本文整理汇总了Python中qiita_db.analysis.Analysis.summary_data方法的典型用法代码示例。如果您正苦于以下问题：Python Analysis.summary_data方法的具体用法？Python Analysis.summary_data怎么用？Python Analysis.summary_data使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类qiita_db.analysis.Analysis的用法示例。
在下文中一共展示了Analysis.summary_data方法的2个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: TestAnalysis
# 需要导入模块: from qiita_db.analysis import Analysis [as 别名]
# 或者: from qiita_db.analysis.Analysis import summary_data [as 别名]
#.........这里部分代码省略.........
"A New Analysis", Analysis(1))
self.assertEqual(new.jobs, None)
def test_retrieve_pmid(self):
self.assertEqual(self.analysis.pmid, "121112")
def test_retrieve_pmid_none(self):
new = Analysis.create(User("[email protected]"), "newAnalysis",
"A New Analysis", Analysis(1))
self.assertEqual(new.pmid, None)
def test_set_pmid(self):
self.analysis.pmid = "11211221212213"
self.assertEqual(self.analysis.pmid, "11211221212213")
def test_retrieve_mapping_file(self):
exp = join(self.fp, "1_analysis_mapping.txt")
obs = self.analysis.mapping_file
self.assertEqual(obs, exp)
self.assertTrue(exists(exp))
def test_retrieve_mapping_file_none(self):
new = Analysis.create(User("[email protected]"), "newAnalysis",
"A New Analysis", Analysis(1))
obs = new.mapping_file
self.assertEqual(obs, None)
# def test_get_parent(self):
# raise NotImplementedError()
# def test_get_children(self):
# raise NotImplementedError()
def test_summary_data(self):
obs = self.analysis.summary_data()
exp = {'studies': 1,
'processed_data': 1,
'samples': 5}
self.assertEqual(obs, exp)
def test_add_samples(self):
new = Analysis.create(User("[email protected]"), "newAnalysis",
"A New Analysis")
new.add_samples({1: ['1.SKB8.640193', '1.SKD5.640186']})
obs = new.samples
self.assertEqual(obs.keys(), [1])
self.assertItemsEqual(obs[1], ['1.SKB8.640193', '1.SKD5.640186'])
def test_remove_samples_both(self):
self.analysis.remove_samples(proc_data=(1, ),
samples=('1.SKB8.640193', ))
exp = {1: ['1.SKD8.640184', '1.SKB7.640196', '1.SKM9.640192',
'1.SKM4.640180']}
self.assertEqual(self.analysis.samples, exp)
def test_remove_samples_samples(self):
self.analysis.remove_samples(samples=('1.SKD8.640184', ))
exp = {1: ['1.SKB8.640193', '1.SKB7.640196', '1.SKM9.640192',
'1.SKM4.640180']}
self.assertEqual(self.analysis.samples, exp)
def test_remove_samples_processed_data(self):
self.analysis.remove_samples(proc_data=(1, ))
exp = {}
self.assertEqual(self.analysis.samples, exp)
示例2: TestAnalysis
# 需要导入模块: from qiita_db.analysis import Analysis [as 别名]
# 或者: from qiita_db.analysis.Analysis import summary_data [as 别名]
#.........这里部分代码省略.........
"A New Analysis", Analysis(1))
self.assertEqual(new.jobs, [])
def test_retrieve_pmid(self):
self.assertEqual(self.analysis.pmid, "121112")
def test_retrieve_pmid_none(self):
new = Analysis.create(User("[email protected]"), "newAnalysis",
"A New Analysis", Analysis(1))
self.assertEqual(new.pmid, None)
def test_set_pmid(self):
self.analysis.pmid = "11211221212213"
self.assertEqual(self.analysis.pmid, "11211221212213")
def test_retrieve_mapping_file(self):
exp = join(self.fp, "1_analysis_mapping.txt")
obs = self.analysis.mapping_file
self.assertEqual(obs, exp)
self.assertTrue(exists(exp))
def test_retrieve_mapping_file_none(self):
new = Analysis.create(User("[email protected]"), "newAnalysis",
"A New Analysis", Analysis(1))
obs = new.mapping_file
self.assertEqual(obs, None)
# def test_get_parent(self):
# raise NotImplementedError()
# def test_get_children(self):
# raise NotImplementedError()
def test_summary_data(self):
obs = self.analysis.summary_data()
exp = {'studies': 1,
'processed_data': 1,
'samples': 5}
self.assertEqual(obs, exp)
def test_add_samples(self):
new = Analysis.create(User("[email protected]"), "newAnalysis",
"A New Analysis")
new.add_samples({1: ['1.SKB8.640193', '1.SKD5.640186']})
obs = new.samples
self.assertEqual(obs.keys(), [1])
self.assertItemsEqual(obs[1], ['1.SKB8.640193', '1.SKD5.640186'])
def test_remove_samples_both(self):
self.analysis.remove_samples(proc_data=(1, ),
samples=('1.SKB8.640193', ))
exp = {1: ['1.SKD8.640184', '1.SKB7.640196', '1.SKM9.640192',
'1.SKM4.640180']}
self.assertEqual(self.analysis.samples, exp)
def test_remove_samples_samples(self):
self.analysis.remove_samples(samples=('1.SKD8.640184', ))
exp = {1: ['1.SKB8.640193', '1.SKB7.640196', '1.SKM9.640192',
'1.SKM4.640180']}
self.assertEqual(self.analysis.samples, exp)
def test_remove_samples_processed_data(self):
self.analysis.remove_samples(proc_data=(1, ))
exp = {}
self.assertEqual(self.analysis.samples, exp)