本文整理汇总了C#中libsbmlcs.Model.createReaction方法的典型用法代码示例。如果您正苦于以下问题:C# Model.createReaction方法的具体用法?C# Model.createReaction怎么用?C# Model.createReaction使用的例子?那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类libsbmlcs.Model
的用法示例。
在下文中一共展示了Model.createReaction方法的15个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的C#代码示例。
示例1: test_SpeciesReference_Reactant_parent_create_model
public void test_SpeciesReference_Reactant_parent_create_model()
{
Model m = new Model(2,4);
Reaction r = m.createReaction();
SpeciesReference sr = m.createReactant();
ListOf lo = r.getListOfReactants();
assertTrue( lo == r.getReactant(0).getParentSBMLObject() );
assertTrue( lo == sr.getParentSBMLObject() );
assertTrue( r == lo.getParentSBMLObject() );
}
示例2: test_Reaction_parent_create
public void test_Reaction_parent_create()
{
Model m = new Model(2,4);
Reaction r = m.createReaction();
ListOf lo = m.getListOfReactions();
assertTrue( lo == m.getReaction(0).getParentSBMLObject() );
assertTrue( lo == r.getParentSBMLObject() );
assertTrue( m == lo.getParentSBMLObject() );
}
示例3: test_SpeciesReference_Modifier_parent_create_model
public void test_SpeciesReference_Modifier_parent_create_model()
{
Model m = new Model(2,4);
Reaction r = m.createReaction();
ModifierSpeciesReference sr = m.createModifier();
ListOf lo = r.getListOfModifiers();
assertTrue( lo == sr.getParentSBMLObject() );
assertTrue( lo == r.getModifier(0).getParentSBMLObject() );
assertTrue( r == lo.getParentSBMLObject() );
}
示例4: test_KineticLaw_Parameter_parent_create_model
public void test_KineticLaw_Parameter_parent_create_model()
{
Model m = new Model(2,4);
Reaction r = m.createReaction();
KineticLaw kl = m.createKineticLaw();
Parameter p = m.createKineticLawParameter();
assertTrue( kl.getNumParameters() == 1 );
ListOfParameters lop = kl.getListOfParameters();
assertTrue( r == kl.getParentSBMLObject() );
assertTrue( kl == lop.getParentSBMLObject() );
assertTrue( lop == p.getParentSBMLObject() );
assertTrue( lop == kl.getParameter(0).getParentSBMLObject() );
kl = null;
}
示例5: test_KineticLaw_parent_create_model
public void test_KineticLaw_parent_create_model()
{
Model m = new Model(2,4);
Reaction r = m.createReaction();
KineticLaw kl = r.createKineticLaw();
assertTrue( r == kl.getParentSBMLObject() );
assertTrue( r == r.getKineticLaw().getParentSBMLObject() );
r = null;
}
示例6: test_SBML_C_parseL3Formula_modelPresent4
public void test_SBML_C_parseL3Formula_modelPresent4()
{
Model model = new Model(3,1);
Reaction p = model.createReaction();
p.setId( "pi");;
ASTNode r = libsbml.parseL3FormulaWithModel("pi", model);
assertTrue( r.getType() == libsbml.AST_NAME );
assertTrue(( "pi" == r.getName() ));
assertTrue( r.getNumChildren() == 0 );
r = null;
}
示例7: test_SpeciesReference_Reactant_ancestor_create_model
public void test_SpeciesReference_Reactant_ancestor_create_model()
{
Model m = new Model(2,4);
Reaction r = m.createReaction();
SpeciesReference sr = m.createReactant();
ListOf lo = r.getListOfReactants();
assertTrue( sr.getAncestorOfType(libsbml.SBML_REACTION) == r );
assertTrue( sr.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( sr.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( sr.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( sr.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null );
SpeciesReference obj = r.getReactant(0);
assertTrue( obj.getAncestorOfType(libsbml.SBML_REACTION) == r );
assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null );
}
示例8: test_KineticLaw_ancestor_create_model
public void test_KineticLaw_ancestor_create_model()
{
Model m = new Model(2,4);
Reaction r = m.createReaction();
KineticLaw kl = r.createKineticLaw();
assertTrue( kl.getAncestorOfType(libsbml.SBML_REACTION) == r );
assertTrue( kl.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( kl.getAncestorOfType(libsbml.SBML_DELAY) == null );
assertTrue( kl.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
KineticLaw obj = r.getKineticLaw();
assertTrue( obj.getAncestorOfType(libsbml.SBML_REACTION) == r );
assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DELAY) == null );
r = null;
}
示例9: test_KineticLaw_Parameter_ancestor_create_model
public void test_KineticLaw_Parameter_ancestor_create_model()
{
Model m = new Model(2,4);
Reaction r = m.createReaction();
KineticLaw kl = m.createKineticLaw();
Parameter p = m.createKineticLawParameter();
assertTrue( kl.getNumParameters() == 1 );
ListOfParameters lop = kl.getListOfParameters();
assertTrue( p.getAncestorOfType(libsbml.SBML_KINETIC_LAW) == kl );
assertTrue( p.getAncestorOfType(libsbml.SBML_LIST_OF) == lop );
assertTrue( p.getAncestorOfType(libsbml.SBML_REACTION) == r );
assertTrue( p.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( p.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( p.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null );
Parameter obj = kl.getParameter(0);
assertTrue( obj.getAncestorOfType(libsbml.SBML_KINETIC_LAW) == kl );
assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lop );
assertTrue( obj.getAncestorOfType(libsbml.SBML_REACTION) == r );
assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null );
kl = null;
}
示例10: test_Model_createReactant
public void test_Model_createReactant()
{
Model m = new Model(2,2);
Reaction p = m.createReaction();
SpeciesReference sr = m.createReactant();
assertTrue( p.getNumReactants() == 1 );
assertTrue( (sr).getLevel() == 2 );
assertTrue( (sr).getVersion() == 2 );
m = null;
}
示例11: test_Model_createReaction
public void test_Model_createReaction()
{
Model m = new Model(2,2);
Reaction p = m.createReaction();
assertTrue( m.getNumReactions() == 1 );
assertTrue( (p).getLevel() == 2 );
assertTrue( (p).getVersion() == 2 );
m = null;
}
示例12: test_Model_createKineticLawParameters
public void test_Model_createKineticLawParameters()
{
Model m = new Model(2,2);
Reaction r = m.createReaction();
KineticLaw kl = m.createKineticLaw();
Parameter p = m.createKineticLawParameter();
assertTrue( r.isSetKineticLaw() == true );
assertTrue( kl.getNumParameters() == 1 );
assertTrue( (p).getLevel() == 2 );
assertTrue( (p).getVersion() == 2 );
m = null;
}
示例13: test_Model_createKineticLaw
public void test_Model_createKineticLaw()
{
Model m = new Model(2,2);
Reaction p = m.createReaction();
KineticLaw kl = m.createKineticLaw();
assertTrue( p.isSetKineticLaw() == true );
assertTrue( (kl).getLevel() == 2 );
assertTrue( (kl).getVersion() == 2 );
m = null;
}
示例14: test_SBML_C_parseL3Formula_modelPresent6
public void test_SBML_C_parseL3Formula_modelPresent6()
{
Model model = new Model(3,1);
Reaction p = model.createReaction();
SpeciesReference sr = p.createProduct();
sr.setId( "AVOGADRO");;
ASTNode r = libsbml.parseL3FormulaWithModel("avogadro", model);
assertTrue( r.getType() == libsbml.AST_NAME_AVOGADRO );
assertTrue(( "avogadro" == r.getName() ));
assertTrue( r.getNumChildren() == 0 );
r = null;
}
示例15: test_create_l1v1_units
public void test_create_l1v1_units()
{
SBMLDocument d;
Model m;
Compartment c;
KineticLaw kl;
Parameter p;
Reaction r;
Species s;
SpeciesReference sr;
Unit u;
UnitDefinition ud;
d = new SBMLDocument();
m = new Model(2,4);
d.setModel(m);
ud = m.createUnitDefinition();
ud.setName( "substance");
u = m.createUnit();
u.setKind(libsbml.UNIT_KIND_MOLE);
u.setScale(-3);
ud = m.createUnitDefinition();
ud.setName( "mls");
u = m.createUnit();
u.setKind(libsbml.UNIT_KIND_MOLE);
u.setScale(-3);
u = m.createUnit();
u.setKind(libsbml.UNIT_KIND_LITER);
u.setExponent(-1);
u = m.createUnit();
u.setKind(libsbml.UNIT_KIND_SECOND);
u.setExponent(-1);
c = m.createCompartment();
c.setName( "cell");
s = m.createSpecies();
s.setName( "x0");
s.setCompartment( "cell");
s.setInitialAmount(1);
s = m.createSpecies();
s.setName( "x1");
s.setCompartment( "cell");
s.setInitialAmount(1);
s = m.createSpecies();
s.setName( "s1");
s.setCompartment( "cell");
s.setInitialAmount(1);
s = m.createSpecies();
s.setName( "s2");
s.setCompartment( "cell");
s.setInitialAmount(1);
p = m.createParameter();
p.setName( "vm");
p.setUnits( "mls");
p.setValue(2);
p = m.createParameter();
p.setName( "km");
p.setValue(2);
r = m.createReaction();
r.setName( "v1");
sr = m.createReactant();
sr.setSpecies( "x0");
sr = m.createProduct();
sr.setSpecies( "s1");
kl = m.createKineticLaw();
kl.setFormula( "(vm * s1)/(km + s1)");
r = m.createReaction();
r.setName( "v2");
sr = m.createReactant();
sr.setSpecies( "s1");
sr = m.createProduct();
sr.setSpecies( "s2");
kl = m.createKineticLaw();
kl.setFormula( "(vm * s2)/(km + s2)");
r = m.createReaction();
r.setName( "v3");
sr = m.createReactant();
sr.setSpecies( "s2");
sr = m.createProduct();
sr.setSpecies( "x1");
kl = m.createKineticLaw();
kl.setFormula( "(vm * s1)/(km + s1)");
d = null;
}