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Python Pipeline.stages方法代碼示例

本文整理匯總了Python中radical.entk.Pipeline.stages方法的典型用法代碼示例。如果您正苦於以下問題:Python Pipeline.stages方法的具體用法?Python Pipeline.stages怎麽用?Python Pipeline.stages使用的例子?那麽, 這裏精選的方法代碼示例或許可以為您提供幫助。您也可以進一步了解該方法所在radical.entk.Pipeline的用法示例。


在下文中一共展示了Pipeline.stages方法的3個代碼示例,這些例子默認根據受歡迎程度排序。您可以為喜歡或者感覺有用的代碼點讚,您的評價將有助於係統推薦出更棒的Python代碼示例。

示例1: test_pipeline_stage_assignment

# 需要導入模塊: from radical.entk import Pipeline [as 別名]
# 或者: from radical.entk.Pipeline import stages [as 別名]
def test_pipeline_stage_assignment():

    p = Pipeline()
    s = Stage()
    t = Task()
    t.executable = ['/bin/date']
    s.tasks = t
    p.stages = s

    assert type(p.stages) == list
    assert p._stage_count == 1
    assert p._cur_stage == 1
    assert p.stages[0] == s
開發者ID:radical-cybertools,項目名稱:radical.ensemblemd,代碼行數:15,代碼來源:test_pipeline.py

示例2: test_pipeline_assignment_exceptions

# 需要導入模塊: from radical.entk import Pipeline [as 別名]
# 或者: from radical.entk.Pipeline import stages [as 別名]
def test_pipeline_assignment_exceptions(t, l, i, b, se):

    p = Pipeline()

    data_type = [t, l, i, b, se]

    for data in data_type:

        if not isinstance(data, str):
            with pytest.raises(TypeError):
                p.name = data

        with pytest.raises(TypeError):
            p.stages = data

        with pytest.raises(TypeError):
            p.add_stages(data)
開發者ID:radical-cybertools,項目名稱:radical.ensemblemd,代碼行數:19,代碼來源:test_pipeline.py

示例3: test_create_cud_from_task

# 需要導入模塊: from radical.entk import Pipeline [as 別名]
# 或者: from radical.entk.Pipeline import stages [as 別名]
def test_create_cud_from_task():
    """
    **Purpose**: Test if the 'create_cud_from_task' function generates a RP ComputeUnitDescription with the complete
    Task description
    """

    pipeline = 'p1'
    stage = 's1'
    task = 't1'

    placeholder_dict = {
        pipeline: {
            stage: {
                task: '/home/vivek/some_file.txt'
            }
        }
    }

    t1 = Task()
    t1.name = 't1'
    t1.pre_exec = ['module load gromacs']
    t1.executable = ['grompp']
    t1.arguments = ['hello']
    t1.cpu_reqs = {'processes': 4,
                   'process_type': 'MPI',
                   'threads_per_process': 1,
                   'thread_type': 'OpenMP'
                   }
    t1.gpu_reqs = {'processes': 4,
                   'process_type': 'MPI',
                   'threads_per_process': 2,
                   'thread_type': 'OpenMP'
                   }
    t1.post_exec = ['echo test']

    t1.upload_input_data = ['upload_input.dat']
    t1.copy_input_data = ['copy_input.dat']
    t1.link_input_data = ['link_input.dat']
    t1.copy_output_data = ['copy_output.dat']
    t1.download_output_data = ['download_output.dat']

    p = Pipeline()
    p.name = 'p1'
    s = Stage()
    s.name = 's1'
    s.tasks = t1
    p.stages = s

    p._assign_uid('test')

    cud = create_cud_from_task(t1, placeholder_dict)

    assert cud.name == '%s,%s,%s,%s,%s,%s' % (t1.uid, t1.name,
                                              t1.parent_stage['uid'], t1.parent_stage['name'],
                                              t1.parent_pipeline['uid'], t1.parent_pipeline['name'])
    assert cud.pre_exec == t1.pre_exec

    # rp returns executable as a string regardless of whether assignment was using string or list
    assert cud.executable == t1.executable
    assert cud.arguments == t1.arguments
    assert cud.cpu_processes == t1.cpu_reqs['processes']
    assert cud.cpu_threads == t1.cpu_reqs['threads_per_process']
    assert cud.cpu_process_type == t1.cpu_reqs['process_type']
    assert cud.cpu_thread_type == t1.cpu_reqs['thread_type']
    assert cud.gpu_processes == t1.gpu_reqs['processes']
    assert cud.gpu_threads == t1.gpu_reqs['threads_per_process']
    assert cud.gpu_process_type == t1.gpu_reqs['process_type']
    assert cud.gpu_thread_type == t1.gpu_reqs['thread_type']
    assert cud.post_exec == t1.post_exec

    assert {'source': 'upload_input.dat', 'target': 'upload_input.dat'} in cud.input_staging
    assert {'source': 'copy_input.dat', 'action': rp.COPY, 'target': 'copy_input.dat'} in cud.input_staging
    assert {'source': 'link_input.dat', 'action': rp.LINK, 'target': 'link_input.dat'} in cud.input_staging
    assert {'source': 'copy_output.dat', 'action': rp.COPY, 'target': 'copy_output.dat'} in cud.output_staging
    assert {'source': 'download_output.dat', 'target': 'download_output.dat'} in cud.output_staging
開發者ID:radical-cybertools,項目名稱:radical.ensemblemd,代碼行數:77,代碼來源:test_tproc_rp.py


注:本文中的radical.entk.Pipeline.stages方法示例由純淨天空整理自Github/MSDocs等開源代碼及文檔管理平台,相關代碼片段篩選自各路編程大神貢獻的開源項目,源碼版權歸原作者所有,傳播和使用請參考對應項目的License;未經允許,請勿轉載。