本文整理汇总了Python中pele.utils.disconnectivity_graph.DisconnectivityGraph.show方法的典型用法代码示例。如果您正苦于以下问题：Python DisconnectivityGraph.show方法的具体用法？Python DisconnectivityGraph.show怎么用？Python DisconnectivityGraph.show使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类pele.utils.disconnectivity_graph.DisconnectivityGraph的用法示例。
在下文中一共展示了DisconnectivityGraph.show方法的2个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: make_graph
# 需要导入模块: from pele.utils.disconnectivity_graph import DisconnectivityGraph [as 别名]
# 或者: from pele.utils.disconnectivity_graph.DisconnectivityGraph import show [as 别名]
def make_graph(database):
# make a graph from the database
graph = database2graph(database)
# turn the graph into a disconnectivity graph
dg = DisconnectivityGraph(graph,
nlevels=5,
center_gmin=False,
order_by_energy=True)
dg.calculate()
print "number of minima:", dg.tree_graph.number_of_leaves()
dg.plot()
dg.show()示例2: test_color_value
# 需要导入模块: from pele.utils.disconnectivity_graph import DisconnectivityGraph [as 别名]
# 或者: from pele.utils.disconnectivity_graph.DisconnectivityGraph import show [as 别名]
def test_color_value(self):
dgraph = DisconnectivityGraph(self.tsgraph)
dgraph.calculate()
def minimum_to_value(m):
if m.energy < 5.:
return m.energy
else:
return None
dgraph.color_by_value(minimum_to_value)
dgraph.plot(linewidth=2.)
dgraph.label_minima({self.db.minima()[0]: "gmin",
self.db.minima()[1]: "2nd lowest"})
if _show:
from matplotlib import pyplot as plt
plt.title("color by value")
dgraph.show()