本文整理汇总了C#中libsbmlcs.SBMLDocument.checkInternalConsistency方法的典型用法代码示例。如果您正苦于以下问题：C# SBMLDocument.checkInternalConsistency方法的具体用法？C# SBMLDocument.checkInternalConsistency怎么用？C# SBMLDocument.checkInternalConsistency使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类libsbmlcs.SBMLDocument的用法示例。
在下文中一共展示了SBMLDocument.checkInternalConsistency方法的15个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的C#代码示例。
示例1: test_internal_consistency_check_20306
public void test_internal_consistency_check_20306()
{
SBMLDocument d = new SBMLDocument(3,1);
long errors;
Model m = d.createModel();
FunctionDefinition fd = m.createFunctionDefinition();
fd.setId("fd");
errors = d.checkInternalConsistency();
assertTrue( errors == 1 );
assertTrue( d.getError(0).getErrorId() == 20306 );
ASTNode ast = libsbml.parseFormula("lambda(x, 2*x)");
fd.setMath(ast);
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例2: test_internal_consistency_check_20419
public void test_internal_consistency_check_20419()
{
SBMLDocument d = new SBMLDocument(3,1);
long errors;
Model m = d.createModel();
UnitDefinition ud = m.createUnitDefinition();
errors = d.checkInternalConsistency();
assertTrue( errors == 1 );
assertTrue( d.getError(0).getErrorId() == 20419 );
ud.setId("ud");
d.getErrorLog().clearLog();
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例3: test_internal_consistency_check_20623
public void test_internal_consistency_check_20623()
{
SBMLDocument d = new SBMLDocument(3,1);
long errors;
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("c");
c.setConstant(true);
Species s = m.createSpecies();
errors = d.checkInternalConsistency();
assertTrue( errors == 5 );
assertTrue( d.getError(0).getErrorId() == 20623 );
assertTrue( d.getError(1).getErrorId() == 20614 );
assertTrue( d.getError(2).getErrorId() == 20623 );
assertTrue( d.getError(3).getErrorId() == 20623 );
assertTrue( d.getError(4).getErrorId() == 20623 );
s.setId("s");
d.getErrorLog().clearLog();
errors = d.checkInternalConsistency();
assertTrue( errors == 4 );
assertTrue( d.getError(0).getErrorId() == 20614 );
assertTrue( d.getError(1).getErrorId() == 20623 );
assertTrue( d.getError(2).getErrorId() == 20623 );
assertTrue( d.getError(3).getErrorId() == 20623 );
s.setCompartment("c");
d.getErrorLog().clearLog();
errors = d.checkInternalConsistency();
assertTrue( errors == 3 );
assertTrue( d.getError(0).getErrorId() == 20623 );
assertTrue( d.getError(1).getErrorId() == 20623 );
assertTrue( d.getError(2).getErrorId() == 20623 );
s.setHasOnlySubstanceUnits(true);
d.getErrorLog().clearLog();
errors = d.checkInternalConsistency();
assertTrue( errors == 2 );
assertTrue( d.getError(0).getErrorId() == 20623 );
assertTrue( d.getError(1).getErrorId() == 20623 );
s.setBoundaryCondition(true);
d.getErrorLog().clearLog();
errors = d.checkInternalConsistency();
assertTrue( errors == 1 );
assertTrue( d.getError(0).getErrorId() == 20623 );
s.setConstant(true);
d.getErrorLog().clearLog();
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例4: test_ReadSBML_FunctionDefinition_OnlyBVars
public void test_ReadSBML_FunctionDefinition_OnlyBVars()
{
FunctionDefinition fd;
SBMLError error;
int numErrors;
ASTNode math;
string formula;
string s = wrapSBML_L2v1("<listOfFunctionDefinitions>" +
" <functionDefinition id='invalid'>" +
" <math xmlns='http://www.w3.org/1998/Math/MathML'>" +
" <lambda>" +
" <bvar><ci> x </ci></bvar>" +
" <bvar><ci> y </ci></bvar>" +
" <bvar><ci> z </ci></bvar>" +
" </lambda>" +
" </math>" +
" </functionDefinition>" +
"</listOfFunctionDefinitions>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
D.checkInternalConsistency();
D.checkConsistency();
numErrors = (int)D.getNumErrors();
assertTrue( numErrors == 1 );
error = D.getError(0);
int errorId = (int)error.getErrorId();
assertTrue( errorId == libsbml.NoBodyInFunctionDef );
assertTrue( M.getNumFunctionDefinitions() == 1 );
fd = M.getFunctionDefinition(0);
assertTrue( fd != null );
assertEquals( true, fd.isSetId() );
assertEquals( false, fd.isSetName() );
assertTrue(( "invalid" == fd.getId() ));
assertTrue( fd.getBody() == null );
assertEquals( true, fd.isSetMath() );
math = fd.getMath();
formula = libsbml.formulaToString(math);
assertTrue( formula != null );
assertTrue(( "lambda(x, y, z)" == formula ));
}示例5: test_internal_consistency_check_99904_rule_rate
public void test_internal_consistency_check_99904_rule_rate()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
Rule r = new RateRule(2,4);
d.setLevelAndVersion(1,2,false);
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("cc");
c.setConstant(false);
r.setVariable("cc");
r.setFormula("2");
r.setMetaId("mmm");
m.addRule(r);
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例6: test_internal_consistency_check_99904_react
public void test_internal_consistency_check_99904_react()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
Reaction r = new Reaction(2,4);
d.setLevelAndVersion(1,2,false);
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("cc");
r.setId("r");
r.setMetaId("mmm");
m.addReaction(r);
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例7: test_internal_consistency_check_99904_model
public void test_internal_consistency_check_99904_model()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
d.setLevelAndVersion(1,2,false);
Model m = new Model(2,4);
Compartment c = m.createCompartment();
c.setId("cc");
m.setMetaId("mmm");
d.setModel(m);
errors = d.checkInternalConsistency();
assertTrue( errors == 1 );
assertTrue( d.getError(0).getErrorId() == 20201 );
d = null;
}示例8: test_internal_consistency_check_99903_param
public void test_internal_consistency_check_99903_param()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
Parameter p = new Parameter(2,4);
d.setLevelAndVersion(1,2,false);
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("cc");
p.setConstant(true);
p.setId("c");
m.addParameter(p);
Rule r = m.createAssignmentRule();
r.setVariable("c");
r.setFormula("2*3");
errors = d.checkInternalConsistency();
assertTrue( errors == 2 );
d = null;
}示例9: test_internal_consistency_check_99925
public void test_internal_consistency_check_99925()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
Unit u = new Unit(2,4);
d.setLevelAndVersion(1,2,false);
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("cc");
UnitDefinition ud = m.createUnitDefinition();
ud.setId("ud");
u.setKind(libsbml.UNIT_KIND_MOLE);
u.setOffset(9);
ud.addUnit(u);
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例10: test_internal_consistency_check_99923
public void test_internal_consistency_check_99923()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
StoichiometryMath sm = new StoichiometryMath(2,4);
Model m = d.createModel();
d.setLevelAndVersion(1,2,false);
Species s = m.createSpecies();
s.setId("s");
Compartment c = m.createCompartment();
c.setId("c");
s.setCompartment("c");
Reaction r = m.createReaction();
r.setId("r");
SpeciesReference sr = r.createProduct();
sr.setSpecies("s");
sr.setStoichiometryMath(sm);
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例11: test_internal_consistency_check_99922
public void test_internal_consistency_check_99922()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
SpeciesType ct = new SpeciesType(2,4);
Model m = d.createModel();
ct.setId("st");
d.setLevelAndVersion(2,1,false);
m.addSpeciesType(ct);
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例12: test_internal_consistency_check_99921
public void test_internal_consistency_check_99921()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
SpeciesReference sr = new SpeciesReference(2,4);
d.setLevelAndVersion(2,1,false);
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("c");
Species s = m.createSpecies();
s.setId("s");
Reaction r = m.createReaction();
r.setId("r");
s.setCompartment("c");
sr.setSpecies("s");
sr.setName("mmm");
r.addReactant(sr);
errors = d.checkInternalConsistency();
assertTrue( errors == 1 );
assertTrue( d.getError(0).getErrorId() == 21101 );
d = null;
}示例13: test_internal_consistency_check_99916_rule
public void test_internal_consistency_check_99916_rule()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
Species s = new Species(2,4);
d.setLevelAndVersion(1,2,false);
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("c");
s.setId("s");
s.setCompartment("c");
s.setConstant(true);
m.addSpecies(s);
Rule r = m.createAssignmentRule();
r.setVariable("s");
r.setFormula("2");
errors = d.checkInternalConsistency();
assertTrue( errors == 2 );
d = null;
}示例14: test_internal_consistency_check_99916_reaction
public void test_internal_consistency_check_99916_reaction()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
Species s = new Species(2,4);
d.setLevelAndVersion(1,2,false);
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("c");
Reaction r = m.createReaction();
r.setId("r");
SpeciesReference sr = r.createReactant();
s.setId("s");
s.setCompartment("c");
s.setConstant(true);
sr.setSpecies("s");
m.addSpecies(s);
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}示例15: test_internal_consistency_check_99915_rate
public void test_internal_consistency_check_99915_rate()
{
SBMLDocument d = new SBMLDocument(2,4);
long errors;
d.setLevelAndVersion(1,2,false);
Model m = d.createModel();
Compartment c = m.createCompartment();
c.setId("c");
c.setConstant(false);
RateRule r = m.createRateRule();
r.setL1TypeCode(libsbml.SBML_SPECIES_CONCENTRATION_RULE);
r.setFormula("2");
r.setVariable("c");
r.setUnits("mmm");
errors = d.checkInternalConsistency();
assertTrue( errors == 0 );
d = null;
}