Python tensor.tile函数代码示例

  def fwd(self, x, V, A, L):
    """
    x : signal
    V : eigenvectors
    A : area 
    L : eigenvalues
    """
    V = V[:,:self.K]
    L = L[:self.K]

    L = L.dimshuffle('x','x',0)

    rho = T.sqrt(T.sum(A))
   
    # Q x 1 x K, a window for each input function
    ghat = self.activation_interp(
            T.batched_dot(T.tile(L, [self.nin,1,1]), self.Winterp))
    # Q x K x N
    V_ = T.tile(V.dimshuffle('x',1,0), [self.nin, 1, 1])
    # Q x K x N
    tmp = (ghat * V).dimshuffle(0,2,1)
    
    # Q x N x N
    transl = rho * T.batched_dot(V_.dimshuffle(0,2,1), tmp)
    transl = A.dimshuffle('x',0,'x') * transl
    
    # Q x K x N
    tmp = (V.dimshuffle(0,'x',1) * x.dimshuffle(0,1,'x')).dimshuffle(1,2,0)
    # Q x K x N
    desc = rho * T.batched_dot(tmp, transl)
    desc = T.abs_(desc)
    
    desc = desc.dimshuffle(2,0,'x',1) # BC01 format : N x Q x 1 x K
    return self.activation(theano.tensor.nnet.conv.conv2d(desc, self.W).flatten(2) + self.b)

    def setup_generate(self):

        # dimensions: (batch, time, 12)
        chord_types = T.btensor3()

        # dimensions: (batch, time)
        chord_roots = T.imatrix()

        n_batch, n_time = chord_roots.shape

        specs = [lstmstack.prepare_sample_scan(  start_pos=T.alloc(np.array(encoding.STARTING_POSITION, np.int32), (n_batch)),
                                                    start_out=T.tile(encoding.initial_encoded_form(), (n_batch,1)),
                                                    timestep=T.tile(T.arange(n_time), (n_batch,1)),
                                                    cur_chord_type=chord_types,
                                                    cur_chord_root=chord_roots,
                                                    deterministic_dropout=True )
                    for lstmstack, encoding in zip(self.lstmstacks, self.encodings)]

        updates, all_chosen, all_probs, indiv_probs = helper_generate_from_spec(specs, self.lstmstacks, self.encodings, self.srng, n_batch, n_time, self.bounds, self.normalize_artic_only)

        self.generate_fun = theano.function(
            inputs=[chord_roots, chord_types],
            updates=updates,
            outputs=all_chosen,
            allow_input_downcast=True,
            mode=(NanGuardMode(nan_is_error=True, inf_is_error=True, big_is_error=True) if self.nanguard else None))

        self.generate_visualize_fun = theano.function(
            inputs=[chord_roots, chord_types],
            updates=updates,
            outputs=[all_chosen, all_probs] + indiv_probs,
            allow_input_downcast=True,
            mode=(NanGuardMode(nan_is_error=True, inf_is_error=True, big_is_error=True) if self.nanguard else None))

    def make_gaussian_filter(self):
        W_shape = self.get_W_shape()
        k = self.filter_size[0]
        k_low = int(np.floor(-(k-1)/2))
        k_high = k_low+k

        W_std = T.exp(self.W_logstd)
        std_array = T.tile(
            W_std.dimshuffle('x', 0, 'x'),
            (self.num_input_channels, 1, k)
        )

        x = np.arange(k_low, k_high).reshape((1, 1, -1))
        x = T.tile(
            x, (self.num_input_channels, self.num_input_channels, 1)
        ).astype(floatX)

        p1 = (1./(np.sqrt(2.*np.pi))).astype(floatX)
        p2 = np.asarray(2., dtype=floatX)
        gf = (p1/std_array)*T.exp(-x**2/(p2*(std_array**2)))
        # gf = gf.astype(theano.config.floatX)

        mask = np.zeros(W_shape)
        rg = np.arange(self.num_input_channels)
        mask[rg, rg, :] = 1
        mask = mask.astype(floatX)

        gf = gf*mask

        return gf

    def output_probabilistic(self, m_x, v_x):

        m_linear = T.dot(m_x, self.m_W[ 0, :, : ]) + T.tile(self.m_b[ 0, :, : ], [ m_x.shape[ 0 ], 1 ])
        v_linear = T.dot(m_x**2, self.v_W[ 0, :, : ]) + T.dot(v_x, self.m_W[ 0, :, : ]**2) + T.dot(v_x, self.v_W[ 0, :, : ]) + \
            T.tile(self.v_b[ 0, :, : ], [ m_x.shape[ 0 ], 1 ])

        if not self.output_layer:

            # We compute the mean and variance after the ReLU activation

            alpha = m_linear / T.sqrt(v_linear)
            gamma = Network_layer.gamma(-alpha)
            gamma_robust = -alpha - 1.0 / alpha + 2.0 / alpha**3
            gamma_final = T.switch(T.lt(-alpha, T.fill(alpha, 30)), gamma, gamma_robust)

            v_aux = m_linear + T.sqrt(v_linear) * gamma_final

            m_a = Network_layer.n_cdf(alpha) * v_aux
            v_a = m_a * v_aux * Network_layer.n_cdf(-alpha) + Network_layer.n_cdf(alpha) * v_linear * (1 - gamma_final * (gamma_final + alpha))

            return (m_a, v_a)

        else:

            return (m_linear, v_linear)

 def apply(self, v):
     [h_vals, _], _ = theano.scan(fn=self.step, 
                                     sequences = v, 
                                     outputs_info = [T.tile(self.h0, (v.shape[1], 1)),
                                                     T.tile(self.c0, (v.shape[1], 1))] 
                                 )
     return h_vals

def lcn_3d_input(data, kernel_shape, n_maps):

    """
    :param data: [examples, depth, filters, height, width]
    :param kernel_shape: int
    :param n_maps: int
    :return: new_x: [examples, depth, filters, height, width]
    """

    # create symbolic variable for the input data
    ftensor5 = T.TensorType('float32', [False] * 5)
    x = ftensor5()

    # # determine the number of maps
    # n_maps = data.shape[2]

    # create 3d filter that spans across all channels / feature maps
    # todo: kernel is not really in 3d; need 3d implementation instead of 2d repeated across third dimension
    # todo: alternative is to keep 2d kernel and extend short range given data size in z-plane; change first kernel_sh.
    filter_shape = (1, kernel_shape[0], n_maps, kernel_shape[1], kernel_shape[2])
    filters = np.resize(gaussian_filter(kernel_shape[1]), filter_shape)
    filters = filters / np.sum(filters)
    filters = sharedX(filters)

    # convolve filter with input signal
    convolution_out = conv3d(
        signals=x,
        filters=filters,
        signals_shape=data.shape,
        filters_shape=filter_shape,
        border_mode='valid'
    )

    # for each pixel, remove mean of 9x9 neighborhood
    mid_0 = int(np.floor(kernel_shape[0] / 2.))
    mid_1 = int(np.floor(kernel_shape[1] / 2.))
    mid_2 = int(np.floor(kernel_shape[2] / 2.))
    mean = T.tile(convolution_out, (1, 1, n_maps, 1, 1))
    padded_mean = T.zeros_like(x)
    padded_mean = T.set_subtensor(padded_mean[:, mid_0:-mid_0, :, mid_1:-mid_1, mid_2:-mid_2], mean)
    centered_data = data - padded_mean

    # scale down norm of 9x9 patch if norm is bigger than 1
    sum_sqr_xx = conv3d(signals=T.sqr(data), filters=filters)
    denominator = T.tile(T.sqrt(sum_sqr_xx), (1, 1, n_maps, 1, 1))
    padded_denominator = T.ones_like(x)
    padded_denominator = T.set_subtensor(
        padded_denominator[:, mid_0:-mid_0, :, mid_1:-mid_1, mid_2:-mid_2], denominator
    )
    per_img_mean = padded_denominator.mean(axis=[1, 2, 3, 4])
    divisor = T.largest(
        per_img_mean.dimshuffle(0, 'x', 'x', 'x', 'x'),
        padded_denominator
    )
    new_x = centered_data / T.maximum(1., divisor)

    # compile theano function
    f = theano.function([x], new_x)

    return f(data)

    def est_log_part_fun(self):
        # init first visible data 
        v_mean = T.nnet.softmax(self.base_vbias)[0]
        v_mean_rep = T.tile(v_mean, (self.numruns,)).reshape((self.numruns, self.model.num_vis))
        D = T.tile(T.sum(self.base_vbias, axis=0).dimshuffle('x'), (self.numruns,))
        v_samples, updates = theano.scan(fn=self.multinom_sampler,non_sequences=[v_mean_rep, D], n_steps=10)        
       
        v = v_samples[-1]
        # init logw with beta = 0
        logw = - self.log_p_k(v, 0., D) 
        
        [logw_list, vs, Ds], updates = theano.scan(self.ais_step, sequences = self.betas[1:], outputs_info = [logw, v, None])
        
        logw = logw_list[-1]
        v = vs[-1]
        D = Ds[-1] 
        
        logw += self.log_p_k(v, 1, D)            
        r = logsum(logw) - T.log(self.numruns) 

        log_z_base = T.sum(T.log(1+T.exp(self.base_vbias))) + (self.model.num_hid)*T.log(2)
        log_z_est = r + log_z_base
        
        perform_fun = theano.function([], log_z_est, updates=updates)

        return perform_fun()

 def recurrence(x_t, h_tm1, c_tm1):
     i = T.nnet.sigmoid(T.dot(x_t, self.wi) + T.dot(h_tm1, self.wih) + self.bi)  # input gate
     c_proposed = T.tanh(T.dot(x_t, self.wc) + T.dot(h_tm1, self.wch) + self.bc)  # proposed memory cell content
     f = T.nnet.sigmoid(T.dot(x_t, self.wf) + T.dot(h_tm1, self.wfh) + self.bf)  # forget gate
     c_t = (T.tile(i, self.memory_size) * c_proposed) + (T.tile(f, self.memory_size) * c_tm1)  # new memory cell content
     o = T.nnet.sigmoid(T.dot(x_t, self.wo) + T.dot(h_tm1, self.woh) + self.bo)  # output gate
     h_t = T.tile(o, self.memory_size) * T.tanh(c_t)
     return [h_t, c_t]

    def setup_generate(self):

        # dimensions: (batch, time, 12)
        chord_types = T.btensor3()

        # dimensions: (batch, time)
        chord_roots = T.imatrix()

        n_batch, n_time = chord_roots.shape

        spec = self.lstmstack.prepare_sample_scan(  start_pos=T.alloc(np.array(self.encoding.STARTING_POSITION, np.int32), (n_batch)),
                                                    start_out=T.tile(self.encoding.initial_encoded_form(), (n_batch,1)),
                                                    timestep=T.tile(T.arange(n_time), (n_batch,1)),
                                                    cur_chord_type=chord_types,
                                                    cur_chord_root=chord_roots,
                                                    deterministic_dropout=True )

        def _scan_fn(*inputs):
            # inputs is [ spec_sequences..., last_absolute_position, spec_taps..., spec_non_sequences... ]
            inputs = list(inputs)
            last_absolute_chosen = inputs.pop(len(spec.sequences))
            scan_rout = self.lstmstack.sample_scan_routine(spec, *inputs)

            last_rel_pos, last_out, cur_kwargs = scan_rout.send(None)

            new_pos = self.encoding.get_new_relative_position(last_absolute_chosen, last_rel_pos, last_out, self.bounds.lowbound, self.bounds.highbound, **cur_kwargs)
            addtl_kwargs = {
                "last_output": last_out
            }

            out_activations = scan_rout.send((new_pos, addtl_kwargs))
            out_probs = self.encoding.decode_to_probs(out_activations,new_pos,self.bounds.lowbound, self.bounds.highbound)
            sampled_note = Encoding.sample_absolute_probs(self.srng, out_probs)
            encoded_output = self.encoding.note_to_encoding(sampled_note, new_pos, self.bounds.lowbound, self.bounds.highbound)
            scan_outputs = scan_rout.send(encoded_output)
            scan_rout.close()

            return [sampled_note, out_probs] + scan_outputs

        outputs_info = [{"initial":T.zeros((n_batch,),'int32'), "taps":[-1]}, None] + spec.outputs_info
        result, updates = theano.scan(fn=_scan_fn, sequences=spec.sequences, non_sequences=spec.non_sequences, outputs_info=outputs_info)
        all_chosen = result[0].dimshuffle((1,0))
        all_probs = result[1].dimshuffle((1,0,2))

        self.generate_fun = theano.function(
            inputs=[chord_roots, chord_types],
            updates=updates,
            outputs=all_chosen,
            allow_input_downcast=True,
            mode=(NanGuardMode(nan_is_error=True, inf_is_error=True, big_is_error=True) if self.nanguard else None))

        self.generate_visualize_fun = theano.function(
            inputs=[chord_roots, chord_types],
            updates=updates,
            outputs=[all_chosen, all_probs],
            allow_input_downcast=True,
            mode=(NanGuardMode(nan_is_error=True, inf_is_error=True, big_is_error=True) if self.nanguard else None))

def mmd_full(x_t, y_t, alpha=0.5):
    """ Implementation of the full kernel MMD statistic (gaussian kernel)"""
    N = x_t.shape[1]
    M = y_t.shape[1]

    term1 = T.mean(T.exp(-0.5 * (1 / alpha) * T.square(T.repeat(x_t, N) - T.tile(x_t, N))))
    term2 = T.mean(T.exp(-0.5 * (1 / alpha) * T.square(T.repeat(x_t, M) - T.tile(y_t, N))))
    term3 = T.mean(T.exp(-0.5 * (1 / alpha) * T.square(T.repeat(y_t, M) - T.tile(y_t, M))))
    return term1 - 2 * term2 + term3

def IRNN(n_input, n_hidden, n_output, input_type='real', out_every_t=False, loss_function='CE'):
    np.random.seed(1234)
    rng = np.random.RandomState(1234)

    x, y = initialize_data_nodes(loss_function, input_type, out_every_t)
    inputs = [x, y]

    h_0 = theano.shared(np.zeros((1, n_hidden), dtype=theano.config.floatX))
    V = initialize_matrix(n_input, n_hidden, 'V', rng)
    W = theano.shared(np.identity(n_hidden, dtype=theano.config.floatX))
    out_mat = initialize_matrix(n_hidden, n_output, 'out_mat', rng)
    hidden_bias = theano.shared(np.zeros((n_hidden,), dtype=theano.config.floatX))
    out_bias = theano.shared(np.zeros((n_output,), dtype=theano.config.floatX))

    parameters = [h_0, V, W, out_mat, hidden_bias, out_bias]

    def recurrence(x_t, y_t, h_prev, cost_prev, acc_prev, V, W, hidden_bias, out_mat, out_bias):
        if loss_function == 'CE':
            data_lin_output = V[x_t]
        else:
            data_lin_output = T.dot(x_t, V)

        h_t = T.nnet.relu(T.dot(h_prev, W) + data_lin_output + hidden_bias.dimshuffle('x', 0))
        if out_every_t:
            lin_output = T.dot(h_t, out_mat) + out_bias.dimshuffle('x', 0)
            cost_t, acc_t = compute_cost_t(lin_output, loss_function, y_t)
        else:
            cost_t = theano.shared(NP_FLOAT(0.0))
            acc_t = theano.shared(NP_FLOAT(0.0))

        return h_t, cost_t, acc_t

    non_sequences = [V, W, hidden_bias, out_mat, out_bias]

    h_0_batch = T.tile(h_0, [x.shape[1], 1])

    if out_every_t:
        sequences = [x, y]
    else:
        sequences = [x, T.tile(theano.shared(np.zeros((1,1), dtype=theano.config.floatX)), [x.shape[0], 1, 1])]

    outputs_info = [h_0_batch, theano.shared(NP_FLOAT(0.0)), theano.shared(NP_FLOAT(0.0))]

    [hidden_states, cost_steps, acc_steps], updates = theano.scan(fn=recurrence,
                                                                  sequences=sequences,
                                                                  non_sequences=non_sequences,
                                                                  outputs_info = outputs_info)

    if not out_every_t:
        lin_output = T.dot(hidden_states[-1,:,:], out_mat) + out_bias.dimshuffle('x', 0)
        costs = compute_cost_t(lin_output, loss_function, y)
    else:
        cost = cost_steps.mean()
        accuracy = acc_steps.mean()
        costs = [cost, accuracy]

    return inputs, parameters, costs

def weighted_binary_cross_entropy_4(pred, target, class_normalization):
    # Mix of 0 and 2
    # From theano
    DIM = pred.shape[1]
    BATCH_SIZE = pred.shape[0]
    N_on_per_batch = (T.transpose(T.tile(target.sum(axis=1), (DIM, 1))) + 1)
    N_off_per_batch = (T.transpose(T.tile((1-target).sum(axis=1), (DIM, 1))) + 1)
    class_norm_tile = T.tile(class_normalization, (BATCH_SIZE, 1))
    return -(class_norm_tile * target * T.log(pred) / N_on_per_batch + (1.0 - target) * T.log(1.0 - pred) / N_off_per_batch)

def get_input_vectors(shape, phases, scaling, offset):
    x = T.repeat(offset[0] + T.arange(shape[0]) / scaling, shape[1] * phases).reshape(
        (shape[0], shape[1], phases)) * T.pow(2, T.arange(phases))
    y = T.repeat(T.tile(offset[1] + T.arange(shape[1]) / scaling, shape[0]).reshape(
        (shape[0], shape[1], 1)), phases, axis=2) * T.pow(2, T.arange(phases))
    z = T.tile(offset[2] + 10 * T.arange(phases), shape[0] * shape[1]).reshape((shape[0], shape[1], phases, 1))
    x = x.reshape((shape[0], shape[1], phases, 1))
    y = y.reshape((shape[0], shape[1], phases, 1))
    return T.concatenate([x, y, z], axis=3).reshape((shape[0] * shape[1] * phases, 3)).astype('float32')

 def initial_states(self, batch_size, *args, **kwargs):
     states_dict = self.fst.expand({self.fst.fst.start: 0.0})
     states = tensor.as_tensor_variable(
         self.transition.pad(states_dict.keys(), NOT_STATE))
     states = tensor.tile(states[None, :], (batch_size, 1))
     weights = tensor.as_tensor_variable(
         self.transition.pad(states_dict.values(), 0))
     weights = tensor.tile(weights[None, :], (batch_size, 1))
     add = self.probability_computer(states, weights)
     return states, weights, add

    def __init__(self, rng, input, num_filters, input_shape):
        self.K = num_filters
        self.N = input_shape[2] * input_shape[3]
        self.D = input_shape[1]
        self.B = input_shape[0]

        self.input = input

        filter_shape = (self.K, self.D, 1, 1)

        fan_in = numpy.prod(filter_shape[1:])
        fan_out = (filter_shape[0] * numpy.prod(filter_shape[2:]))

        W_bound = numpy.sqrt(6. / (fan_in + fan_out))
        self.W = theano.shared(
            numpy.asarray(
                rng.uniform(low=-W_bound, high=W_bound, size=filter_shape),
                dtype=theano.config.floatX
            ),
            borrow=True
        )
        b_values = numpy.zeros((filter_shape[0],), dtype=theano.config.floatX)
        self.b = theano.shared(value=b_values, borrow=True)

        c_bound = numpy.sqrt(1. / (self.K * self.D))
        self.c = theano.shared(
            numpy.asarray(
                rng.uniform(low=-c_bound, high=c_bound, size=(self.K, self.D)),
                dtype=theano.config.floatX
            ),
            borrow=True
        )
        conved = conv2d(input, self.W,
            input_shape=input_shape,
			filter_shape=filter_shape)

        conved = conved + self.b.dimshuffle('x', 0, 'x', 'x')
        conved = conved.reshape((self.B, self.K, self.N))
        a = self.softmax3d(conved)

        x = input.reshape((self.B, self.D, self.N))

        v = theano.shared(numpy.zeros((self.B, self.K, self.D), dtype=theano.config.floatX))

        for k in range(self.K):
            ar = T.tile(a[:,k], (1,self.D)).reshape((self.B, self.D, self.N))
            cr = T.tile(self.c[k].reshape((1,self.D,1)), (self.B, 1, self.N))
            vr = (ar*(x+cr)).sum(2)
            g = T.sqrt((vr**2).sum(1))  # add eps?
            v = T.set_subtensor(v[:,k,:], vr/T.tile(g.reshape((self.B, 1)), (1, self.D)))

        # v = v/T.sqrt((v**2).sum())  # whole normalize
        self.output = v
        self.params = [self.W, self.b, self.c]