C++ AliReconstruction::SetRunQA方法代码示例

void rec() {
	//  AliLog::SetGlobalDebugLevel(10);
	AliCDBManager * man = AliCDBManager::Instance();
	man->SetDefaultStorage("alien://Folder=/alice/simulation/2008/v4-10-Release/Residual/");
	man->SetSpecificStorage("EMCAL/*","local://DB");
	
	AliReconstruction reco;
	AliMagFMaps* field = new AliMagFMaps("Maps","Maps", 2, 1., 10., AliMagFMaps::k5kG);
	AliTracker::SetFieldMap(field,kTRUE);
	reco.SetUniformFieldTracking(kFALSE);
	reco.SetWriteESDfriend();
	reco.SetWriteAlignmentData();
  
	AliTPCRecoParam * tpcRecoParam = AliTPCRecoParam::GetLowFluxParam();
	AliTPCReconstructor::SetRecoParam(tpcRecoParam);
	AliTPCReconstructor::SetStreamLevel(0);
	reco.SetRunReconstruction("ITS TPC TRD TOF HMPID PHOS EMCAL MUON T0 VZERO FMD PMD ZDC");
	//reco.SetInput("raw.root") ;
	//AliPHOSRecoParam* recEmc = new AliPHOSRecoParamEmc();
//	recEmc->SetSubtractPedestals(kFALSE);
//	AliPHOSReconstructor::SetRecoParamEmc(recEmc);  
	reco.SetRunQA(kFALSE) ; 

	TStopwatch timer;
	timer.Start();
	reco.Run();
	timer.Stop();
	timer.Print();
}

void rec() {
  AliReconstruction reco;

  reco.SetWriteESDfriend();
  reco.SetWriteAlignmentData();

  reco.SetDefaultStorage("local://$ALICE_ROOT/OCDB");
  reco.SetSpecificStorage("GRP/GRP/Data",
			  Form("local://%s",gSystem->pwd()));
  reco.SetRunPlaneEff(kTRUE);

  reco.SetRunQA("ALL:ALL") ;
  
  reco.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;
  
  for (Int_t det = 0 ; det < AliQA::kNDET ; det++) {
    reco.SetQACycles(det, 999) ;
    reco.SetQAWriteExpert(det) ; 
  }
  
  TStopwatch timer;
  timer.Start();
  reco.Run();
  timer.Stop();
  timer.Print();
}

void runReconstruction(int seed, const char* input, const char* recoptions, bool rawocdb)
{ 
  AliCDBManager* man = AliCDBManager::Instance();
  
  if ( rawocdb ) 
  {
    cout << "**** WILL USE RAW OCDB" << endl;
    man->SetDefaultStorage("raw://"); //alien://folder=/alice/data/2011/OCDB?cacheFold=/Users/laurent/OCDBcache");
    man->SetSpecificStorage("ITS/Calib/RecoParam","alien://folder=/alice/cern.ch/user/p/ppillot/OCDB_PbPbSim");
  } 
  else
  {
    man->SetDefaultStorage("local://$ALICE_ROOT/OCDB");

    man->SetSpecificStorage("GRP/GRP/Data",
                            Form("local://%s",gSystem->pwd()));

  }
  
  gRandom->SetSeed(seed);
  
  AliReconstruction* MuonRec = new AliReconstruction("galice.root");
  MuonRec->SetInput(gSystem->ExpandPathName(input));
  MuonRec->SetRunReconstruction("MUON ITS");
  MuonRec->SetFillESD("HLT");
  MuonRec->SetOption("HLT", "libAliHLTMUON.so");
  MuonRec->SetNumberOfEventsPerFile(10000);
  MuonRec->SetOption("MUON",recoptions);
  MuonRec->SetRunQA("MUON:ALL");
  MuonRec->SetQAWriteExpert(AliQAv1::kMUON);
  MuonRec->SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;
  MuonRec->SetWriteESDfriend(kFALSE);
  MuonRec->SetCleanESD(kFALSE);  
  MuonRec->SetStopOnError(kFALSE);
  
  // uncomment the following lines if you want to set custom RecoParam
  // instead of getting them from the OCDB
  //  AliMUONRecoParam *muonRecoParam = AliMUONRecoParam::GetLowFluxParam();
  //  muonRecoParam->SaveFullClusterInESD(kTRUE,100.);
  //  MuonRec->SetRecoParam("MUON",muonRecoParam);
  
  MuonRec->Run();
  
  delete MuonRec;
  
  //gObjectTable->Print();
}

void rec() {

  AliReconstruction reco;

    reco.SetRunVertexFinder(kFALSE) ;
    reco.SetRunV0Finder(kFALSE) ;
    reco.SetRunMultFinder(kFALSE) ;

   AliQAManager::QAManager(AliQAv1::kSIMMODE) ;


  reco.SetCDBSnapshotMode("Sim/OCDBrec.root");
  reco.SetRunReconstruction("PHOS") ;
  reco.SetRunQA(":") ;
  reco.SetRunGlobalQA(kFALSE) ;

  TStopwatch timer;
  timer.Start();
  reco.Run();
  timer.Stop();
  timer.Print();
}

void recraw() {

	// AliReconstruction settings
  AliReconstruction reco;

  reco.SetWriteESDfriend(kTRUE);
  reco.SetWriteAlignmentData();
  reco.SetInput("raw.root");

  reco.SetDefaultStorage("local://$ALICE_ROOT/OCDB");
  reco.SetSpecificStorage("GRP/GRP/Data",
			  Form("local://%s/..",gSystem->pwd()));


  reco.SetUseTrackingErrorsForAlignment("ITS");
	
  // all events in one single file
  reco.SetNumberOfEventsPerFile(-1);

  // switch off cleanESD
  reco.SetCleanESD(kFALSE);
	
  reco.SetRunQA("ALL:ALL") ;

  reco.SetQARefDefaultStorage("local://$ALICE_ROOT/OCDB") ;
  for (Int_t det = 0 ; det < AliQA::kNDET ; det++) {
    reco.SetQACycles(det, 9999) ;
    reco.SetQAWriteExpert(det) ; 
  }
  
  AliLog::Flush();
	
  TStopwatch timer;
  timer.Start();
  reco.Run();
  timer.Stop();
  timer.Print();
}

//.........这里部分代码省略.........
  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // define the analysis chain to be run
  //
    
  int iMinSlice=0; 
  int iMaxSlice=35;
  int iMinPart=0;
  int iMaxPart=5;

  TString histogramHandlerInput1;
  TString histogramHandlerInput2;
  TString histogramHandlerOutput1;
  TString histogramHandlerOutput2;
  TString rootFileWriterInput1;
  TString rootFileWriterInput2;

  for (int slice=iMinSlice; slice<=iMaxSlice; slice++) {
    for (int part=iMinPart; part<=iMaxPart; part++) {
      TString clusterFinderOutput1;
      TString clusterFinderOutput2;
      TString clusterHistoInput1;
      TString clusterHistoInput2;
      TString clusterHistoOutput1;
      TString clusterHistoOutput2;
      TString arg, publisher;
      // digit publisher components
      int ddlno=768;
      if (part>1) ddlno+=72+4*slice+(part-2);
      else ddlno+=2*slice+part;
      arg.Form("-minid %d -datatype 'DDL_RAW ' 'TPC '  -dataspec 0x%02x%02x%02x%02x", ddlno, slice, slice, part, part);

      publisher.Form("DP_%02d_%d", slice, part);
      AliHLTConfiguration pubconf(publisher.Data(), "AliRawReaderPublisher", NULL , arg.Data());

      // first clusterfinder
      clusterFinderOutput1.Form("CF1_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(clusterFinderOutput1.Data(), "TPCClusterFinderDecoder", publisher.Data(), "-timebins 446");//-timebins set to simulated data
      if (clusterHistoInput1.Length()>0) clusterHistoInput1+=" ";
      clusterHistoInput1+=clusterFinderOutput1;

      // second clusterfinder
      clusterFinderOutput2.Form("CF2_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(clusterFinderOutput2.Data(), "TPCClusterFinderDecoder", publisher.Data(), "-timebins 446");//-timebins set to simulated data
      if (clusterHistoInput2.Length()>0) clusterHistoInput2+=" ";
      clusterHistoInput2+=clusterFinderOutput2;
    

      // first cluster histo component
      clusterHistoOutput1.Form("CH1_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(clusterHistoOutput1.Data(), "TPCClusterHisto", clusterHistoInput1.Data(), "");
      if (histogramHandlerInput1.Length()>0) histogramHandlerInput1+=" ";
      histogramHandlerInput1+=clusterHistoOutput1;

      //second cluster histo component
      clusterHistoOutput2.Form("CH2_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(clusterHistoOutput2.Data(), "TPCClusterHisto", clusterHistoInput2.Data(), "");
      if (histogramHandlerInput1.Length()>0) histogramHandlerInput1+=" ";
      histogramHandlerInput1+=clusterHistoOutput2;
      if (histogramHandlerInput2.Length()>0) histogramHandlerInput2+=" ";
      histogramHandlerInput2+=clusterHistoOutput2;

    }
  }
  
  // first histogram handler component
  histogramHandlerOutput1.Form("HH1_%02d_%d", slice, part);
  AliHLTConfiguration cfconf(histogramHandlerOutput1.Data(), "TPCHistogramHandler", histogramHandlerInput1.Data(), "-use-general");
  if (rootFileWriterInput1.Length()>0) rootFileWriterInput1+=" ";
  rootFileWriterInput1+=histogramHandlerOutput1;
  
  // second histogram handler component
  histogramHandlerOutput2.Form("HH2_%02d_%d", slice, part);
  AliHLTConfiguration cfconf(histogramHandlerOutput2.Data(), "TPCHistogramHandler", histogramHandlerInput2.Data(), "-use-general");
  if (rootFileWriterInput2.Length()>0) rootFileWriterInput2+=" ";
  rootFileWriterInput2+=histogramHandlerOutput2;
  
  AliHLTConfiguration rootFileWriter1("RootFileWriter1", "ROOTFileWriter", rootFileWriterInput1.Data() , "-datafile histogramHandlerFile1");

  AliHLTConfiguration rootFileWriter2("RootFileWriter2", "ROOTFileWriter", rootFileWriterInput2.Data() , "-datafile histogramHandlerFile2");


  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // Init and run the reconstruction
  // All but HLT reconstruction is switched off
  //
  AliReconstruction rec;
  rec.SetInput(input);
  rec.SetRunVertexFinder(kFALSE);
  rec.SetRunLocalReconstruction("HLT");
  rec.SetRunTracking("");
  rec.SetLoadAlignFromCDB(0);
  rec.SetRunQA(":");
  //rec.SetFillESD("HLT");
  rec.SetFillESD("");
  rec.SetFillTriggerESD(false);
  rec.SetOption("HLT", "libAliHLTUtil.so libAliHLTRCU.so libAliHLTTPC.so loglevel=0x7c chains=RootFileWriter1,RootFileWriter2");
  rec.Run();
}

// ---------------------------------------------------------------------------- 
void HLTT0Test(const Char_t *filename, const Char_t *cdbURI,
		  Int_t minEvent=-1, Int_t maxEvent=-1) {
  
  printf (" ============================================= \n\n");
  printf ("        TEST T0 RECONSTRUCTION              \n\n");
  printf (" ============================================= \n");

  if(!gSystem->AccessPathName("galice.root")){
    cerr << "AliReconstruction on raw data requires to delete galice.root, ";
    cerr << "or run at different place." << endl;
    cerr << "!!! DO NOT DELETE the galice.root of your simulation, ";
    cerr << "but create a subfolder !!!!" << endl;
    return;
  }
    TGrid::Connect("alien");

  if (gSystem->AccessPathName(filename)) {
    cerr << "can not find file " << filename << endl;
    return;
  }

  // -- connect to the GRID if we use a file or OCDB from the GRID
  TString struri=cdbURI;
  TString strfile=filename;
  if (struri.BeginsWith("raw://") ||
      strfile.Contains("://") && !strfile.Contains("local://")) {
    TGrid::Connect("alien");
  }

  // -- Set the CDB storage location
  AliCDBManager * man = AliCDBManager::Instance();
  man->SetDefaultStorage(cdbURI);
  if (struri.BeginsWith("local://")) {
    // set specific storage for GRP entry
    // search in the working directory and one level above, the latter
    // follows the standard simulation setup like e.g. in test/ppbench
    if (!gSystem->AccessPathName("GRP/GRP/Data")) {
      man->SetSpecificStorage("GRP/GRP/Data", "local://$PWD");
    } else if (!gSystem->AccessPathName("../GRP/GRP/Data")) {
      man->SetSpecificStorage("GRP/GRP/Data", "local://$PWD/..");      
    } else {
      cerr << "can not find a GRP entry, please run the macro in the folder" << endl;
      cerr << "of a simulated data sample, or specify a GRID OCDB" << endl;
      HLTT0Test();      
      return;
    }
  }

  //////////////////////////////////////////////////////////////////////////////////////
  //
  // Reconstruction settings
  AliReconstruction rec;

  if (minEvent>=0 || maxEvent>minEvent) {
    if (minEvent<0) minEvent=0;
    if (maxEvent<minEvent) maxEvent=minEvent;
    rec.SetEventRange(minEvent,maxEvent);
  }

  rec.SetRunReconstruction("HLT");
  rec.SetLoadAlignFromCDB(kFALSE);
  rec.SetWriteESDfriend(kFALSE);

  // due to bug ...
  // StopOnError needs to be disabled
  rec.SetStopOnError(kFALSE);
  rec.SetRunVertexFinder(kFALSE);
  rec.SetInput(filename);

  // QA options
  rec.SetRunQA(":") ;
  //rec.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;

  //////////////////////////////////////////////////////////////////////////////////////
  //
  // setup the HLT system
  AliHLTSystem* pHLT=AliHLTPluginBase::GetInstance();
  /*
  // define a data publisher configuration for T0 raw data
  AliHLTConfiguration publisher("RAW-Publisher", 
				"AliRawReaderPublisher", 
				"", 
				"-equipmentid 3584 "
				"-datatype 'DDL_RAW ' 'VZRO' "
				"-dataspec 0x01"
				);

  // define configuration of the T0Reconstruction component
  AliHLTConfiguration vzeroReco("T0-Reconstruction", 
				"T0Reconstruction", 
				"RAW-Publisher",
				""
				);

  // define configuration of the GlobalEsdConverter component
  AliHLTConfiguration esdConverter("GLOBAL-ESD-Converter",
				   "GlobalEsdConverter", 
				   "T0-Reconstruction",
				   ""
//.........这里部分代码省略.........

//.........这里部分代码省略.........
  int iMaxPart=5;
  TString writerInput;
  TString mergerInput;
  TString histoInput;
  TString histogramHandlerInputClusterFinder;
  TString cdumpInput;
  for (int slice=iMinSlice; slice<=iMaxSlice; slice++) {
    TString trackerInput;
    for (int part=iMinPart; part<=iMaxPart; part++) {
      TString arg, publisher, cf;
      TString clusterHistoOutput;
      // raw data publisher components
      int ddlno=768;
      if (part>1) ddlno+=72+4*slice+(part-2);
      else ddlno+=2*slice+part;
      arg.Form("-minid %d -datatype 'DDL_RAW ' 'TPC '  -dataspec 0x%02x%02x%02x%02x -verbose", ddlno, slice, slice, part, part);
      publisher.Form("DP_%02d_%d", slice, part);
      new AliHLTConfiguration(publisher.Data(), "AliRawReaderPublisher", NULL , arg.Data());

      // cluster finder components
      cf.Form("CF_%02d_%d", slice, part);
      new AliHLTConfiguration(cf.Data(), "TPCClusterFinder32Bit", publisher.Data(), "-solenoidBz -5");

      if (trackerInput.Length()>0) trackerInput+=" ";
      trackerInput+=cf;
      if (writerInput.Length()>0) writerInput+=" ";
      writerInput+=cf;
      if (histoInput.Length()>0) histoInput+=" ";
      histoInput+=cf;
      if (cdumpInput.Length()>0) cdumpInput+=" ";
      cdumpInput+=cf;
    }
    TString tracker;
    // tracker components
    tracker.Form("TR_%02d", slice);
    new AliHLTConfiguration(tracker.Data(), "TPCCATracker", trackerInput.Data(), "");

    if (writerInput.Length()>0) writerInput+=" ";
    writerInput+=tracker;
    if (mergerInput.Length()>0) mergerInput+=" ";
    mergerInput+=tracker;
    //add all slice tracks to histo input
    //if (histoInput.Length()>0) histoInput+=" ";
    //histoInput+=tracker;
  }

  // GlobalMerger component
    new AliHLTConfiguration("globalmerger","TPCCAGlobalMerger",mergerInput.Data(),"");
  
    //add all global tracks to histo input
  if (histoInput.Length()>0) histoInput+=" ";
  histoInput+="globalmerger";
  
  // specify whether to write all blocks separately or merge the tracks
  // and convert to ESD
  bool writeBlocks=false;

  // the esd converter configuration
  new AliHLTConfiguration("esd-converter", "GlobalEsdConverter"   , "globalmerger", "-fitTracksToVertex 1");
  
  new AliHLTConfiguration("global-vertexer", "GlobalVertexer"   , "esd-converter", "");
  
  new AliHLTConfiguration("v0HistoOut", "V0Histo"   , "global-vertexer", "");

  new AliHLTConfiguration("GVhistorootfile", "ROOTFileWriter", "global-vertexer" , "-datafile primaryVertexHistograms -concatenate-events -overwrite");
  
  new AliHLTConfiguration("v0historootfile", "ROOTFileWriter", "v0HistoOut" , "-datafile secondaryVertexHistograms -concatenate-events -overwrite");

  option+="v0historootfile";

  option+=",GVhistorootfile";

  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // Init and run the reconstruction
  // All but HLT reconstructio is switched off
  //
  AliReconstruction rec;


  rec.SetDefaultStorage("local://$ALICE_ROOT/OCDB");
  // rec.SetDefaultStorage("local://$HOME/HCDB"); 
  //rec.SetSpecificStorage("GRP/GRP/Data",
  //			 Form("local://%s",gSystem->pwd()));

  //  rec.SetSpecificStorage("GRP/GRP/Data","local:///opt/HLT-public/OCDB/LHC09c");
  //  rec.SetSpecificStorage("GRP/CTP/Config","local:///opt/HLT-public/OCDB/LHC09c");
  //  rec.SetSpecificStorage("GRP/CTP/Config", "local:///opt/HLT-public/rec/LHC09c/");

  rec.SetInput(input);
  rec.SetRunVertexFinder(kFALSE);
  rec.SetRunReconstruction("HLT");  //add TPC for comparison
  rec.SetLoadAlignFromCDB(0);
  rec.SetRunQA(":");
  rec.SetOption("HLT",option);
  // switch off cleanESD
  rec.SetCleanESD(kFALSE);
  //  rec.SetEventRange(0, 100);
  rec.Run();
}

void trackhisto(const char *filename, const char *cdbURI, int minEvent=-1, int maxEvent=-1, Bool_t bTracklets=kFALSE){

  if(!gSystem->AccessPathName("galice.root")){
    cerr << "Remove galice.root or run in a different folder." << endl;
    return;
  }

  if (!filename) {
    cerr << "please specify input or run without arguments" << endl;
    return;
  }
  

  ////////////////////////////////////////////////////////////////////
  //
  // init the HLT system in order to define the analysis chain below
  //
  ////////////////////////////////////////////////////////////////////
 
  
  AliHLTSystem *gHLT = AliHLTPluginBase::GetInstance();
 
  int iMinSlice =  0;
  int iMaxSlice = 35;
  int iMinPart  =  0;
  int iMaxPart  =  5;
  
  TString tracklets;
  
  for(int slice=iMinSlice; slice<=iMaxSlice; slice++){
      
      TString trackerInput;      
      for(int part=iMinPart; part<=iMaxPart; part++){
          
	  TString arg, publisher, cf;
          
          // raw data publisher components
          int ddlno=768;
          if (part>1) ddlno+=72+4*slice+(part-2);
          else ddlno+=2*slice+part;
      
          arg.Form("-minid %d -datatype 'DDL_RAW ' 'TPC '  -dataspec 0x%02x%02x%02x%02x -verbose", ddlno, slice, slice, part, part);
          publisher.Form("DP_%02d_%d", slice, part);
          AliHLTConfiguration pubconf(publisher.Data(), "AliRawReaderPublisher", NULL , arg.Data());

          // cluster finder components
          cf.Form("CF_%02d_%d", slice, part);
          AliHLTConfiguration cfconf(cf.Data(), "TPCClusterFinder32Bit", publisher.Data(), "");
     
          if (trackerInput.Length()>0) trackerInput+=" ";
          trackerInput+=cf;     
    }
    
    TString tracker, converted_tracklet;
    // tracker components
    tracker.Form("TR_%02d", slice);
    converted_tracklet.Form("CONVTR_%02d", slice);
    AliHLTConfiguration trackerconf(tracker.Data(), "TPCCATracker", trackerInput.Data(), "");
    AliHLTConfiguration convertedconf(converted_tracklet.Data(), "TPCCATrackerOutputConverter", tracker.Data(), "");    
       
    if (tracklets.Length()>0) tracklets+=" ";
    tracklets+=converted_tracklet;
  }
   
  TString histoInput;
   
  if(bTracklets==kTRUE){
     if(histoInput.Length()>0) 
     histoInput+=" ";
     histoInput+=tracklets;
     
     AliHLTConfiguration tracklethiconf("tracklethi", "TPCTrackHisto", histoInput.Data(), "");
     AliHLTConfiguration trackletrwfconf("trackletrfw", "ROOTFileWriter", "tracklethi", "-datafile TrackletHisto -concatenate-events -overwrite");
  }
  else {
     if(histoInput.Length()>0) 
     histoInput+=" ";
     histoInput+="TPC-clusters";
     histoInput+=" ";
     histoInput+="TPC-globalmerger";
  
     AliHLTConfiguration trhiconf("trhi", "TPCTrackHisto", histoInput.Data(), "");
     AliHLTConfiguration rwfconf("rfw", "ROOTFileWriter", "trhi", "-datafile TrackHisto -concatenate-events -overwrite");
  }


  AliReconstruction rec;

  rec.SetRunQA(":");
  rec.SetInput(filename);
  
  // connect to the GRID if we use a file or OCDB from the GRID
  TString struri  = cdbURI;
  TString strfile = filename;
  if(struri.BeginsWith("raw://") ||  strfile.Contains("://") && !strfile.Contains("local://")){
     TGrid::Connect("alien");
  }
  
  AliCDBManager *man = AliCDBManager::Instance();
  man->SetDefaultStorage(cdbURI);
//.........这里部分代码省略.........

//.........这里部分代码省略.........
    TGrid::Connect("alien");
  }

  // Set the CDB storage location
  AliCDBManager * man = AliCDBManager::Instance();
  man->SetDefaultStorage(cdbURI);
  if (struri.BeginsWith("local://")) {
    // set specific storage for GRP entry
    // search in the working directory and one level above, the latter
    // follows the standard simulation setup like e.g. in test/ppbench
    if (!gSystem->AccessPathName("GRP/GRP/Data")) {
      man->SetSpecificStorage("GRP/GRP/Data", "local://$PWD");
    } else if (!gSystem->AccessPathName("../GRP/GRP/Data")) {
      man->SetSpecificStorage("GRP/GRP/Data", "local://$PWD/..");      
    } else {
      cerr << "can not find a GRP entry, please run the macro in the folder" << endl;
      cerr << "of a simulated data sample, or specify a GRID OCDB" << endl;
      sampleRawAnalysis();      
      return;
    }
  }

  //////////////////////////////////////////////////////////////////////////////////////
  //
  // Reconstruction settings
  AliReconstruction rec;

  if (minEvent>=0 || maxEvent>minEvent) {
    if (minEvent<0) minEvent=0;
    if (maxEvent<minEvent) maxEvent=minEvent;
    rec.SetEventRange(minEvent,maxEvent);
  }
  rec.SetRunReconstruction("HLT");
  rec.SetLoadAlignFromCDB(kFALSE);
  rec.SetWriteESDfriend(kFALSE);
  // due to bug ...
  // StopOnError needs to be disabled
  rec.SetStopOnError(kFALSE);
  rec.SetRunVertexFinder(kFALSE);
  rec.SetInput(filename);

  // QA options
  rec.SetRunQA(":") ;
  //rec.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;

  //////////////////////////////////////////////////////////////////////////////////////
  //
  // setup the HLT system
  AliHLTSystem* pHLT=AliHLTPluginBase::GetInstance();

  // define a data publisher configuration
  // arguments:
  //  1) id of the configuartion, later used to refer to this configuration
  //  2) id of the component to run
  //  3) parents, no parents for publisher components
  //  4) optional component arguments
  //              publish link #512, the first link (numbered 0) of SSD
  AliHLTConfiguration publisher("RAW-Publisher", 
				"AliRawReaderPublisher", 
				"", 
				"-minid 512 "
				"-datatype 'DDL_RAW ' 'ISSD' "
				"-dataspec 0x01"
				);

  // define configuration of the SampleRawAnalyis component
  // arguments:
  //  1) id of the configuartion, later used to refer to this configuration
  //  2) id of the component to run
  //  3) parents, here the publisher configuration defined above
  //  4) optional component arguments
  AliHLTConfiguration rawanalysis("RAW-Analysis", 
				  "SampleRawAnalysis", 
				  "RAW-Publisher", 
				  "-mandatory1 test "
				  "-verbose"
				  );

  // set option for the HLT module in AliReconstruction
  // arguments
  //  - ignore-hltout : ignore the HLTOUT payload from the HLT DDLs
  //  - libraries to be used as plugins
  //  - loglevel=0x7c : Important, Info, Warning, Error, Fatal
  //  - chains=RAW-Analysis : chains to be run
  rec.SetOption("HLT",
		"ignore-hltout " 
		"libAliHLTUtil.so libAliHLTSample.so "
		"loglevel=0x7c "
		"chains=RAW-Analysis "
		);

  rec.SetRunPlaneEff(kFALSE);

  // switch off cleanESD
  rec.SetCleanESD(kFALSE);

  AliLog::Flush();
  rec.Run();

}

//.........这里部分代码省略.........
  //
  // Load some system libs for Grid and monitoring
  // Set the CDB storage location
  AliCDBManager * man = AliCDBManager::Instance();
  man->SetDefaultStorage(ocdb);
  // Reconstruction settings
  AliReconstruction rec;
  //
  // do we extract the TPC recpoints in advance
  Int_t preclustTPC = TString(gSystem->Getenv("preclusterizeTPC")).Atoi();
  Bool_t noTPCLocalRec = preclustTPC==1;
  if (noTPCLocalRec) printf("preclustTPC = %d: TPC local reconstruction assumed to be already done\n", preclustTPC);
  else printf("preclustTPC = %d: TPC local reconstruction assumed to NOT be already done\n", preclustTPC);
  //
  if (gSystem->Getenv("disableOuter")!=NULL){
    TString disOuter = gSystem->Getenv("disableOuter");
    TString disOuterLoc = disOuter;
    if (noTPCLocalRec) {
      disOuterLoc.ReplaceAll("TPC","");
      disOuterLoc.ReplaceAll("HLT","");
    }
    rec.SetRunReconstruction(disOuter.Data());
    rec.SetRunLocalReconstruction(disOuterLoc.Data());
  } 
  else if (noTPCLocalRec) {
    rec.SetRunReconstruction("ALL -HLT");
    rec.SetRunLocalReconstruction("ALL -TPC -HLT");
  }
  else {
    rec.SetRunLocalReconstruction("ALL");
  }

  // Upload CDB entries from the snapshot (local root file) if snapshot exist
  if (gSystem->AccessPathName("OCDB.root", kFileExists)==0) {        
    rec.SetDefaultStorage("local://");
    rec.SetCDBSnapshotMode("OCDB.root");
  }
  else {
    // setup ocdb by custom (if any) or default settings
    if (gSystem->AccessPathName("localOCDBaccessConfig.C", kFileExists)==0) {        
      gROOT->LoadMacro("localOCDBaccessConfig.C");
      localOCDBaccessConfig();
    }else { // default settings
      AliCDBManager* man = AliCDBManager::Instance();
      man->SetRaw(kTRUE);
    }
    TString cdbMode = gSystem->Getenv("OCDB_SNAPSHOT_CREATE");
    if (cdbMode == "kTRUE") {
      gROOT->LoadMacro("$ALIDPG_ROOT/MC/CreateSnapshot.C");
      CreateSnapshot("OCDB.root",filename);
      return;
    }
  }

  // All friends
  rec.SetFractionFriends(2.0);

 // AliReconstruction settings - hardwired MB trigger for calibration

  TString newfilename = filename;
  newfilename += options;
  rec.SetInput(newfilename.Data());

  // Set protection against too many events in a chunk (should not happen)
  if (nevents>0) rec.SetEventRange(0,nevents);

  // Remove recpoints after each event
  TString delRecPoints="TPC TRD ITS";
  if (noTPCLocalRec) delRecPoints.ReplaceAll("TPC","");
  rec.SetDeleteRecPoints(delRecPoints.Data()); 
  //


  // Switch off the V0 finder - saves time!
  //  rec.SetRunMultFinder(kFALSE);
  rec.SetRunV0Finder(kFALSE); 

  //
  // QA options - all QA is off
  //
  rec.SetRunQA(":");
  rec.SetRunGlobalQA(kFALSE);

  // AliReconstruction settings
  rec.SetWriteESDfriend(kTRUE);
  rec.SetWriteAlignmentData();
  rec.SetUseTrackingErrorsForAlignment("ITS");
  rec.SetCleanESD(kFALSE);

  // ITS options (see ALIROOT-7179)
  float itsErrY2[6]={0., 0., 0.1*0.1, 0.1*.1, 0.,0.};
  TVectorF *vecITSErrY2 = new TVectorF(6, itsErrY2);
  AliITSReconstructor::SetExtraErrorY2(vecITSErrY2);
  
  //Ignore SetStopOnError
  rec.SetStopOnError(kFALSE);

  AliLog::Flush();
  rec.Run();
}

void rec(const char *filename="raw.root", const char* options="")
{
  /////////////////////////////////////////////////////////////////////////////////////////
  //
  // Reconstruction script for RAW data
  //
  /////////////////////////////////////////////////////////////////////////////////////////

  
  AliReconstruction rec;
  // Set reconstruction flags (skip detectors here if neded with -<detector name>

  // do we extract the TPC recpoints in advance
  Int_t preclustTPC = TString(gSystem->Getenv("preclusterizeTPC")).Atoi();
  Bool_t noTPCLocalRec = preclustTPC==1;
  if (noTPCLocalRec) printf("preclustTPC = %d: TPC local reconstruction assumed to be already done\n", preclustTPC);
  else printf("preclustTPC = %d: TPC local reconstruction assumed to NOT be already done\n", preclustTPC);
  //
  if (noTPCLocalRec) {
    rec.SetRunReconstruction("ALL -HLT");
    rec.SetRunLocalReconstruction("ALL -TPC -HLT");
  }
  else {
    rec.SetRunLocalReconstruction("ALL");
  } 

  // Upload CDB entries from the snapshot (local root file) if snapshot exist
  if (gSystem->AccessPathName("OCDB.root", kFileExists)==0) {        
    rec.SetDefaultStorage("local://");
    rec.SetCDBSnapshotMode("OCDB.root");
  }
  else {
    // setup ocdb by custom (if any) or default settings
    if (gSystem->AccessPathName("OCDBconfig.C", kFileExists)==0) {
      gROOT->Macro("OCDBconfig.C");
    }
    else { // default settings
      AliCDBManager* man = AliCDBManager::Instance();
      man->SetRaw(kTRUE);
    }
    //
    TString cdbMode = gSystem->Getenv("OCDB_SNAPSHOT_CREATE");
    if (cdbMode == "kTRUE") {
      gROOT->LoadMacro("$ALIDPG_ROOT/MC/CreateSnapshot.C");
      CreateSnapshot("OCDB.root",filename);
      return;
    }
  }



  // removing apparently pile-up clusters to speadup reconstruction
  const double kZOutSectorCut = 3.; // cut on clusters on wrong side of CE (added to extendedRoadZ)
  AliTPCReconstructor::SetZOutSectorCut(kZOutSectorCut);


  // QA options
  //  rec.SetRunQA("Global:ESDs") ;
  //  rec.SetRunQA(":") ;
  //  rec.SetRunQA("ALL:ALL") ;
  rec.SetRunQA("Global MUON:ALL") ;
  rec.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;

  // AD stuff (see ALIROOT-6663)

  // rec.SetOption("AD", "+SaturationCorrection"); // --> not needed anymore, see https://alice.its.cern.ch/jira/browse/ALIROOT-6778

  // AliReconstruction settings
  rec.SetWriteESDfriend(kTRUE);
  rec.SetWriteAlignmentData();
  TString filenamewithopt = filename;
  filenamewithopt += options;
  rec.SetInput(filenamewithopt.Data());
  rec.SetUseTrackingErrorsForAlignment("ITS");

  // Specific AD storage, see https://alice.its.cern.ch/jira/browse/ALIROOT-6056
  //  rec.SetSpecificStorage("AD/Calib/TimeSlewing", "alien://Folder=/alice/simulation/2008/v4-15-Release/Ideal");

  // switch off cleanESD
  rec.SetCleanESD(kFALSE);

  //Ignore SetStopOnError
  rec.SetStopOnError(kFALSE);

  // Delete recpoints
  // Remove recpoints after each event
  TString delRecPoints="TPC TRD";
  if (noTPCLocalRec) delRecPoints.ReplaceAll("TPC","");
  rec.SetDeleteRecPoints(delRecPoints.Data()); 
  //

  // Set 0.7% as fraction of friends (Ruben, 2017-08-22)
  rec.SetFractionFriends(0.007);

  AliLog::Flush();
  rec.Run();

}

//.........这里部分代码省略.........
  AliHLTSystem* gHLT=AliHLTPluginBase::GetInstance();

  //gHLT.SwitchAliLog(0);

  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // define the analysis chain to be run
  //

  bool sectorClusterer=true; // run clusterer on sector or DDL level
  // check if the AliRawReaderMemory supports multiple buffers
  TClass* info=TClass::GetClass("AliRawReaderMemory");
  TList* methods=info->GetListOfAllPublicMethods();
  if (sectorClusterer && !methods->FindObject("AddBuffer")) {
    cerr << "warning: AliRawReaderMemory does not support multiple buffers, falling back to run clusterer on DDL level" << endl;
    sectorClusterer=false;
  }
 
  int iMinSlice=0;
  int iMaxSlice=35;
  int iMinPart=0;
  int iMaxPart=5;

  int DDLNoFromSlicePatch(int, int);

  TString writerInput;
  TString trackerInput;
  TString calibratorInput;

  for (int slice=iMinSlice; slice<=iMaxSlice; slice++) {
    TString arg, clustererInput;
    for (int part=iMinPart; part<=iMaxPart; part++) {
      TString publisher, cf;

      // raw data publisher components
      int ddlno=DDLNoFromSlicePatch(slice, part);
      arg.Form("-minid %d -datatype 'DDL_RAW ' 'TPC '  -dataspec 0x%02x%02x%02x%02x -verbose", ddlno, slice, slice, part, part);
      publisher.Form("DP_%02d_%d", slice, part);
      AliHLTConfiguration pubconf(publisher.Data(), "AliRawReaderPublisher", NULL , arg.Data());

      if (!sectorClusterer) {
      // cluster finder components
      cf.Form("CF_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(cf.Data(), "TPCOfflineClusterer", publisher.Data(), "");

      if (trackerInput.Length()>0) trackerInput+=" ";
      trackerInput+=cf;
      //if (writerInput.Length()>0) writerInput+=" ";
      //writerInput+=cf;
      } else {
	if (clustererInput.Length()>0) clustererInput+=" ";
	clustererInput+=publisher;
      }
    }
    if (sectorClusterer) {
      // cluster finder components
      cf.Form("CF_%02d", slice);
      AliHLTConfiguration cfconf(cf.Data(), "TPCOfflineClusterer", clustererInput.Data(), "");

      if (trackerInput.Length()>0) trackerInput+=" ";
      trackerInput+=cf;
    }
  }

  // one global tracker component
  TString tracker;
  tracker.Form("Global_TR");
  AliHLTConfiguration trackerconf(tracker.Data(), "TPCOfflineTrackerCalib", trackerInput.Data(), "");
  if (writerInput.Length()>0) writerInput+=" ";
  calibratorInput+=tracker;

  // one global calibration component
  TString calibrator;
  calibrator.Form("Global_Calib");
  AliHLTConfiguration calibconf(calibrator.Data(), "TPCOfflineCalibration", calibratorInput.Data(), "");
  if (writerInput.Length()>0) writerInput+=" ";
  writerInput+=calibrator;

  // the writer configuration
  AliHLTConfiguration rootfwconf("sink1", "ROOTFileWriter", writerInput.Data(), "-specfmt=_%d -subdir=out_%d -idfmt=_0x%08x");
  //AliHLTConfiguration esdwconf("sink1", "EsdCollector"   , writerInput.Data(), "-directory hlt-tpc-offline");

  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // Init and run the reconstruction
  // All but HLT reconstructio is switched off
  //
  AliReconstruction rec;
  rec.SetInput(input);
  rec.SetRunVertexFinder(kFALSE);
  rec.SetRunLocalReconstruction("HLT");
  rec.SetRunTracking("");
  rec.SetLoadAlignFromCDB(0);
  rec.SetFillESD("");
  rec.SetRunQA(":");
  rec.SetRunGlobalQA(kFALSE);
  rec.SetFillTriggerESD(kFALSE);
  rec.SetOption("HLT", "libAliHLTUtil.so libAliHLTRCU.so libANALYSIS.so libANALYSISalice.so libTPCcalib.so libAliHLTTPC.so loglevel=0x7c chains=sink1");
  rec.Run();
}

void main_recCPass1_OuterDet(const char *filename="raw.root",Int_t nevents=-1, const char *ocdb="raw://", Bool_t useFullITS=kFALSE)
{
  // Load some system libs for Grid and monitoring
  // Set the CDB storage location
  AliCDBManager * man = AliCDBManager::Instance();
  man->SetDefaultStorage(ocdb);
  // Reconstruction settings
  AliReconstruction rec;
  // Upload CDB entries from the snapshot (local root file) if snapshot exist
  if (gSystem->AccessPathName("OCDB.root", kFileExists)==0) {        
    man->SetDefaultStorage("local://");
    man->SetRaw(kFALSE);
    man->SetSnapshotMode("OCDB.root");
  }
  if (gSystem->AccessPathName("localOCDBaccessConfig.C", kFileExists)==0) {        
    gInterpreter->ProcessLine("localOCDBaccessConfig();");
  }

  if(!useFullITS){
    // only SPD-trackletting will be done
    printf("Special ITS configuration: only SPD-trackletting will be done\n");
    rec.SetRecoParam("ITS",GetSpecialITSRecoParam());
  }

  // All friends
  rec.SetFractionFriends(1.0);

 // AliReconstruction settings - hardwired MB trigger for calibration

  TString newfilename = filename;
  newfilename += "?Trigger=kCalibOuter";
  rec.SetInput(newfilename.Data());

  // Set protection against too many events in a chunk (should not happen)
  if (nevents>0) rec.SetEventRange(0,nevents);

  // Remove recpoints after each event
  rec.SetDeleteRecPoints("ITS MUON EMCAL PHOS VZERO T0");

  // Switch off the V0 finder - saves time!
  rec.SetRunV0Finder(kFALSE); 

  //
  // QA options - all QA is off
  //
  rec.SetRunQA(":");
  rec.SetRunGlobalQA(kFALSE);

  // AliReconstruction settings
  rec.SetWriteESDfriend(kFALSE);
  if(!useFullITS) rec.SetWriteAlignmentData(kFALSE);
  else rec.SetWriteAlignmentData();
  rec.SetUseTrackingErrorsForAlignment("ITS");
  rec.SetRunReconstruction("ITS MUON EMCAL PHOS VZERO T0");
  rec.SetFillESD("ITS MUON EMCAL PHOS VZERO T0");
  rec.SetCleanESD(kFALSE);

  // Specific reco params for ZDC (why isn't this automatic?)
//  rec.SetRecoParam("ZDC",AliZDCRecoParamPbPb::GetHighFluxParam(2760));

  //Ignore SetStopOnError
  rec.SetStopOnError(kFALSE);

  AliLog::Flush();
  rec.Run();
}