本文整理汇总了Python中qiime.sdk.Artifact.peek方法的典型用法代码示例。如果您正苦于以下问题:Python Artifact.peek方法的具体用法?Python Artifact.peek怎么用?Python Artifact.peek使用的例子?那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类qiime.sdk.Artifact
的用法示例。
在下文中一共展示了Artifact.peek方法的5个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: inspect_artifact
# 需要导入模块: from qiime.sdk import Artifact [as 别名]
# 或者: from qiime.sdk.Artifact import peek [as 别名]
def inspect_artifact(uuid):
try:
metadata = Artifact.peek(ARTIFACTS[uuid])
except Exception:
abort(404)
return jsonify({'uuid': metadata.uuid, 'type': metadata.type})
示例2: test_peek
# 需要导入模块: from qiime.sdk import Artifact [as 别名]
# 或者: from qiime.sdk.Artifact import peek [as 别名]
def test_peek(self):
artifact = Artifact.import_data(FourInts, [0, 0, 42, 1000])
fp = os.path.join(self.test_dir.name, 'artifact.qza')
artifact.save(fp)
metadata = Artifact.peek(fp)
self.assertIsInstance(metadata, ResultMetadata)
self.assertEqual(metadata.type, 'FourInts')
self.assertEqual(metadata.uuid, str(artifact.uuid))
self.assertEqual(metadata.format, 'FourIntsDirectoryFormat')
示例3: test_peek
# 需要导入模块: from qiime.sdk import Artifact [as 别名]
# 或者: from qiime.sdk.Artifact import peek [as 别名]
def test_peek(self):
artifact = Artifact._from_view([0, 0, 42, 1000], FourInts, None)
fp = os.path.join(self.test_dir.name, 'artifact.qza')
artifact.save(fp)
metadata = Artifact.peek(fp)
self.assertIsInstance(metadata, ResultMetadata)
self.assertEqual(metadata.type, FourInts)
self.assertIsNone(metadata.provenance)
self.assertEqual(metadata.uuid, artifact.uuid)
示例4: test_peek_with_provenance
# 需要导入模块: from qiime.sdk import Artifact [as 别名]
# 或者: from qiime.sdk.Artifact import peek [as 别名]
def test_peek_with_provenance(self):
artifact = Artifact._from_view({'foo': 'bar', 'baz': 'bazz'}, Mapping,
self.provenance)
fp = os.path.join(self.test_dir.name, 'artifact.qza')
artifact.save(fp)
metadata = Artifact.peek(fp)
self.assertIsInstance(metadata, ResultMetadata)
self.assertEqual(metadata.type, Mapping)
self.assertEqual(metadata.provenance, self.provenance)
self.assertEqual(metadata.uuid, artifact.uuid)
示例5: get_artifacts
# 需要导入模块: from qiime.sdk import Artifact [as 别名]
# 或者: from qiime.sdk.Artifact import peek [as 别名]
def get_artifacts():
global ARTIFACTS
ARTIFACTS = {}
path = os.getcwd()
artifact_paths = list(glob.glob(os.path.join(path, '*.qza')))
artifacts = []
for artifact_path in artifact_paths:
try:
metadata = Artifact.peek(artifact_path)
name, _ = os.path.splitext(os.path.basename(artifact_path))
artifacts.append(
_result_record(metadata, name, '.inspect_artifact'))
ARTIFACTS[str(metadata.uuid)] = artifact_path
except Exception:
pass # TODO: do better things when this happens
return jsonify({'artifacts': artifacts})