本文整理汇总了Python中qiita_db.metadata_template.SampleTemplate.items方法的典型用法代码示例。如果您正苦于以下问题：Python SampleTemplate.items方法的具体用法？Python SampleTemplate.items怎么用？Python SampleTemplate.items使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类qiita_db.metadata_template.SampleTemplate的用法示例。
在下文中一共展示了SampleTemplate.items方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: TestSampleTemplate
# 需要导入模块: from qiita_db.metadata_template import SampleTemplate [as 别名]
# 或者: from qiita_db.metadata_template.SampleTemplate import items [as 别名]
#.........这里部分代码省略.........
def test_keys(self):
"""keys returns an iterator over the sample ids"""
obs = self.tester.keys()
self.assertTrue(isinstance(obs, Iterable))
self.assertEqual(set(obs), self.exp_sample_ids)
def test_values(self):
"""values returns an iterator over the values"""
obs = self.tester.values()
self.assertTrue(isinstance(obs, Iterable))
exp = {Sample('SKB1.640202', self.tester),
Sample('SKB2.640194', self.tester),
Sample('SKB3.640195', self.tester),
Sample('SKB4.640189', self.tester),
Sample('SKB5.640181', self.tester),
Sample('SKB6.640176', self.tester),
Sample('SKB7.640196', self.tester),
Sample('SKB8.640193', self.tester),
Sample('SKB9.640200', self.tester),
Sample('SKD1.640179', self.tester),
Sample('SKD2.640178', self.tester),
Sample('SKD3.640198', self.tester),
Sample('SKD4.640185', self.tester),
Sample('SKD5.640186', self.tester),
Sample('SKD6.640190', self.tester),
Sample('SKD7.640191', self.tester),
Sample('SKD8.640184', self.tester),
Sample('SKD9.640182', self.tester),
Sample('SKM1.640183', self.tester),
Sample('SKM2.640199', self.tester),
Sample('SKM3.640197', self.tester),
Sample('SKM4.640180', self.tester),
Sample('SKM5.640177', self.tester),
Sample('SKM6.640187', self.tester),
Sample('SKM7.640188', self.tester),
Sample('SKM8.640201', self.tester),
Sample('SKM9.640192', self.tester)}
# Creating a list and looping over it since unittest does not call
# the __eq__ function on the objects
for o, e in zip(sorted(list(obs), key=lambda x: x.id),
sorted(exp, key=lambda x: x.id)):
self.assertEqual(o, e)
def test_items(self):
"""items returns an iterator over the (key, value) tuples"""
obs = self.tester.items()
self.assertTrue(isinstance(obs, Iterable))
exp = [('SKB1.640202', Sample('SKB1.640202', self.tester)),
('SKB2.640194', Sample('SKB2.640194', self.tester)),
('SKB3.640195', Sample('SKB3.640195', self.tester)),
('SKB4.640189', Sample('SKB4.640189', self.tester)),
('SKB5.640181', Sample('SKB5.640181', self.tester)),
('SKB6.640176', Sample('SKB6.640176', self.tester)),
('SKB7.640196', Sample('SKB7.640196', self.tester)),
('SKB8.640193', Sample('SKB8.640193', self.tester)),
('SKB9.640200', Sample('SKB9.640200', self.tester)),
('SKD1.640179', Sample('SKD1.640179', self.tester)),
('SKD2.640178', Sample('SKD2.640178', self.tester)),
('SKD3.640198', Sample('SKD3.640198', self.tester)),
('SKD4.640185', Sample('SKD4.640185', self.tester)),
('SKD5.640186', Sample('SKD5.640186', self.tester)),
('SKD6.640190', Sample('SKD6.640190', self.tester)),
('SKD7.640191', Sample('SKD7.640191', self.tester)),
('SKD8.640184', Sample('SKD8.640184', self.tester)),
('SKD9.640182', Sample('SKD9.640182', self.tester)),
('SKM1.640183', Sample('SKM1.640183', self.tester)),
('SKM2.640199', Sample('SKM2.640199', self.tester)),
('SKM3.640197', Sample('SKM3.640197', self.tester)),
('SKM4.640180', Sample('SKM4.640180', self.tester)),
('SKM5.640177', Sample('SKM5.640177', self.tester)),
('SKM6.640187', Sample('SKM6.640187', self.tester)),
('SKM7.640188', Sample('SKM7.640188', self.tester)),
('SKM8.640201', Sample('SKM8.640201', self.tester)),
('SKM9.640192', Sample('SKM9.640192', self.tester))]
# Creating a list and looping over it since unittest does not call
# the __eq__ function on the objects
for o, e in zip(sorted(list(obs)), sorted(exp)):
self.assertEqual(o, e)
def test_get(self):
"""get returns the correct sample object"""
obs = self.tester.get('SKM7.640188')
exp = Sample('SKM7.640188', self.tester)
self.assertEqual(obs, exp)
def test_get_none(self):
"""get returns none if the sample id is not present"""
self.assertTrue(self.tester.get('Not_a_Sample') is None)
def test_to_file(self):
"""to file writes a tab delimited file with all the metadata"""
fd, fp = mkstemp()
close(fd)
st = SampleTemplate.create(self.metadata, self.new_study)
st.to_file(fp)
self._clean_up_files.append(fp)
with open(fp, 'U') as f:
obs = f.read()
self.assertEqual(obs, EXP_SAMPLE_TEMPLATE)