本文整理汇总了Python中CGAT.SVGdraw.rect方法的典型用法代码示例。如果您正苦于以下问题：Python SVGdraw.rect方法的具体用法？Python SVGdraw.rect怎么用？Python SVGdraw.rect使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类CGAT.SVGdraw的用法示例。
在下文中一共展示了SVGdraw.rect方法的8个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: addValue
# 需要导入模块: from CGAT import SVGdraw [as 别名]
# 或者: from CGAT.SVGdraw import rect [as 别名]
def addValue(self, row, col, size, colour_value):
"""add a dot in row/col.
"""
# decide the size of the box
pos = bisect.bisect(self.mThresholdsSize, size)
if self.mRevertSize:
size = self.mMaxBoxSize * \
(1.0 - float(pos) / len(self.mThresholdsSize))
else:
size = self.mMaxBoxSize * float(pos) / len(self.mThresholdsSize)
d = (self.mMaxBoxSize - size) / 2
x = self.mMapCol2Position[col] + d
try:
y = self.mMapRow2Position[row] + d
except KeyError:
return
# determine the colour of the box
pos = bisect.bisect(self.mThresholdsColour, colour_value)
colour = self.mColours[pos]
e = SVGdraw.rect(x, y,
size, size,
stroke="black",
fill="rgb(%i,%i,%i)" % colour)
self.mElements.append(e)示例2: writeFooter
# 需要导入模块: from CGAT import SVGdraw [as 别名]
# 或者: from CGAT.SVGdraw import rect [as 别名]
def writeFooter(self):
"""write footer.
The footer contains the legend.
"""
current_x = self.mFooterFrom
current_y = self.mHeaderHeight + self.mDataHeight + 2 * self.mSeparator
self.mFooterBoxSize = 30
self.mNumTicks = 20
for x in range(len(self.mColourThresholds)):
e = SVGdraw.rect(current_x,
current_y,
self.mFooterBoxSize,
self.mFooterBoxSize,
fill="rgb(%i,%i,%i)" % self.mColours[x],
stroke="rgb(%i,%i,%i)" % self.mColours[x])
self.addElement(e)
if x % self.mNumTicks == 0:
e = SVGdraw.line(current_x,
current_y,
current_x,
current_y + self.mFooterBoxSize,
stroke="rgb(%i,%i,%i)" % BLACK,
stroke_width=5)
self.addElement(e)
e = SVGdraw.text(current_x,
current_y - self.mFooterBoxSize,
self.mFormatNumberLegend % self.mColourThresholds[
x],
self.mFooterFontSize,
self.mFooterFont,
stroke="rgb(%i,%i,%i)" % BLACK,
text_anchor="start")
self.addElement(e)
current_x += self.mFooterBoxSize
###########################################################
if self.mFooter:
current_y += max(self.mFooterFontSize,
self.mMaxBoxSize) + self.mSeparator
e = SVGdraw.text(self.mPageWidth / 2,
current_y + self.mFooterFontSize,
self.mFooter,
self.mFooterFontSize,
self.mFooterFont,
stroke="rgb(%i,%i,%i)" % BLACK,
text_anchor="middle")
self.addElement(e)示例3: writeScale
# 需要导入模块: from CGAT import SVGdraw [as 别名]
# 或者: from CGAT.SVGdraw import rect [as 别名]
def writeScale(self):
"""write scales."""
current_x = self.mScaleX
current_y = self.mScaleY + self.mScaleHeight
nboxes = len(self.mColourThresholds)
# box size for legend in x-direction
# subtract size of right-most axis label so that it takes the
# same width as self.mDataWidth.
box_size_x = math.ceil((self.mDataWidth -
(self.mScaleFontSize * len(
self.mFormatNumberLegend %
self.mColourThresholds[-1]))) / nboxes)
# change font size such that it labels will fit between tick-marks
self.mScaleFontSize = min(self.mScaleFontSize,
(box_size_x * self.mScaleNumTicks * 1.5) /
len(self.mFormatNumberLegend %
self.mColourThresholds[-1]))
for x in range(nboxes):
e = SVGdraw.rect(current_x,
current_y,
box_size_x,
self.mScaleBoxSizeY,
fill="rgb(%i,%i,%i)" % self.mColours[x],
stroke="rgb(%i,%i,%i)" % self.mColours[x])
self.addElement(e)
if x % self.mScaleNumTicks == 0:
e = SVGdraw.line(current_x,
current_y,
current_x,
current_y + self.mScaleBoxSizeY,
stroke="rgb(%i,%i,%i)" % BLACK,
stroke_width=5)
self.addElement(e)
e = SVGdraw.text(current_x,
current_y - self.mScaleBoxSizeY,
self.mFormatNumberLegend % self.mColourThresholds[
x],
self.mScaleFontSize,
self.mScaleFont,
stroke="rgb(%i,%i,%i)" % BLACK,
text_anchor="start")
self.addElement(e)
current_x += box_size_x示例4: getElements
# 需要导入模块: from CGAT import SVGdraw [as 别名]
# 或者: from CGAT.SVGdraw import rect [as 别名]
def getElements(self, node_id, x, y):
e = []
colour = self.getColour(node_id, x, y)
if self.mPlotSymbol == "circle":
e.append(SVGdraw.circle(x + self.mFontSize / 2,
y,
self.mFontSize / 2,
stroke="rgb(%i,%i,%i)" % BLACK,
fill="rgb(%i,%i,%i)" % colour))
elif self.mPlotSymbol == "square":
e.append(SVGdraw.rect(x, y - self.mFontSize / 2,
self.mFontSize,
self.mFontSize,
stroke="rgb(%i,%i,%i)" % BLACK,
fill="rgb(%i,%i,%i)" % colour))
return e示例5: addDuplication
# 需要导入模块: from CGAT import SVGdraw [as 别名]
# 或者: from CGAT.SVGdraw import rect [as 别名]
#.........这里部分代码省略.........
self.mRadius = self.mRadiusFallBack
self.mLastMax = max(self.mLastMax, ma)
else:
if self.mLastMax > mi:
self.mRadius += self.mRadiusIncrement
if with_separator:
self.addSeparator()
self.mPreviousMin = mi
self.mPreviousMax = ma
self.mPreviousCis = cis
self.mRadiusMax = max(self.mRadius, self.mRadiusMax)
########################################################
########################################################
########################################################
# draw points
########################################################
link_colour = master_colour
link_rad_width = self.mLinkRadStrokeWidth
link_arc_width = self.mLinkArcStrokeWidth
new_points = {}
for pos1, pos2, gene, quality, chr in points:
angle = self.getAngle((pos1 + pos2) / 2)
x, y = self.getPosOnArc(angle, self.mRadius)
try:
symbol = quality2symbol[quality]
except KeyError:
symbol = "rect"
if quality in quality2mask:
colour = self.mLinkColourSymbolMasked
link_colour = self.mLinkColourMasked
link_rad_width = self.mLinkStrokeWidthMasked
link_arc_width = self.mLinkStrokeWidthMasked
else:
colour = master_colour
if gene in self.mPreviousPoints:
continue
new_points[gene] = (x, y, angle, quality, chr)
if symbol == "circle":
ee = SVGdraw.circle(x, y, self.mLinkSymbolSize,
fill="rgb(%i,%i,%i)" % colour,
stroke="black",
stroke_width=self.mLinkStrokeWidthSymbol)
elif symbol == "rect":
ee = SVGdraw.rect(x - self.mLinkSymbolSize / 2, y - self.mLinkSymbolSize / 2,
self.mLinkSymbolSize, self.mLinkSymbolSize,
fill="rgb(%i,%i,%i)" % colour,
stroke="black",
stroke_width=self.mLinkStrokeWidthSymbol)
if url:
e = SVGdraw.link(url % gene)
e.addElement(ee)
else:
e = ee
示例6: plotGene
# 需要导入模块: from CGAT import SVGdraw [as 别名]
# 或者: from CGAT.SVGdraw import rect [as 别名]
def plotGene(self, x, y, gene=None, group_id=None):
"""plot a gene at x,y."""
if gene:
group_id = gene.mOrthologId
colour, format = self.mMapGroup2Colour[group_id]
filled, shape = format.split("-")
if filled == "filled":
fill = "rgb(%i,%i,%i)" % colour
stroke = "rgb(%i,%i,%i)" % BLACK
stroke_width = 1
elif filled == "open":
fill = "rgb(%i,%i,%i)" % WHITE
stroke = "rgb(%i,%i,%i)" % colour
stroke_width = self.mBlockSize / 2
if shape == "circle":
ee = SVGdraw.circle(x, y, self.mBlockSize, fill=fill, stroke=stroke, stroke_width=stroke_width)
elif shape == "box":
ee = SVGdraw.rect(
x - self.mBlockSize,
y - self.mBlockSize,
2 * self.mBlockSize,
2 * self.mBlockSize,
fill=fill,
stroke=stroke,
stroke_width=stroke_width,
)
elif shape == "lefttriangle":
ee = SVGdraw.polygon(
(
(x - self.mBlockSize, y),
(x + self.mBlockSize, y - self.mBlockSize),
(x + self.mBlockSize, y + self.mBlockSize),
),
fill=fill,
stroke=stroke,
stroke_width=stroke_width,
)
elif shape == "righttriangle":
ee = SVGdraw.polygon(
(
(x - self.mBlockSize, y - self.mBlockSize),
(x + self.mBlockSize, y),
(x - self.mBlockSize, y + self.mBlockSize),
),
fill=fill,
stroke=stroke,
stroke_width=stroke_width,
)
elif shape == "uptriangle":
ee = SVGdraw.polygon(
(
(x, y - self.mBlockSize),
(x + self.mBlockSize, y + self.mBlockSize),
(x - self.mBlockSize, y + self.mBlockSize),
),
fill="rgb(%i,%i,%i)" % WHITE,
stroke="rgb(%i,%i,%i)" % colour,
stroke_width=self.mBlockSize / 2,
)
elif shape == "downtriangle":
ee = SVGdraw.polygon(
(
(x, y + self.mBlockSize),
(x + self.mBlockSize, y - self.mBlockSize),
(x - self.mBlockSize, y - self.mBlockSize),
),
fill="rgb(%i,%i,%i)" % WHITE,
stroke="rgb(%i,%i,%i)" % colour,
stroke_width=self.mBlockSize / 2,
)
return ee示例7: writeFooter
# 需要导入模块: from CGAT import SVGdraw [as 别名]
# 或者: from CGAT.SVGdraw import rect [as 别名]
def writeFooter(self):
"""write footer.
The footer contains the legend.
"""
current_x = self.mFooterFrom
current_y = self.mHeaderHeight + self.mDataHeight + 2 * self.mSeparator
###########################################################
# Draw legend 1: size of boxes
e = SVGdraw.text(current_x,
current_y + self.mFooterFontSize,
self.mThresholdsSizeTitle,
self.mFooterFontSize,
self.mFooterFont,
stroke="rgb(%i,%i,%i)" % BLACK,
text_anchor="start")
current_x += len(self.mThresholdsSizeTitle) * \
self.mFooterFontSize / 1.5 + self.mSeparator
self.mElements.append(e)
l = len(self.mThresholdsSize)
for x in range(l):
if self.mRevertSize:
p = int(self.mMaxBoxSize * (1.0 - float(x) / l))
else:
p = int(self.mMaxBoxSize * (float(x) / l))
e = SVGdraw.rect(current_x,
current_y + (self.mMaxBoxSize - p) / 2,
p, p,
stroke="black",
fill="rgb(%i,%i,%i)" % self.startColour)
self.mElements.append(e)
current_x += self.mMaxBoxSize + self.mSeparator
t = "< %g" % (self.mThresholdsSize[x])
e = SVGdraw.text(current_x,
current_y + self.mFooterFontSize,
t,
self.mFooterFontSize,
self.mFooterFont,
stroke="rgb(%i,%i,%i)" % BLACK,
text_anchor="start")
current_x += len(t) * self.mFooterFontSize / 1.5 + self.mSeparator
self.mElements.append(e)
###########################################################
# Draw legend 2: colour of boxes
current_x = self.mFooterFrom
current_y += max(self.mFooterFontSize, self.mMaxBoxSize) + \
self.mSeparator
e = SVGdraw.text(current_x,
current_y + self.mFooterFontSize,
self.mThresholdsColourTitle,
self.mFooterFontSize,
self.mFooterFont,
stroke="rgb(%i,%i,%i)" % BLACK,
text_anchor="start")
current_x += len(self.mThresholdsColourTitle) * \
self.mFooterFontSize / 1.5 + self.mSeparator
self.mElements.append(e)
l = len(self.mThresholdsColour)
for x in range(l + 1):
p = self.mMaxBoxSize
if x < l:
t = "< %g" % (self.mThresholdsColour[x])
else:
t = "> %g" % (self.mThresholdsColour[x - 1])
e = SVGdraw.rect(current_x,
current_y,
p, p,
stroke="black",
fill="rgb(%i,%i,%i)" % self.mColours[x])
self.mElements.append(e)
current_x += self.mMaxBoxSize + self.mSeparator
e = SVGdraw.text(current_x,
current_y + self.mFooterFontSize,
t,
self.mFooterFontSize,
self.mFooterFont,
stroke="rgb(%i,%i,%i)" % BLACK,
text_anchor="start")
current_x += len(t) * self.mFooterFontSize / 1.5 + self.mSeparator
self.mElements.append(e)
#.........这里部分代码省略.........
示例8: addDuplication
# 需要导入模块: from CGAT import SVGdraw [as 别名]
# 或者: from CGAT.SVGdraw import rect [as 别名]
#.........这里部分代码省略.........
# get points of center
old_x1, old_y1 = self.getPosOnArcForRadius( (self.mPreviousMax + self.mPreviousMin) / 2, r1 )
new_x1, new_y1 = self.getPosOnArcForRadius( (ma + mi) / 2, r2 )
# lines for interleaved spans: skip
if not ((self.mPreviousMin < mi and self.mPreviousMax > ma) or \
(self.mPreviousMin > mi and self.mPreviousMax < ma)) :
## d = SVGdraw.pathdata( old_x2, old_y2 )
## d.line( new_x2, new_y2 )
## d.move( new_x1, new_y1 )
## d.line( old_x1, old_y1 )
## d.move( old_x2, old_y2 )
## e = SVGdraw.path( d,
## fill = "none",
## stroke = "rgb(%i,%i,%i)" % BLACK,
## stroke_width = self.mMarkerWidth / 2 )
e = SVGdraw.line( old_x1, old_y1,
new_x1, new_y1,
fill = "none",
stroke = "rgb(%i,%i,%i)" % GREY,
stroke_width = self.mMarkerWidth / 2 )
else:
# lines for covering spans, as these overlaps
e = None
## e = SVGdraw.line( old_x1, old_y1,
## new_x1, new_y1,
## fill = "none",
## stroke = "rgb(%i,%i,%i)" % GREY,
## stroke_width = self.mMarkerWidth / 2 )
if e:
self.addElement( e, self.mPlaneJoins )
self.mPreviousMin = mi
self.mPreviousMax = ma
self.mPreviousCis = cis
self.mRadiusMax = max(self.mRadius, self.mRadiusMax)
## draw points
link_colour = master_colour
link_width = 10
for pos1, pos2, gene, quality in points:
angle = self.getAngle( (pos1 + pos2) / 2 )
x,y = self.getPosOnArc( angle, self.mRadius )
try:
symbol = quality2symbol[quality]
except KeyError:
symbol = "rect"
if quality in quality2mask:
colour = GREY
link_colour = GREY
link_width = 1
else:
colour = master_colour
if symbol == "circle":
ee = SVGdraw.circle( x, y, self.mMarkerWidth,
fill = "rgb(%i,%i,%i)" % colour,
stroke="black",
stroke_width= 1)
elif symbol == "rect":
ee = SVGdraw.rect( x-self.mMarkerWidth/2, y-self.mMarkerWidth/2,
self.mMarkerWidth, self.mMarkerWidth,
fill = "rgb(%i,%i,%i)" % colour,
stroke="black",
stroke_width= 1)
if url:
e = SVGdraw.link( url % gene )
e.addElement( ee )
else:
e = ee
self.addElement( e )
angle1 = self.getAngle( mi )
angle2 = self.getAngle( ma )
x1,y1 = self.getPosOnArc( angle1, self.mRadius )
x2,y2 = self.getPosOnArc( angle2, self.mRadius )
d = SVGdraw.pathdata( x1, y1 )
if cis:
d.ellarc( self.mRadius, self.mRadius, 0, 0, 1, x2, y2 )
else:
d.ellarc( self.mRadius * 2, self.mRadius * 2, 0, 0, 0, x2, y2 )
e = SVGdraw.path( d,
fill = "none",
stroke = "rgb(%i,%i,%i)" % link_colour,
stroke_width = link_width )
self.addElement(e)