本文整理汇总了C++中TrackList::getTrackReference方法的典型用法代码示例。如果您正苦于以下问题：C++ TrackList::getTrackReference方法的具体用法？C++ TrackList::getTrackReference怎么用？C++ TrackList::getTrackReference使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类TrackList的用法示例。
在下文中一共展示了TrackList::getTrackReference方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的C++代码示例。
示例1: init
//.........这里部分代码省略.........
snp.track = i;
snp.snp = charQry;
snpColumn.snps.push_back(snp);
}
}
posLast = position;
refLast = charRef;
}
//totalLength = (*tracks[0])[tracks[0]->size() - 1]->getStart() + (*tracks[0])[tracks[0]->size() - 1]->getLength() + gapsTotal;
QString refSeq;
for ( int i = 0; i < referenceList.getReferenceCount(); i++ )
{
refSeq.append(QString::fromStdString(referenceList.getReference(i).sequence));
}
int coreSize = 0;
for ( int i = 0; i < lcbs.size(); i++ )
{
const Region * regionRef = (*lcbs[i].regions)[0];
int startGapped = getPositionGapped(regionRef->getStart() - 1) + 1;
int endGapped = getPositionGapped(regionRef->getStart() + regionRef->getLength()) - 1;
lcbs[i].startGapped = startGapped;
lcbs[i].lengthGapped = endGapped - startGapped + 1;
coreSize += regionRef->getLength();
}
core = (float)coreSize / refSeq.length();
qSort(lcbs.begin(), lcbs.end(), lcbLessThan);
totalLength = refSeq.length() + gapsTotal;
refSeqCount = referenceList.getReferenceCount();
if ( refSeqStarts )
{
delete [] refSeqStarts;
}
refSeqStarts = new long long int[refSeqCount];
long long int total = 0;
for ( int i = 0; i < refSeqCount; i++ )
{
refSeqStarts[i] = getPositionGapped(total);
total += referenceList.getReference(i).sequence.length();
}
if ( refSeqGapped )
{
delete [] refSeqGapped;
}
refSeqGapped = new char[totalLength];
int gapId = 0;
gapsTotal = 0;
for ( int i = 0; i < totalLength; i++ )
{
if ( gaps.size() && i == gaps[gapId].start )
{
while( i <= gaps[gapId].end )
{
refSeqGapped[i] = '-';
i++;
}
gapsTotal = gaps[gapId].offset;
if ( gapId < gaps.size() - 1 )
{
gapId++;
}
}
if ( i - gapsTotal < refSeq.length() )
{
refSeqGapped[i] = refSeq.at(i - gapsTotal).toLatin1(); // TODO: gap at pos 0?
}
}
if ( trackList.getTrackReference() > 0 )
{
setTrackReference(trackList.getTrackReference());
}
setFilterScale();
return true;
}