in XNAT_STATUS_LIST:
sys.stderr.write('ERROR: Status "%s" not in known list: %s\n'
%(STATUS, ','.join(XNAT_STATUS_LIST)))
for ASSESSOR in ASSESSORS:
if ASSESSOR['label'] == MY_ASSESSOR:
print "Setting QC of assessor %s to %s" % (MY_ASSESSOR,
STATUS)
OBJECT = XnatUtils.get_full_object(XNAT, ASSESSOR)
if not MY_ASSESSOR.endswith('-x-FS'):
OBJECT.attrs.set('proc:genProcData/validation/status', STATUS)
OBJECT.attrs.set('proc:genProcData/validation/notes', COMMENTS)
else: