Python math_ops.reduce_logsumexp函数代码示例

 def _forward(state_log_prob, obs_log_prob):
   state_log_prob = array_ops.expand_dims(state_log_prob, axis=1)  # Broadcast.
   state_log_prob += state_trans_log_probs
   state_log_prob = math_ops.reduce_logsumexp(state_log_prob, axis=-1)
   state_log_prob += obs_log_prob
   log_prob_sum = math_ops.reduce_logsumexp(
       state_log_prob, axis=-1, keepdims=True)
   state_log_prob -= log_prob_sum
   return state_log_prob

def _compute_energy_change(current_target_log_prob,
                           current_momentums,
                           proposed_target_log_prob,
                           proposed_momentums,
                           independent_chain_ndims,
                           name=None):
  """Helper to `kernel` which computes the energy change."""
  with ops.name_scope(
      name, "compute_energy_change",
      ([current_target_log_prob, proposed_target_log_prob,
        independent_chain_ndims] +
       current_momentums + proposed_momentums)):
    # Abbreviate lk0=log_kinetic_energy and lk1=proposed_log_kinetic_energy
    # since they're a mouthful and lets us inline more.
    lk0, lk1 = [], []
    for current_momentum, proposed_momentum in zip(current_momentums,
                                                   proposed_momentums):
      axis = math_ops.range(independent_chain_ndims,
                            array_ops.rank(current_momentum))
      lk0.append(_log_sum_sq(current_momentum, axis))
      lk1.append(_log_sum_sq(proposed_momentum, axis))

    lk0 = -np.log(2.) + math_ops.reduce_logsumexp(array_ops.stack(lk0, axis=-1),
                                                  axis=-1)
    lk1 = -np.log(2.) + math_ops.reduce_logsumexp(array_ops.stack(lk1, axis=-1),
                                                  axis=-1)
    lp0 = -current_target_log_prob   # log_potential
    lp1 = -proposed_target_log_prob  # proposed_log_potential
    x = array_ops.stack([lp1, math_ops.exp(lk1), -lp0, -math_ops.exp(lk0)],
                        axis=-1)

    # The sum is NaN if any element is NaN or we see both +Inf and -Inf.
    # Thus we will replace such rows with infinite energy change which implies
    # rejection. Recall that float-comparisons with NaN are always False.
    is_sum_determinate = (
        math_ops.reduce_all(math_ops.is_finite(x) | (x >= 0.), axis=-1) &
        math_ops.reduce_all(math_ops.is_finite(x) | (x <= 0.), axis=-1))
    is_sum_determinate = array_ops.tile(
        is_sum_determinate[..., array_ops.newaxis],
        multiples=array_ops.concat([
            array_ops.ones(array_ops.rank(is_sum_determinate),
                           dtype=dtypes.int32),
            [4],
        ], axis=0))
    x = array_ops.where(is_sum_determinate,
                        x,
                        array_ops.fill(array_ops.shape(x),
                                       value=x.dtype.as_numpy_dtype(np.inf)))

    return math_ops.reduce_sum(x, axis=-1)

def _state_to_olabel(labels, num_labels, states):
  """Sum state log probs to ilabel log probs."""

  num_label_states = _get_dim(labels, 1) + 1
  label_states = states[:, :, 1:num_label_states]
  blank_states = states[:, :, num_label_states:]
  one_hot = array_ops.one_hot(
      labels - 1, depth=(num_labels - 1),
      on_value=0.0, off_value=math_ops.log(0.0))
  one_hot = array_ops.expand_dims(one_hot, axis=0)
  label_states = array_ops.expand_dims(label_states, axis=3)
  label_olabels = math_ops.reduce_logsumexp(label_states + one_hot, axis=2)
  blank_olabels = math_ops.reduce_logsumexp(
      blank_states, axis=2, keepdims=True)
  return array_ops.concat([blank_olabels, label_olabels], axis=-1)

def _sum_states(idx, states):
  """Take logsumexp for each unique state out of all label states.

  Args:
    idx: tensor of shape [batch, label_length] For each sequence, indices into a
      set of unique labels as computed by calling unique.
    states: tensor of shape [frames, batch, label_length] Log probabilities for
      each label state.

  Returns:
    tensor of shape [frames, batch_size, label_length], log probabilites summed
      for each unique label of the sequence.
  """

  with ops.name_scope("sum_states"):
    idx = ops.convert_to_tensor(idx, name="idx")
    num_states = _get_dim(states, 2)
    states = array_ops.expand_dims(states, axis=2)
    one_hot = array_ops.one_hot(
        idx,
        depth=num_states,
        on_value=0.0,
        off_value=math_ops.log(0.0),
        axis=1)
    return math_ops.reduce_logsumexp(states + one_hot, axis=-1)

def _state_to_olabel_unique(labels, num_labels, states, unique):
  """Sum state log probs to ilabel log probs using unique label indices."""

  num_label_states = _get_dim(labels, 1) + 1
  label_states = states[:, :, 1:num_label_states]
  blank_states = states[:, :, num_label_states:]

  unique_y, unique_idx = unique
  mul_reduce = _sum_states(unique_idx, label_states)

  num_frames = states.shape[0]
  batch_size = states.shape[1]
  num_states = num_label_states - 1
  batch_state_major = array_ops.transpose(mul_reduce, perm=[1, 2, 0])
  batch_state_major = array_ops.reshape(
      batch_state_major, [batch_size * num_states, num_frames])
  batch_offset = math_ops.range(batch_size, dtype=unique_y.dtype) * num_labels
  indices = unique_y + array_ops.expand_dims(batch_offset, axis=-1)
  indices = array_ops.reshape(indices, [-1, 1])
  scatter = array_ops.scatter_nd(
      indices=indices,
      updates=batch_state_major,
      shape=[batch_size * num_labels, num_frames])
  scatter = array_ops.reshape(scatter, [batch_size, num_labels, num_frames])
  scatter = array_ops.where(
      math_ops.equal(scatter, 0.0),
      array_ops.fill(array_ops.shape(scatter), math_ops.log(0.0)),
      scatter)
  label_olabels = array_ops.transpose(scatter, [2, 0, 1])
  label_olabels = label_olabels[:, :, 1:]

  blank_olabels = math_ops.reduce_logsumexp(
      blank_states, axis=2, keepdims=True)

  return array_ops.concat([blank_olabels, label_olabels], axis=-1)

 def _define_score_samples(self):
   """Defines the likelihood of each data sample."""
   op = []
   for shard_id, prior_probs in enumerate(self._prior_probs):
     op.append(prior_probs + math_ops.log(self._w[shard_id]))
   self._scores = array_ops.squeeze(
       math_ops.reduce_logsumexp(op, axis=2, keepdims=True), axis=0)

def crf_log_norm(inputs, sequence_lengths, transition_params):
  """Computes the normalization for a CRF.

  Args:
    inputs: A [batch_size, max_seq_len, num_tags] tensor of unary potentials
        to use as input to the CRF layer.
    sequence_lengths: A [batch_size] vector of true sequence lengths.
    transition_params: A [num_tags, num_tags] transition matrix.
  Returns:
    log_norm: A [batch_size] vector of normalizers for a CRF.
  """
  # Split up the first and rest of the inputs in preparation for the forward
  # algorithm.
  first_input = array_ops.slice(inputs, [0, 0, 0], [-1, 1, -1])
  first_input = array_ops.squeeze(first_input, [1])
  rest_of_input = array_ops.slice(inputs, [0, 1, 0], [-1, -1, -1])

  # Compute the alpha values in the forward algorithm in order to get the
  # partition function.
  forward_cell = CrfForwardRnnCell(transition_params)
  _, alphas = rnn.dynamic_rnn(
      cell=forward_cell,
      inputs=rest_of_input,
      sequence_length=sequence_lengths - 1,
      initial_state=first_input,
      dtype=dtypes.float32)
  log_norm = math_ops.reduce_logsumexp(alphas, [1])
  return log_norm

  def testCrfLogLikelihood(self):
    inputs = np.array(
        [[4, 5, -3], [3, -1, 3], [-1, 2, 1], [0, 0, 0]], dtype=np.float32)
    transition_params = np.array(
        [[-3, 5, -2], [3, 4, 1], [1, 2, 1]], dtype=np.float32)
    sequence_lengths = np.array(3, dtype=np.int32)
    num_words = inputs.shape[0]
    num_tags = inputs.shape[1]
    with self.test_session() as sess:
      all_sequence_log_likelihoods = []

      # Make sure all probabilities sum to 1.
      for tag_indices in itertools.product(
          range(num_tags), repeat=sequence_lengths):
        tag_indices = list(tag_indices)
        tag_indices.extend([0] * (num_words - sequence_lengths))
        sequence_log_likelihood, _ = crf.crf_log_likelihood(
            inputs=array_ops.expand_dims(inputs, 0),
            tag_indices=array_ops.expand_dims(tag_indices, 0),
            sequence_lengths=array_ops.expand_dims(sequence_lengths, 0),
            transition_params=constant_op.constant(transition_params))
        all_sequence_log_likelihoods.append(sequence_log_likelihood)
      total_log_likelihood = math_ops.reduce_logsumexp(
          all_sequence_log_likelihoods)
      tf_total_log_likelihood = sess.run(total_log_likelihood)
      self.assertAllClose(tf_total_log_likelihood, 0.0)

 def _log_variance(self):
   # Following calculation is based on law of total variance:
   #
   # Var[Z] = E[Var[Z | V]] + Var[E[Z | V]]
   #
   # where,
   #
   # Z|v ~ interpolate_affine[v](distribution)
   # V ~ mixture_distribution
   #
   # thus,
   #
   # E[Var[Z | V]] = sum{ prob[d] Var[d] : d=0, ..., deg-1 }
   # Var[E[Z | V]] = sum{ prob[d] (Mean[d] - Mean)**2 : d=0, ..., deg-1 }
   v = array_ops.stack([
       # log(self.distribution.variance()) = log(Var[d]) = log(rate[d])
       self._log_rate,
       # log((Mean[d] - Mean)**2)
       2. * math_ops.log(
           math_ops.abs(self.distribution.mean()
                        - self._mean()[..., array_ops.newaxis])),
   ], axis=-1)
   return math_ops.reduce_logsumexp(
       self.mixture_distribution.logits[..., array_ops.newaxis] + v,
       axis=[-2, -1])

 def _log_cdf(self, x):
   x = self._pad_sample_dims(x)
   log_cdf_x = self.components_distribution.log_cdf(x)      # [S, B, k]
   log_mix_prob = nn_ops.log_softmax(
       self.mixture_distribution.logits, axis=-1)           # [B, k]
   return math_ops.reduce_logsumexp(
       log_cdf_x + log_mix_prob, axis=-1)                   # [S, B]

 def testReduceLogSumExp(self):
   for dtype in [np.float16, np.float32, np.double]:
     x_np = np.random.rand(5, 5).astype(dtype)
     with self.test_session(use_gpu=True):
       y_tf_np = math_ops.reduce_logsumexp(x_np).eval()
       y_np = log(np.sum(exp(x_np)))
       self.assertAllClose(y_tf_np, y_np)

 def _single_seq_fn():
   log_norm = math_ops.reduce_logsumexp(first_input, [1])
   # Mask `log_norm` of the sequences with length <= zero.
   log_norm = array_ops.where(math_ops.less_equal(sequence_lengths, 0),
                              array_ops.zeros_like(log_norm),
                              log_norm)
   return log_norm

  def __call__(self, inputs, state, scope=None):
    """Build the CrfForwardRnnCell.

    Args:
      inputs: A [batch_size, num_tags] matrix of unary potentials.
      state: A [batch_size, num_tags] matrix containing the previous alpha
          values.
      scope: Unused variable scope of this cell.

    Returns:
      new_alphas, new_alphas: A pair of [batch_size, num_tags] matrices
          values containing the new alpha values.
    """
    state = array_ops.expand_dims(state, 2)

    # This addition op broadcasts self._transitions_params along the zeroth
    # dimension and state along the second dimension. This performs the
    # multiplication of previous alpha values and the current binary potentials
    # in log space.
    transition_scores = state + self._transition_params
    new_alphas = inputs + math_ops.reduce_logsumexp(transition_scores, [1])

    # Both the state and the output of this RNN cell contain the alphas values.
    # The output value is currently unused and simply satisfies the RNN API.
    # This could be useful in the future if we need to compute marginal
    # probabilities, which would require the accumulated alpha values at every
    # time step.
    return new_alphas, new_alphas

  def testCrfLogNorm(self):
    inputs = np.array(
        [[4, 5, -3], [3, -1, 3], [-1, 2, 1], [0, 0, 0]], dtype=np.float32)
    transition_params = np.array(
        [[-3, 5, -2], [3, 4, 1], [1, 2, 1]], dtype=np.float32)
    num_words = inputs.shape[0]
    num_tags = inputs.shape[1]
    sequence_lengths = np.array(3, dtype=np.int32)
    with self.test_session() as sess:
      all_sequence_scores = []

      # Compare the dynamic program with brute force computation.
      for tag_indices in itertools.product(
          range(num_tags), repeat=sequence_lengths):
        tag_indices = list(tag_indices)
        tag_indices.extend([0] * (num_words - sequence_lengths))
        all_sequence_scores.append(
            crf.crf_sequence_score(
                inputs=array_ops.expand_dims(inputs, 0),
                tag_indices=array_ops.expand_dims(tag_indices, 0),
                sequence_lengths=array_ops.expand_dims(sequence_lengths, 0),
                transition_params=constant_op.constant(transition_params)))

      brute_force_log_norm = math_ops.reduce_logsumexp(all_sequence_scores)
      log_norm = crf.crf_log_norm(
          inputs=array_ops.expand_dims(inputs, 0),
          sequence_lengths=array_ops.expand_dims(sequence_lengths, 0),
          transition_params=constant_op.constant(transition_params))
      log_norm = array_ops.squeeze(log_norm, [0])
      tf_brute_force_log_norm, tf_log_norm = sess.run(
          [brute_force_log_norm, log_norm])

      self.assertAllClose(tf_log_norm, tf_brute_force_log_norm)

 def testKeepDims(self):
   for dtype in [np.float16, np.float32, np.double]:
     x_np = np.random.rand(5, 5).astype(dtype)
     with self.test_session(use_gpu=True):
       y_tf_np = math_ops.reduce_logsumexp(x_np, keepdims=True).eval()
       self.assertEqual(y_tf_np.ndim, x_np.ndim)
       y_np = log(np.sum(exp(x_np), keepdims=True))
       self.assertAllClose(y_tf_np, y_np)