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Python tools.selNSGA2方法代码示例

本文整理汇总了Python中deap.tools.selNSGA2方法的典型用法代码示例。如果您正苦于以下问题:Python tools.selNSGA2方法的具体用法?Python tools.selNSGA2怎么用?Python tools.selNSGA2使用的例子?那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在deap.tools的用法示例。


在下文中一共展示了tools.selNSGA2方法的3个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的Python代码示例。

示例1: _setup_toolbox

# 需要导入模块: from deap import tools [as 别名]
# 或者: from deap.tools import selNSGA2 [as 别名]
def _setup_toolbox(self):
        with warnings.catch_warnings():
            warnings.simplefilter('ignore')
            creator.create('FitnessMulti', base.Fitness, weights=(-1.0, 1.0))
            creator.create('Individual', gp.PrimitiveTree, fitness=creator.FitnessMulti, statistics=dict)

        self._toolbox = base.Toolbox()
        self._toolbox.register('expr', self._gen_grow_safe, pset=self._pset, min_=self._min, max_=self._max)
        self._toolbox.register('individual', tools.initIterate, creator.Individual, self._toolbox.expr)
        self._toolbox.register('population', tools.initRepeat, list, self._toolbox.individual)
        self._toolbox.register('compile', self._compile_to_sklearn)
        self._toolbox.register('select', tools.selNSGA2)
        self._toolbox.register('mate', self._mate_operator)
        if self.tree_structure:
            self._toolbox.register('expr_mut', self._gen_grow_safe, min_=self._min, max_=self._max + 1)
        else:
            self._toolbox.register('expr_mut', self._gen_grow_safe, min_=self._min, max_=self._max)
        self._toolbox.register('mutate', self._random_mutation_operator) 
开发者ID:EpistasisLab,项目名称:tpot,代码行数:20,代码来源:base.py

示例2: nsga2

# 需要导入模块: from deap import tools [as 别名]
# 或者: from deap.tools import selNSGA2 [as 别名]
def nsga2(self, fit_func, fit_func_args=[], init_pop=None, cxpb=0.95, mutpb=0.95):

        # init
        random.seed(self.seed)
        np.random.seed(self.seed)

        self.fit_func = fit_func
        self.fit_func_args = fit_func_args
        self.cxpb = cxpb  # cross probability
        self.mutpb = mutpb  # mutation probability

        self.init_deap_functions()
        self.toolbox.register("mate", tools.cxSimulatedBinaryBounded, low=self.bounds_min, up=self.bounds_max,
                              eta=1.0)  # crossover = mate
        self.toolbox.register("mutate", tools.mutPolynomialBounded, eta=10.0, low=self.bounds_min, up=self.bounds_max,
                              indpb=self.mutpb)
        # self.toolbox.register("preselect", tools.selTournamentDCD)
        self.toolbox.register("preselect", tools.selRandom)
        self.toolbox.register("select", tools.selNSGA2)

        if self.log_print: print("Number of used CPU: %i" % MPI_SIZE)

        # optimization
        result = self.optimize(init_pop)

        if self.log_print: print("End of (successful) evolution")

        result_nd = self.get_nondominated_inds(result)

        if self.log_file:
            fh1 = open(self.log_file, 'a')
            fh1.write("\n-------------------------- End of (successful) evolution --------------------------\n")
            fh1.write("\nNon dominated individuals\n")
            for ind in result_nd:
                fh1.write("ind --> fit_func: " + str(ind) + ' --> ' + str(ind.fitness.values) + '\n')
            fh1.close()

        return result_nd 
开发者ID:ocelot-collab,项目名称:ocelot,代码行数:40,代码来源:moga.py

示例3: test_nsga2

# 需要导入模块: from deap import tools [as 别名]
# 或者: from deap.tools import selNSGA2 [as 别名]
def test_nsga2():
    NDIM = 5
    BOUND_LOW, BOUND_UP = 0.0, 1.0
    MU = 16
    NGEN = 100

    toolbox = base.Toolbox()
    toolbox.register("attr_float", random.uniform, BOUND_LOW, BOUND_UP)
    toolbox.register("individual", tools.initRepeat, creator.__dict__[INDCLSNAME], toolbox.attr_float, NDIM)
    toolbox.register("population", tools.initRepeat, list, toolbox.individual)

    toolbox.register("evaluate", benchmarks.zdt1)
    toolbox.register("mate", tools.cxSimulatedBinaryBounded, low=BOUND_LOW, up=BOUND_UP, eta=20.0)
    toolbox.register("mutate", tools.mutPolynomialBounded, low=BOUND_LOW, up=BOUND_UP, eta=20.0, indpb=1.0/NDIM)
    toolbox.register("select", tools.selNSGA2)

    pop = toolbox.population(n=MU)
    fitnesses = toolbox.map(toolbox.evaluate, pop)
    for ind, fit in zip(pop, fitnesses):
        ind.fitness.values = fit

    pop = toolbox.select(pop, len(pop))
    for gen in range(1, NGEN):
        offspring = tools.selTournamentDCD(pop, len(pop))
        offspring = [toolbox.clone(ind) for ind in offspring]

        for ind1, ind2 in zip(offspring[::2], offspring[1::2]):
            if random.random() <= 0.9:
                toolbox.mate(ind1, ind2)

            toolbox.mutate(ind1)
            toolbox.mutate(ind2)
            del ind1.fitness.values, ind2.fitness.values

        invalid_ind = [ind for ind in offspring if not ind.fitness.valid]
        fitnesses = toolbox.map(toolbox.evaluate, invalid_ind)
        for ind, fit in zip(invalid_ind, fitnesses):
            ind.fitness.values = fit

        pop = toolbox.select(pop + offspring, MU)

    hv = hypervolume(pop, [11.0, 11.0])
    # hv = 120.777 # Optimal value

    assert hv > HV_THRESHOLD, "Hypervolume is lower than expected %f < %f" % (hv, HV_THRESHOLD)

    for ind in pop:
        assert not (any(numpy.asarray(ind) < BOUND_LOW) or any(numpy.asarray(ind) > BOUND_UP)) 
开发者ID:DEAP,项目名称:deap,代码行数:50,代码来源:test_algorithms.py


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