本文整理汇总了Python中pycbc.workflow.core.Node.add_input_list_opt方法的典型用法代码示例。如果您正苦于以下问题：Python Node.add_input_list_opt方法的具体用法？Python Node.add_input_list_opt怎么用？Python Node.add_input_list_opt使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类pycbc.workflow.core.Node的用法示例。
在下文中一共展示了Node.add_input_list_opt方法的6个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: create_node
# 需要导入模块: from pycbc.workflow.core import Node [as 别名]
# 或者: from pycbc.workflow.core.Node import add_input_list_opt [as 别名]
def create_node(self, stat_files, tags=None):
if tags is None:
tags = []
node = Node(self)
node.add_input_list_opt('--statmap-files', stat_files)
node.new_output_file_opt(stat_files[0].segment, '.hdf', '--output-file', tags=tags)
return node示例2: create_node
# 需要导入模块: from pycbc.workflow.core import Node [as 别名]
# 或者: from pycbc.workflow.core.Node import add_input_list_opt [as 别名]
def create_node(self, trig_files, inj_files, seg_dir, tags=[]):
node = Node(self)
# Set input / output options
node.add_input_list_opt('--input-files', trig_files)
node.add_input_list_opt('--inj-files', inj_files)
node.add_opt('--ifo-tag', self.ifos)
node.add_opt('--exclude-segments', '%s/bufferSeg.txt' % seg_dir)
node.add_opt('--output-dir', self.out_dir)
# Create output files as File objects
name_string = inj_files[0].description
seg = trig_files[0].segment
f_file = File(
self.ifos,
name_string,
seg,
extension="xml",
directory=self.out_dir,
store_file=self.retain_files,
tags=[inj_files[0].tag_str.replace("split0", "FOUND")])
m_file = File(
self.ifos,
name_string,
seg,
extension="xml",
directory=self.out_dir,
store_file=self.retain_files,
tags=[inj_files[0].tag_str.replace("split0", "MISSED")])
return node, FileList([f_file, m_file])示例3: create_node
# 需要导入模块: from pycbc.workflow.core import Node [as 别名]
# 或者: from pycbc.workflow.core.Node import add_input_list_opt [as 别名]
def create_node(self, coinc_files, tags=[]):
segs = coinc_files.get_times_covered_by_files()
seg = segments.segment(segs[0][0], segs[-1][1])
node = Node(self)
node.set_memory(5000)
node.add_input_list_opt('--coinc-files', coinc_files)
node.new_output_file_opt(seg, '.hdf', '--output-file', tags=tags)
return node示例4: create_node
# 需要导入模块: from pycbc.workflow.core import Node [as 别名]
# 或者: from pycbc.workflow.core.Node import add_input_list_opt [as 别名]
def create_node(self, trig_files=None, segment_dir=None, out_tags=[],
tags=[]):
node = Node(self)
if not trig_files:
raise ValueError("%s must be supplied with trigger files"
% self.name)
# Data options
pad_data = self.cp.get('inspiral', 'pad-data')
if pad_data is None:
raise ValueError("The option pad-data is a required option of "
"%s. Please check the ini file." % self.name)
num_trials = int(self.cp.get("trig_combiner", "num-trials"))
trig_name = self.cp.get('workflow', 'trigger-name')
if all("COHERENT_NO_INJECTIONS" in t.name for t in trig_files) and \
self.cp.has_option_tag('inspiral', 'do-short-slides',
'coherent_no_injections'):
node.add_opt('--short-slides')
node.add_opt('--grb-name', trig_name)
node.add_opt('--pad-data', pad_data)
node.add_opt('--segment-length', self.cp.get('inspiral',
'segment-duration'))
node.add_opt('--ifo-tag', self.ifos)
node.add_opt('--user-tag', 'INSPIRAL')
# Set input / output options
node.add_input_list_opt('--input-files', trig_files)
node.add_opt('--segment-dir', segment_dir)
node.add_opt('--output-dir', self.out_dir)
out_files = FileList([])
for out_tag in out_tags:
out_file = File(self.ifos, 'INSPIRAL', trig_files[0].segment,
directory=self.out_dir, extension='xml.gz',
tags=["GRB%s" % trig_name, out_tag],
store_file=self.retain_files)
out_files.append(out_file)
for trial in range(1, num_trials + 1):
out_file = File(self.ifos, 'INSPIRAL', trig_files[0].segment,
directory=self.out_dir, extension='xml.gz',
tags=["GRB%s" % trig_name, "OFFTRIAL_%d" % trial],
store_file=self.retain_files)
out_files.append(out_file)
node.add_profile('condor', 'request_cpus', self.num_threads)
return node, out_files示例5: create_node
# 需要导入模块: from pycbc.workflow.core import Node [as 别名]
# 或者: from pycbc.workflow.core.Node import add_input_list_opt [as 别名]
def create_node(self, trig_files, bank_file, stat_files, veto_file,
veto_name, template_str, pivot_ifo, fixed_ifo, tags=None):
if tags is None:
tags = []
segs = trig_files.get_times_covered_by_files()
seg = segments.segment(segs[0][0], segs[-1][1])
node = Node(self)
node.add_input_opt('--template-bank', bank_file)
node.add_input_list_opt('--trigger-files', trig_files)
if len(stat_files) > 0:
node.add_input_list_opt('--statistic-files', stat_files)
if veto_file is not None:
node.add_input_opt('--veto-files', veto_file)
node.add_opt('--segment-name', veto_name)
node.add_opt('--pivot-ifo', pivot_ifo)
node.add_opt('--fixed-ifo', fixed_ifo)
node.add_opt('--template-fraction-range', template_str)
node.new_output_file_opt(seg, '.hdf', '--output-file', tags=tags)
return node示例6: create_node
# 需要导入模块: from pycbc.workflow.core import Node [as 别名]
# 或者: from pycbc.workflow.core.Node import add_input_list_opt [as 别名]
def create_node(self, trig_files=None, segment_dir=None, analysis_seg=None,
slide_tag=None, out_tags=None, tags=None):
import Pegasus.DAX3 as dax
if out_tags is None:
out_tags = []
if tags is None:
tags = []
node = Node(self)
if not trig_files:
raise ValueError("%s must be supplied with trigger files"
% self.name)
# Data options
num_trials = int(self.cp.get("trig_combiner", "num-trials"))
trig_name = self.cp.get('workflow', 'trigger-name')
if all("COHERENT_NO_INJECTIONS" in t.name for t in trig_files) and \
self.cp.has_option_tag('inspiral', 'do-short-slides',
'coherent_no_injections'):
node.add_opt('--short-slides')
node.add_opt('--grb-name', trig_name)
node.add_opt('--trig-start-time', analysis_seg[0])
node.add_opt('--ifo-tag', self.ifos)
node.add_opt('--user-tag', 'INSPIRAL')
if tags:
node.add_opt('--job-tag', '_'.join(tags))
if slide_tag is not None:
node.add_opt('--slide-tag', slide_tag)
node.add_opt('--long-slides')
tag_start=["TIMESLIDES_GRB%s_%s" % (trig_name, slide_tag)]+tags
else:
tag_start=["GRB%s" % trig_name]+tags
# Set input / output options
if all(hasattr(t.node, "executable") for t in trig_files):
if all(t.node.executable.name == "trig_cluster"
for t in trig_files):
node.add_opt('--input-files',
" ".join([t.storage_path for t in trig_files]))
if self.cp.has_option_tag('inspiral', 'do-short-slides',
'coherent_no_injections'):
node.add_opt('--short-slides')
else:
node.add_input_list_opt('--input-files', trig_files)
else:
node.add_opt('--input-files',
" ".join([t.storage_path for t in trig_files]))
node.add_opt('--segment-dir', segment_dir)
node.add_opt('--output-dir', self.out_dir)
out_files = FileList([])
for out_tag in out_tags:
out_file = File(self.ifos, 'INSPIRAL', trig_files[0].segment,
directory=self.out_dir, extension='xml.gz',
tags=tag_start+[out_tag],
store_file=self.retain_files)
out_files.append(out_file)
#node._dax_node.uses(out_file, link=dax.Link.OUTPUT, register=False,
# transfer=False)
#node._outputs += [out_file]
#out_file.node = node
#node._add_output(out_file)
for trial in range(1, num_trials + 1):
out_file = File(self.ifos, 'INSPIRAL', trig_files[0].segment,
directory=self.out_dir, extension='xml.gz',
tags=tag_start+["OFFTRIAL_%d" % trial],
store_file=self.retain_files)
out_files.append(out_file)
#node._dax_node.uses(out_file, link=dax.Link.OUTPUT, register=False,
# transfer=False)
#node._outputs += [out_file]
#out_file.node = node
#node._add_output(out_file)
node.add_profile('condor', 'request_cpus', self.num_threads)
return node, out_files