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Python Flags.get_start_end方法代码示例

本文整理汇总了Python中xia2.Handlers.Flags.Flags.get_start_end方法的典型用法代码示例。如果您正苦于以下问题:Python Flags.get_start_end方法的具体用法?Python Flags.get_start_end怎么用?Python Flags.get_start_end使用的例子?那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在xia2.Handlers.Flags.Flags的用法示例。


在下文中一共展示了Flags.get_start_end方法的1个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的Python代码示例。

示例1: setup_from_xinfo_file

# 需要导入模块: from xia2.Handlers.Flags import Flags [as 别名]
# 或者: from xia2.Handlers.Flags.Flags import get_start_end [as 别名]

#.........这里部分代码省略.........
          lattice = None

        # and also user supplied cell constants - from either
        # the xinfo file (the first port of call) or the
        # command-line.

        if crystals[crystal].has_key('user_cell'):
          cell = crystals[crystal]['user_cell']
        elif settings.unit_cell is not None:
          # XXX do we ever actually get here?
          cell = settings.unit_cell.parameters()
        else:
          cell = None

        dmin = wave_info.get('dmin', 0.0)
        dmax = wave_info.get('dmax', 0.0)

        if dmin == 0.0 and dmax == 0.0:
          dmin = Flags.get_resolution_high()
          dmax = Flags.get_resolution_low()

        # want to be able to locally override the resolution limits
        # for this sweep while leaving the rest for the data set
        # intact...

        for sweep_name in crystals[crystal]['sweeps'].keys():
          sweep_info = crystals[crystal]['sweeps'][sweep_name]

          sample_name = sweep_info.get('sample')
          if sample_name is None:
            if len(crystals[crystal]['samples']) == 1:
              sample_name = crystals[crystal]['samples'].keys()[0]
            else:
              raise RuntimeError('No sample given for sweep %s' %sweep_name)

          xsample = xc.get_xsample(sample_name)
          assert xsample is not None

          dmin_old = dmin
          dmax_old = dmax
          replace = False

          if 'RESOLUTION' in sweep_info:

            values = map(float, sweep_info['RESOLUTION'].split())
            if len(values) == 1:
              dmin = values[0]
            elif len(values) == 2:
              dmin = min(values)
              dmax = max(values)
            else:
              raise RuntimeError, \
                  'bad resolution for sweep %s' % sweep_name

            replace = True

          # FIXME: AJP to implement
          if 'ice' in sweep_info:
            pass
          if 'excluded_regions' in sweep_info:
            pass

          if sweep_info['wavelength'] == wavelength:

            frames_to_process = sweep_info.get('start_end')

            if not frames_to_process and Flags.get_start_end():
              frames_to_process = Flags.get_start_end()

            xsweep = xw.add_sweep(
              sweep_name,
              sample=xsample,
              directory = sweep_info.get('DIRECTORY'),
              image = sweep_info.get('IMAGE'),
              beam = sweep_info.get('beam'),
              reversephi = sweep_info.get('reversephi', False),
              distance = sweep_info.get('distance'),
              gain = float(sweep_info.get('GAIN', 0.0)),
              dmin = dmin, dmax = dmax,
              polarization = float(sweep_info.get(
                  'POLARIZATION', 0.0)),
              frames_to_process = frames_to_process,
              user_lattice = lattice,
              user_cell = cell,
              epoch = sweep_info.get('epoch', 0),
              ice = sweep_info.get('ice', False),
              excluded_regions = sweep_info.get(
                'excluded_regions', []),
              )

            xsample.add_sweep(xsweep)

          dmin = dmin_old
          dmax = dmax_old

        xc.add_wavelength(xw)

      self.add_crystal(xc)

    return
开发者ID:hainm,项目名称:xia2,代码行数:104,代码来源:XProject.py


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