本文整理汇总了Python中paleomix.atomiccmd.builder.AtomicCmdBuilder.add_multiple_kwargs方法的典型用法代码示例。如果您正苦于以下问题：Python AtomicCmdBuilder.add_multiple_kwargs方法的具体用法？Python AtomicCmdBuilder.add_multiple_kwargs怎么用？Python AtomicCmdBuilder.add_multiple_kwargs使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类paleomix.atomiccmd.builder.AtomicCmdBuilder的用法示例。
在下文中一共展示了AtomicCmdBuilder.add_multiple_kwargs方法的4个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: customize
# 需要导入模块: from paleomix.atomiccmd.builder import AtomicCmdBuilder [as 别名]
# 或者: from paleomix.atomiccmd.builder.AtomicCmdBuilder import add_multiple_kwargs [as 别名]
def customize(self, config, reference, input_files, output_file, directory,
dependencies=()):
input_files = safe_coerce_to_tuple(input_files)
stats_out_fname = "Stats_out_MCMC_correct_prob.csv"
command = AtomicCmdBuilder(["mapDamage", "--rescale-only",
"-i", "%(TEMP_IN_BAM)s",
"-d", "%(TEMP_DIR)s",
"-r", "%(IN_REFERENCE)s",
"--rescale-out", "%(OUT_BAM)s"],
TEMP_IN_BAM=MultiBAMInputNode.PIPE_FILE,
IN_REFERENCE=reference,
TEMP_OUT_LOG="Runtime_log.txt",
TEMP_OUT_CSV=stats_out_fname,
OUT_BAM=output_file,
CHECK_VERSION=MAPDAMAGE_VERSION)
command.add_multiple_kwargs(input_files)
return {"command": command,
"config": config,
"input_files": input_files,
"directory": directory,
"dependencies": dependencies}示例2: test_builder__add_multiple_kwargs_multiple_times
# 需要导入模块: from paleomix.atomiccmd.builder import AtomicCmdBuilder [as 别名]
# 或者: from paleomix.atomiccmd.builder.AtomicCmdBuilder import add_multiple_kwargs [as 别名]
def test_builder__add_multiple_kwargs_multiple_times():
expected = {"IN_FILE_01": "file_a", "IN_FILE_02": "file_b"}
builder = AtomicCmdBuilder("ls")
kwargs = builder.add_multiple_kwargs(("file_a",))
assert_equal(kwargs, {"IN_FILE_01": "file_a"})
kwargs = builder.add_multiple_kwargs(("file_b",))
assert_equal(kwargs, {"IN_FILE_02": "file_b"})
assert_equal(builder.kwargs, expected)
assert_equal(builder.call, ["ls"])示例3: test_builder__add_multiple_kwargs_with_template
# 需要导入模块: from paleomix.atomiccmd.builder import AtomicCmdBuilder [as 别名]
# 或者: from paleomix.atomiccmd.builder.AtomicCmdBuilder import add_multiple_kwargs [as 别名]
def test_builder__add_multiple_kwargs_with_template():
values = ("file_a", "file_b")
expected = {"OUT_BAM_1": "file_a", "OUT_BAM_2": "file_b"}
builder = AtomicCmdBuilder("ls")
kwargs = builder.add_multiple_kwargs(values, template="OUT_BAM_%i")
assert_equal(kwargs, expected)
assert_equal(builder.kwargs, expected)
assert_equal(builder.call, ["ls"])示例4: test_builder__add_multiple_kwargs
# 需要导入模块: from paleomix.atomiccmd.builder import AtomicCmdBuilder [as 别名]
# 或者: from paleomix.atomiccmd.builder.AtomicCmdBuilder import add_multiple_kwargs [as 别名]
def test_builder__add_multiple_kwargs():
values = ("file_a", "file_b")
expected = {"IN_FILE_01": "file_a", "IN_FILE_02": "file_b"}
builder = AtomicCmdBuilder("ls")
kwargs = builder.add_multiple_kwargs(values)
assert_equal(kwargs, expected)
assert_equal(builder.kwargs, expected)
assert_equal(builder.call, ["ls"])