Python TestFactory.import_sensors方法代码示例

# 需要导入模块: from tvb.tests.framework.core.test_factory import TestFactory [as 别名]
# 或者: from tvb.tests.framework.core.test_factory.TestFactory import import_sensors [as 别名]
    def test_launch(self):
        """
        Check that all required keys are present in output from BrainViewer launch.
        """
        zip_path = os.path.join(os.path.dirname(sensors_dataset.__file__),  'eeg_unitvector_62.txt.bz2')
        
        TestFactory.import_sensors(self.test_user, self.test_project, zip_path, 'EEG Sensors')
        sensors = TestFactory.get_entity(self.test_project, SensorsEEG())
        time_series = self.datatypeFactory.create_timeseries(self.connectivity, 'EEG', sensors)
        viewer = EegMonitor()
        result = viewer.launch(time_series)
        expected_keys = ['tsNames', 'groupedLabels', 'tsModes', 'tsStateVars', 'longestChannelLength',
                         'label_x', 'entities', 'page_size', 'number_of_visible_points',
                         'extended_view', 'initialSelection', 'ag_settings', 'ag_settings']

        for key in expected_keys:
            self.assertTrue(key in result, "key not found %s" % key)

        expected_ag_settings = ['channelsPerSet', 'channelLabels', 'noOfChannels', 'translationStep',
                                'normalizedSteps', 'nan_value_found', 'baseURLS', 'pageSize',
                                'nrOfPages', 'timeSetPaths', 'totalLength', 'number_of_visible_points',
                                'extended_view', 'measurePointsSelectionGIDs']

        ag_settings = json.loads(result['ag_settings'])

        for key in expected_ag_settings:
            self.assertTrue(key in ag_settings, "ag_settings should have the key %s" % key)

# 需要导入模块: from tvb.tests.framework.core.test_factory import TestFactory [as 别名]
# 或者: from tvb.tests.framework.core.test_factory.TestFactory import import_sensors [as 别名]
    def test_launch_EEG(self):
        """
        Check that all required keys are present in output from EegSensorViewer launch.
        """
        ## Import Sensors
        zip_path = os.path.join(os.path.dirname(sensors_dataset.__file__), 'EEG_unit_vectors_BrainProducts_62.txt.bz2')
        TestFactory.import_sensors(self.test_user, self.test_project, zip_path, Sensors_Importer.EEG_SENSORS)
        sensors = TestFactory.get_entity(self.test_project, SensorsEEG())

        ## Import EEGCap
        zip_path = os.path.join(os.path.dirname(surfaces_dataset.__file__), 'eeg_skin_surface.zip')
        TestFactory.import_surface_zip(self.test_user, self.test_project, zip_path, EEG_CAP, True)
        eeg_cap_surface = TestFactory.get_entity(self.test_project, EEGCap())

        viewer = EegSensorViewer()
        viewer.current_project_id = self.test_project.id

        ## Launch with EEG Cap selected
        result = viewer.launch(sensors, eeg_cap_surface)
        self.assert_compliant_dictionary(self.EXPECTED_KEYS_EEG, result)
        for key in ['urlVertices', 'urlTriangles', 'urlLines', 'urlNormals']:
            self.assertIsNotNone(result[key], "Value at key %s should not be None" % key)

        ## Launch without EEG Cap
        result = viewer.launch(sensors)
        self.assert_compliant_dictionary(self.EXPECTED_KEYS_EEG, result)
        for key in ['urlVertices', 'urlTriangles', 'urlLines', 'urlNormals']:
            self.assertTrue(not result[key] or result[key] == "[]",
                            "Value at key %s should be None or empty, but is %s" % (key, result[key]))

# 需要导入模块: from tvb.tests.framework.core.test_factory import TestFactory [as 别名]
# 或者: from tvb.tests.framework.core.test_factory.TestFactory import import_sensors [as 别名]
    def test_launch_internal(self):
        """
        Check that all required keys are present in output from InternalSensorViewer launch.
        """
        zip_path = os.path.join(os.path.dirname(sensors_dataset.__file__), 'internal_39.txt.bz2')
        TestFactory.import_sensors(self.test_user, self.test_project, zip_path, Sensors_Importer.INTERNAL_SENSORS)
        sensors = TestFactory.get_entity(self.test_project, SensorsInternal())

        viewer = InternalSensorViewer()
        viewer.current_project_id = self.test_project.id

        result = viewer.launch(sensors)
        self.assert_compliant_dictionary(self.EXPECTED_KEYS_INTERNAL, result)

# 需要导入模块: from tvb.tests.framework.core.test_factory import TestFactory [as 别名]
# 或者: from tvb.tests.framework.core.test_factory.TestFactory import import_sensors [as 别名]
    def test_launch_MEG(self):
        """
        Check that all required keys are present in output from MEGSensorViewer launch.
        """

        zip_path = os.path.join(os.path.dirname(sensors_dataset.__file__), 'meg_channels_reg13.txt.bz2')
        TestFactory.import_sensors(self.test_user, self.test_project, zip_path, Sensors_Importer.MEG_SENSORS)
        sensors = TestFactory.get_entity(self.test_project, SensorsMEG())

        viewer = MEGSensorViewer()
        viewer.current_project_id = self.test_project.id

        result = viewer.launch(sensors)
        self.assert_compliant_dictionary(self.EXPECTED_KEYS_MEG, result)

# 需要导入模块: from tvb.tests.framework.core.test_factory import TestFactory [as 别名]
# 或者: from tvb.tests.framework.core.test_factory.TestFactory import import_sensors [as 别名]
    def setUp(self):
        """
        Reset the database before each test.
        """
        self.test_user = TestFactory.create_user("UserPM")
        self.test_project = TestFactory.create_project(self.test_user)

        zip_path = os.path.join(os.path.dirname(tvb_data.sensors.__file__), "eeg_brainstorm_65.txt")
        TestFactory.import_sensors(self.test_user, self.test_project, zip_path, Sensors_Importer.EEG_SENSORS)

        zip_path = os.path.join(os.path.dirname(tvb_data.surfaceData.__file__), "cortex_16384.zip")
        TestFactory.import_surface_zip(self.test_user, self.test_project, zip_path, CORTICAL, True)

        self.surface = TestFactory.get_entity(self.test_project, CorticalSurface())
        self.assertTrue(self.surface is not None)
        self.sensors = TestFactory.get_entity(self.test_project, SensorsEEG())
        self.assertTrue(self.sensors is not None)