本文整理汇总了Java中org.sbml.jsbml.Model.getEventCount方法的典型用法代码示例。如果您正苦于以下问题：Java Model.getEventCount方法的具体用法？Java Model.getEventCount怎么用？Java Model.getEventCount使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类org.sbml.jsbml.Model的用法示例。
在下文中一共展示了Model.getEventCount方法的3个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Java代码示例。
示例1: parseEventSBOL
import org.sbml.jsbml.Model; //导入方法依赖的package包/类
private void parseEventSBOL(Model sbmlModel, HashMap<String, AssemblyNode2> idToNode) {
for (int i = 0; i < sbmlModel.getEventCount(); i++) {
Event sbmlEvent = sbmlModel.getListOfEvents().get(i);
AssemblyNode2 eventNode = constructNode(sbmlEvent, sbmlEvent.getId());
if (eventNode.getURIs().size() > 0)
containsSBOL = true;
idToNode.put(sbmlEvent.getId(), eventNode);
if (sbmlEvent.getTrigger() != null)
parseMath(sbmlEvent.getTrigger(), eventNode, idToNode);
if (sbmlEvent.getDelay() != null)
parseMath(sbmlEvent.getDelay(), eventNode, idToNode);
if (sbmlEvent.getPriority() != null)
parseMath(sbmlEvent.getPriority(), eventNode, idToNode);
for (int j = 0; j < sbmlEvent.getEventAssignmentCount(); j++) {
parseMath(sbmlEvent.getEventAssignment(j), eventNode, idToNode);
String output = sbmlEvent.getEventAssignment(j).getVariable();
if (output != null && idToNode.containsKey(output)) {
AssemblyNode2 outputNode = idToNode.get(output);
constructEdge(eventNode, outputNode);
}
}
if (sbmlEvent.getExtensionPackages().containsKey(CompConstants.namespaceURI))
parsePortMappings(sbmlEvent, eventNode, idToNode);
}
}
示例2: keepVarAssignRule
import org.sbml.jsbml.Model; //导入方法依赖的package包/类
/**
* Determines if a variable is already in an initial assignment, assignment
* rule, or rate rule
*/
public static boolean keepVarAssignRule(BioModel bioModel, String selected, String id) {
if (!selected.equals(id)) {
Model model = bioModel.getSBMLDocument().getModel();
for (int i = 0; i < model.getInitialAssignmentCount(); i++) {
InitialAssignment init = model.getInitialAssignment(i);
if (init.getVariable().equals(id))
return false;
}
for (int i = 0; i < model.getEventCount(); i++) {
Event event = model.getEvent(i);
for (int j = 0; j < event.getEventAssignmentCount(); j++) {
if (id.equals(event.getListOfEventAssignments().get(j).getVariable())) {
return false;
}
}
}
for (int i = 0; i < model.getRuleCount(); i++) {
Rule rule = model.getRule(i);
if (rule.isAssignment() && SBMLutilities.getVariable(rule).equals(id))
return false;
if (rule.isRate() && SBMLutilities.getVariable(rule).equals(id))
return false;
}
}
return true;
}
示例3: expandFunctionDefinitions
import org.sbml.jsbml.Model; //导入方法依赖的package包/类
public static void expandFunctionDefinitions(SBMLDocument doc)
{
Model model = doc.getModel();
for (int i = 0; i < model.getInitialAssignmentCount(); i++)
{
InitialAssignment ia = model.getListOfInitialAssignments().get(i);
if (ia.isSetMath())
{
ia.setMath(inlineFormula(model, ia.getMath()));
}
}
for (int i = 0; i < model.getRuleCount(); i++)
{
Rule r = model.getRule(i);
if (r.isSetMath())
{
r.setMath(inlineFormula(model, r.getMath()));
}
}
for (int i = 0; i < model.getConstraintCount(); i++)
{
Constraint c = model.getConstraint(i);
if (c.isSetMath())
{
c.setMath(inlineFormula(model, c.getMath()));
}
}
for (int i = 0; i < model.getEventCount(); i++)
{
Event e = model.getEvent(i);
if (e.getDelay() != null && e.getDelay().isSetMath())
{
e.getDelay().setMath(inlineFormula(model, e.getDelay().getMath()));
}
if (e.getTrigger() != null && e.getTrigger().isSetMath())
{
e.getTrigger().setMath(inlineFormula(model, e.getTrigger().getMath()));
}
if (e.getPriority() != null && e.getPriority().isSetMath())
{
e.getPriority().setMath(inlineFormula(model, e.getPriority().getMath()));
}
for (int j = 0; j < e.getEventAssignmentCount(); j++)
{
EventAssignment ea = e.getListOfEventAssignments().get(j);
if (ea.isSetMath())
{
ea.setMath(inlineFormula(model, ea.getMath()));
}
}
}
}