Java Experiment.getTitle方法代码示例

import gov.nih.nci.caarray.domain.project.Experiment; //导入方法依赖的package包/类
private static void writeSeriesSection(Experiment experiment, String permaLinkUrl, PrintWriter out) {
    out.print("^SERIES=");
    out.println(experiment.getPublicIdentifier());
    out.print("!Series_title=");
    out.println(experiment.getTitle());
    out.print("!Series_summary=");
    final String desc =
            StringUtils.isNotBlank(experiment.getDescription()) ? experiment.getDescription() : experiment
                    .getTitle();
    out.println(desc);
    writeExperimentDesignTypes(experiment, desc, out);
    for (final Publication pub : experiment.getPublications()) {
        out.print("!Series_pubmed_id=");
        out.println(pub.getPubMedId());
    }
    for (final ExperimentContact c : experiment.getExperimentContacts()) {
        writeExperimentContact(c, out);
    }
    out.print("!Series_web_link=");
    out.println(permaLinkUrl);
    for (final Hybridization h : experiment.getHybridizations()) {
        out.print("!Series_sample_id=");
        out.println(h.getName());
    }
}
 

import gov.nih.nci.caarray.domain.project.Experiment; //导入方法依赖的package包/类
private boolean isResultOkay(List experimentList) {
    if (experimentList.isEmpty()) {
        return true;
    }

    Iterator i = experimentList.iterator();
    while (i.hasNext()) {
        Experiment retrievedExperiment = (Experiment) i.next();
        // Check if retrieved experiment matches requested search criteria.
        if ((!manufacturer.equals(retrievedExperiment.getManufacturer().getName()))
                || (!organism.equals(retrievedExperiment.getOrganism().getCommonName()))) {
            return false;
        }
        // Check if retrieved experiment has mandatory fields.
        if ((retrievedExperiment.getTitle() == null) 
                || (retrievedExperiment.getAssayTypes() == null && retrievedExperiment.getManufacturer() == null)) {
            return false;
        }
    }
    return true;
}
 

import gov.nih.nci.caarray.domain.project.Experiment; //导入方法依赖的package包/类
private boolean isResultOkay(List<Experiment> experimentList) {
    if (experimentList.isEmpty()) {
        return true;
    }

    Iterator<Experiment> i = experimentList.iterator();
    while (i.hasNext()) {
        Experiment retrievedExperiment = i.next();
        // Check if retrieved experiment matches requested search criteria.
        if ((!manufacturer.equals(retrievedExperiment.getManufacturer().getName()))
                || (!organism.equals(retrievedExperiment.getOrganism().getCommonName()))) {
            return false;
        }
        // Check if retrieved experiment has mandatory fields.
        if ((retrievedExperiment.getTitle() == null)
                || (retrievedExperiment.getAssayTypes() == null && retrievedExperiment.getManufacturer() == null)) {
            return false;
        }
    }
    return true;
}
 

import gov.nih.nci.caarray.domain.project.Experiment; //导入方法依赖的package包/类
private boolean isResultOkay(List experimentList, String manufacturerName, String organismName) {
    if (experimentList.isEmpty()) {
        return false;
    }

    Iterator i = experimentList.iterator();
    while (i.hasNext()) {
        Experiment retrievedExperiment = (Experiment) i.next();
        // Check if retrieved experiment matches requested search criteria.
        logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getManufacturer().getName(): "
                + retrievedExperiment.getManufacturer().getName());
        logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getOrganism().getCommonName(): "
                + retrievedExperiment.getOrganism().getCommonName());
        if ((!manufacturerName.equals(retrievedExperiment.getManufacturer().getName()))
                || (!organismName.equals(retrievedExperiment.getOrganism().getCommonName()))) {
            return false;
        }
        // Check if retrieved experiment has mandatory fields.
        if (retrievedExperiment.getTitle() == null || retrievedExperiment.getAssayTypes() == null
                && retrievedExperiment.getManufacturer() == null) {
            return false;
        }
        logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getAssayTypes(): "
                + retrievedExperiment.getAssayTypes());
    }
    return true;
}
 

import gov.nih.nci.caarray.domain.project.Experiment; //导入方法依赖的package包/类
private boolean isResultOkay(List<Experiment> experimentList, String manufacturerName, String organismName) {
    if (experimentList.isEmpty()) {
        return false;
    }

    Iterator<Experiment> i = experimentList.iterator();
    while (i.hasNext()) {
        Experiment retrievedExperiment = i.next();
        // Check if retrieved experiment matches requested search criteria.
        logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getManufacturer().getName(): "
                + retrievedExperiment.getManufacturer().getName());
        logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getOrganism().getCommonName(): "
                + retrievedExperiment.getOrganism().getCommonName());
        if ((!manufacturerName.equals(retrievedExperiment.getManufacturer().getName()))
                || (!organismName.equals(retrievedExperiment.getOrganism().getCommonName()))) {
            return false;
        }
        // Check if retrieved experiment has mandatory fields.
        if (retrievedExperiment.getTitle() == null || retrievedExperiment.getAssayTypes() == null
                && retrievedExperiment.getManufacturer() == null) {
            return false;
        }
        logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getAssayTypes(): "
                + retrievedExperiment.getAssayTypes());
    }
    return true;
}
 

import gov.nih.nci.caarray.domain.project.Experiment; //导入方法依赖的package包/类
private boolean isResultOkay(CQLQueryResults cqlResults, String manufacturerName, String organismName) {
    if (cqlResults.getObjectResult() == null) {
        return false;
    }
    Iterator iter = new CQLQueryResultsIterator(cqlResults, CaArraySvcClient.class
            .getResourceAsStream("client-config.wsdd"));
    if (!(iter.hasNext())) {
        return false;
    }
    while (iter.hasNext()) {
        Experiment retrievedExperiment = (Experiment) (iter.next());
        // The following code commented out because of upcoming defect re: manufacturer attribute being null.
        // Check if retrieved experiment matches requested search criteria.
        //logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getManufacturer().getName(): "
        //+ retrievedExperiment.getManufacturer().getName());
        logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getOrganism().getCommonName(): "
                + retrievedExperiment.getOrganism().getCommonName());
        //if ((!manufacturerName.equals(retrievedExperiment.getManufacturer().getName()))
        //|| (!organismName.equals(retrievedExperiment.getOrganism().getCommonName()))) {
        //return false;
        //}
        // Check if retrieved experiment has mandatory fields.
        if ((retrievedExperiment.getTitle() == null)
                || (retrievedExperiment.getAssayTypes() == null && retrievedExperiment.getManufacturer() == null)) {
            return false;
        }
        logForSilverCompatibility(TRAVERSE_OBJECT_GRAPH, "Experiment.getAssayTypes(): "
                + retrievedExperiment.getAssayTypes());
    }
    return true;
}