Python ImageI.unload方法代码示例

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
 def testUnloadCheckPtr(self):
     img = ImageI()
     assert img.isLoaded()
     assert img.getDetails()  # details are auto instantiated
     assert not img.getName()  # no other single-valued field is
     img.unload()
     assert not img.isLoaded()
     pytest.raises(omero.UnloadedEntityException, img.getDetails)

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
 def testSequences(self):
     img = ImageI()
     assert img.sizeOfAnnotationLinks() >= 0
     img.linkAnnotation(None)
     img.unload()
     try:
         assert not img.sizeOfAnnotationLinks() >= 0
         assert len(img.copyAnnotationLinks()) == 0
         assert False, "can't reach here"
     except:
         # These are true, but can't be tested
         pass

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
 def testSequences(self):
     img = ImageI()
     self.assert_( img.sizeOfAnnotationLinks() >= 0 )
     img.linkAnnotation(None)
     img.unload()
     try:
         self.assert_( not img.sizeOfAnnotationLinks() >= 0 )
         self.assert_( len(img.copyAnnotationLinks()) == 0 )
         self.fail("can't reach here")
     except:
         # These are true, but can't be tested
         pass

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def test2327(self):

        ### create two users in two groups
        client_share1, user1 = self.new_client_and_user()
        client_share2, user2 = self.new_client_and_user()

        ## login as user1
        share1 = client_share1.sf.getShareService()
        update1 = client_share1.sf.getUpdateService()

        # create image
        img = ImageI()
        img.setName(rstring('test2327'))
        img.setAcquisitionDate(rtime(0))
        img = update1.saveAndReturnObject(img)
        img.unload()

        # create share
        description = "my description"
        timeout = None
        objects = [img]
        experimenters = [user2]
        guests = []
        enabled = True
        sid = share1.createShare(description, timeout, objects, experimenters, guests, enabled)
        self.assert_(len(share1.getContents(sid)) == 1)
        # add comment by the owner
        share1.addComment(sid, 'test comment by the owner %s' % user1.id.val)

        ## login as user2
        share2 = client_share2.sf.getShareService()
        query2 = client_share2.sf.getQueryService()

        l = share2.getMemberShares(False)
        self.assertEquals(1, len(l))

        # add comment by the member
        share2.addComment(sid, 'test comment by the member %s' % (user2.id.val))

        # Don't have to activate share2

        #get comments
        # by user1
        c1 = len(share1.getComments(sid))
        self.assertEquals(2, c1)
        # by user2
        c2 = len(share2.getComments(sid))
        self.assertEquals(2, c2)

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def test1154(self):
        uuid = self.root.sf.getAdminService().getEventContext().sessionUuid

        
        ### create two users in one group
        client_share1, user1 = self.new_client_and_user()
        client_share2, user2 = self.new_client_and_user()

        ## login as user1
        share1 = client_share1.sf.getShareService()
        update1 = client_share1.sf.getUpdateService()
        
        # create image
        img = ImageI()
        img.setName(rstring('test1154-img-%s' % (uuid)))
        img.setAcquisitionDate(rtime(0))
        img = update1.saveAndReturnObject(img)
        img.unload()
        
        # create share
        description = "my description"
        timeout = None
        objects = [img]
        experimenters = [user2]
        guests = []
        enabled = True
        sid = share1.createShare(description, timeout, objects,experimenters, guests, enabled)
        
        self.assertEquals(1,len(share1.getContents(sid)))
        
        ## login as user2
        share2 = client_share2.sf.getShareService()
        query2 = client_share2.sf.getQueryService()
        
        content = share2.getContents(sid)
        self.assertEquals(1,len(share2.getContents(sid)))
        
        # get shared image when share is activated
        share2.activate(sid)

        p = omero.sys.Parameters()
        p.map = {}
        p.map["ids"] = rlist([rlong(img.id.val)])
        sql = "select im from Image im where im.id in (:ids) order by im.name"
        res = query2.findAllByQuery(sql, p)
        self.assertEquals(1,len(res))
        for e in res:
            self.assert_(e.id.val == img.id.val)

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def test1157(self):
        uuid = self.root.sf.getAdminService().getEventContext().sessionUuid
        share = self.root.sf.getShareService()
        
        ### create two users in one group
        client_share1, user1 = self.new_client_and_user()
        client_share2, user2 = self.new_client_and_user()
        
        ## login as user1 
        share1 = client_share1.sf.getShareService()
        update1 = client_share1.sf.getUpdateService()
        
        # create image
        img = ImageI()
        img.setName(rstring('test1154-img-%s' % (uuid)))
        img.setAcquisitionDate(rtime(0))
        img = update1.saveAndReturnObject(img)
        img.unload()
        
        # create share
        description = "my description"
        timeout = None
        objects = [img]
        experimenters = [user2]
        guests = []
        enabled = True
        sid = share1.createShare(description, timeout, objects,experimenters, guests, enabled)
        self.assert_(len(share1.getContents(sid)) == 1)
        # add comment by the owner
        share.addComment(sid, 'test comment by the owner %s' % (uuid))
        
        ## login as user2
        share2 = client_share2.sf.getShareService()
        query2 = client_share2.sf.getQueryService()
        
        # add comment by the member
        share2.addComment(sid, 'test comment by the member %s' % (uuid))

        # Don't have to activate share2

        #get comments
        # by user1
        c1 = len(share.getComments(sid))
        self.assertEquals(2,c1)
        # by user2
        c2 = len(share2.getComments(sid))
        self.assertEquals(2,c2)

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def test2327(self):
        # create two users in two groups
        client_share1, user1 = self.new_client_and_user()
        client_share2, user2 = self.new_client_and_user()

        # login as user1
        share1 = client_share1.sf.getShareService()
        update1 = client_share1.sf.getUpdateService()

        # create image
        img = ImageI()
        img.setName(rstring("test2327"))
        img.setAcquisitionDate(rtime(0))
        img = update1.saveAndReturnObject(img)
        img.unload()

        # create share
        description = "my description"
        timeout = None
        objects = [img]
        experimenters = [user2]
        guests = []
        enabled = True
        sid = share1.createShare(description, timeout, objects, experimenters, guests, enabled)
        assert len(share1.getContents(sid)) == 1
        # add comment by the owner
        share1.addComment(sid, "test comment by the owner %s" % user1.id.val)

        # login as user2
        share2 = client_share2.sf.getShareService()
        l = share2.getMemberShares(False)
        assert 1 == len(l)

        # add comment by the member
        share2.addComment(sid, "test comment by the member %s" % user2.id.val)

        # get comments
        # by user1
        c1 = len(share1.getComments(sid))
        assert 2 == c1
        # by user2
        c2 = len(share2.getComments(sid))
        assert 2 == c2

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def testAccessors(self):
        name = rstring("name")
        img = ImageI()
        assert not img.getName()
        img.setName(name)
        assert img.getName()
        name = img.getName()
        assert name.val == "name"
        assert name == name

        img.setName(rstring("name2"))
        assert img.getName().val == "name2"
        assert img.getName()

        img.unload()
        try:
            assert not img.getName()
            assert False, "should fail"
        except:
            # Is true, but cannot test
            pass

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def testAccessors(self):
        name = rstring("name")
        img = ImageI()
        self.assert_( not img.getName() )
        img.setName( name )
        self.assert_( img.getName() )
        name = img.getName()
        self.assert_( name.val == "name" )
        self.assert_( name == name )

        img.setName(rstring("name2"))
        self.assert_( img.getName().val == "name2" )
        self.assert_( img.getName() )

        img.unload()
        try:
            self.assert_( not img.getName() )
            self.fail("should fail")
        except:
            # Is true, but cannot test
            pass

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def test1163(self):
        uuid = self.uuid()
        new_gr1 = self.new_group(perms="rw----")
        client_share1, new_exp_obj = self.new_client_and_user(new_gr1)
        update1 = client_share1.sf.getUpdateService()
        search1 = client_share1.sf.createSearchService()

        # create image and index
        img = ImageI()
        img.setName(rstring('test1154-img-%s' % (uuid)))
        img.setAcquisitionDate(rtime(0))
        img = update1.saveAndReturnObject(img)
        img.unload()
        self.index(img)

        # search
        search1.onlyType('Image')
        search1.addOrderByAsc("name")
        search1.byFullText("test*")
        assert search1.hasNext()
        res = search1.results()
        assert 1 ==  len(res)

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
 def test8118(self):
     uuid = self.root.sf.getAdminService().getEventContext().sessionUuid
     share_serv = self.root.sf.getShareService()
     update_serv = self.root.sf.getUpdateService()
     
     # create user
     user1 = self.new_user()
     
     # create image
     img = ImageI()
     img.setName(rstring('test8118-img-%s' % (uuid)))
     img.setAcquisitionDate(rtime(0))
     img = update_serv.saveAndReturnObject(img)
     img.unload()
     
     # create share
     description = "my description"
     timeout = None
     objects = [img]
     experimenters = [user1]
     guests = []
     enabled = True
     sid = share_serv.createShare(description, timeout, objects,experimenters, guests, enabled)
     suuid = share_serv.getShare(sid).uuid
     
     self.assertEquals(1,len(share_serv.getContents(sid)))
     
     # join share
     user1_client = omero.client()
     try:
         user1_client.createSession(suuid,suuid)
         user1_share = user1_client.sf.getShareService()
         user1_share.activate(sid)
         self.assertEquals(1, len(user1_share.getContents(sid)))
     finally:
         user1_client.__del__()

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def test1071(self):
        uuid = self.root.sf.getAdminService().getEventContext().sessionUuid
        pojos = self.root.sf.getContainerService()
        query = self.root.sf.getQueryService()
        update = self.root.sf.getUpdateService()

        #projects
        pr1 = ProjectI()
        pr1.setName(rstring('test1071-pr1-%s' % (uuid)))
        pr1 = update.saveAndReturnObject(pr1)
        pr1.unload()

        pr2 = ProjectI()
        pr2.setName(rstring('test1071-pr2-%s' % (uuid)))
        pr2 = update.saveAndReturnObject(pr2)
        pr2.unload()

        #datasets
        ds1 = DatasetI()
        ds1.setName(rstring('test1071-ds1-%s' % (uuid)))
        ds1 = update.saveAndReturnObject(ds1)
        ds1.unload()

        ds2 = DatasetI()
        ds2.setName(rstring('test1071-ds2-%s' % (uuid)))
        ds2 = update.saveAndReturnObject(ds2)
        ds2.unload()

        ds3 = DatasetI()
        ds3.setName(rstring('test1071-ds3-%s' % (uuid)))
        ds3 = update.saveAndReturnObject(ds3)
        ds3.unload()

        #images
        im2 = ImageI()
        im2.setName(rstring('test1071-im2-%s' % (uuid)))
        im2.acquisitionDate = rtime(0)
        im2 = update.saveAndReturnObject(im2)
        im2.unload()

        #links
        #
        # im2 -> ds3
        #    +-> ds2 --> pr2
        #    |       \
        #    \-> ds1 --> pr1
        #
        pdl1 = ProjectDatasetLinkI()
        pdl1.setParent(pr1)
        pdl1.setChild(ds1)
        update.saveObject(pdl1)

        pdl2 = ProjectDatasetLinkI()
        pdl2.setParent(pr1)
        pdl2.setChild(ds2)
        update.saveObject(pdl2)

        pdl3 = ProjectDatasetLinkI()
        pdl3.setParent(pr2)
        pdl3.setChild(ds2)
        update.saveObject(pdl3)

        dil4 = DatasetImageLinkI()
        dil4.setParent(ds1)
        dil4.setChild(im2)
        update.saveObject(dil4)

        dil5 = DatasetImageLinkI()
        dil5.setParent(ds2)
        dil5.setChild(im2)
        update.saveObject(dil5)

        dil6 = DatasetImageLinkI()
        dil6.setParent(ds3)
        dil6.setChild(im2)
        update.saveObject(dil6)

        #test:
        hier = pojos.findContainerHierarchies("Project", [long(im2.id.val)], None)

        assert 3 ==  len(hier), "len of hier != 3: %s" % [type(x) for x in hier]
        for c in hier:
            if c.id.val == pr1.id.val and isinstance(c, ProjectI):
                assert c.sizeOfDatasetLinks() == 2, "length 2 != " + str(c.sizeOfDatasetLinks())
                for pdl in c.copyDatasetLinks():
                    assert pdl.child.sizeOfImageLinks() == 1
                    for dil in pdl.child.copyImageLinks():
                        assert dil.child.id.val == im2.id.val
            elif c.id.val == pr2.id.val and isinstance(c, ProjectI):
                assert  c.sizeOfDatasetLinks() == 1
            elif c.id.val == ds3.id.val and isinstance(c, DatasetI):
                assert  c.sizeOfImageLinks() == 1

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def test1071_1(self):
        admin = self.root.sf.getAdminService()

        common_group = self.new_group(perms="rwrw--")
        c1 = self.new_client(common_group)
        c2 = self.new_client(common_group)

        c1_pojos = c1.sf.getContainerService()
        c1_query = c1.sf.getQueryService()
        c1_update = c1.sf.getUpdateService()
        c1_uuid = c1.sf.getAdminService().getEventContext().sessionUuid

        c2_pojos = c2.sf.getContainerService()
        c2_query = c2.sf.getQueryService()
        c2_update = c2.sf.getUpdateService()
        c2_uuid = c2.sf.getAdminService().getEventContext().sessionUuid

        #projects
        pr1 = ProjectI()
        pr1.setName(rstring('test1071-pr1-%s' % (c1_uuid)))
        pr1 = c1_update.saveAndReturnObject(pr1)
        pr1.unload()

        pr2 = ProjectI()
        pr2.setName(rstring('test1071-pr2-%s' % (c2_uuid)))
        pr2 = c2_update.saveAndReturnObject(pr2)
        pr2.unload()

        #datasets
        ds1 = DatasetI()
        ds1.setName(rstring('test1071-ds1-%s' % (c1_uuid)))
        ds1 = c1_update.saveAndReturnObject(ds1)
        ds1.unload()

        ds2 = DatasetI()
        ds2.setName(rstring('test1071-ds2-%s' % (c2_uuid)))
        ds2 = c2_update.saveAndReturnObject(ds2)
        ds2.unload()

        #images
        im2 = ImageI()
        im2.setName(rstring('test1071-im2-%s' % (c2_uuid)))
        im2.acquisitionDate = rtime(0)
        im2 = c2_update.saveAndReturnObject(im2)
        im2.unload()

        #links
        # im2 owned by u2
        #
        # im2   -> ds2 --> pr2 (owned by u2)
        #      |
        #      \-> ds1 --> pr1 (owned by u1)
        #
        pdl1 = ProjectDatasetLinkI()
        pdl1.setParent(pr1)
        pdl1.setChild(ds1)
        c1_update.saveObject(pdl1)

        pdl2 = ProjectDatasetLinkI()
        pdl2.setParent(pr2)
        pdl2.setChild(ds2)
        c2_update.saveObject(pdl2)

        dil2 = DatasetImageLinkI()
        dil2.setParent(ds2)
        dil2.setChild(im2)
        c2_update.saveObject(dil2)

        dil1 = DatasetImageLinkI()
        dil1.setParent(ds1)
        dil1.setChild(im2)
        c1_update.saveObject(dil1)

        #test:
        hier = c2_pojos.findContainerHierarchies("Project", [long(im2.id.val)], None)

        assert 2 ==  len(hier), "size of hier != 2: %s" % [type(x) for x in hier]
        for c in hier:
            if c.id.val == pr1.id.val and isinstance(c, ProjectI):
                assert 1 ==  c.sizeOfDatasetLinks()
                for pdl in c.copyDatasetLinks():
                    assert 1 ==  pdl.child.sizeOfImageLinks()
                    for dil in pdl.child.copyImageLinks():
                        assert dil.child.id.val == im2.id.val
            elif c.id.val == pr2.id.val and isinstance(c, ProjectI):
                assert 1 ==  c.sizeOfDatasetLinks()
            elif c.id.val == ds3.id.val and isinstance(c, DatasetI):
                assert 1 ==  c.sizeOfImageLinks()

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
 def testVirtual(self):
     img = ImageI()
     imgI = ImageI()
     img.unload()
     imgI.unload()

# 需要导入模块: from omero_model_ImageI import ImageI [as 别名]
# 或者: from omero_model_ImageI.ImageI import unload [as 别名]
    def test1172(self):
        uuid = self.root.sf.getAdminService().getEventContext().sessionUuid
        share = self.root.sf.getShareService()
        query = self.root.sf.getQueryService()
        update = self.root.sf.getUpdateService()
        
        ### create user
        client_share1, user1 = self.new_client_and_user()
        
        #create dataset with image
        #dataset with image
        ds = omero.model.DatasetI()
        ds.setName(rstring("dataset-%s" % (uuid)))
        ds = update.saveAndReturnObject(ds)
        ds.unload()
        
        # create image
        img = ImageI()
        img.setName(rstring('test-img in dataset-%s' % (uuid)))
        img.setAcquisitionDate(rtime(0))
        img = update.saveAndReturnObject(img)
        img.unload()
        
        dil = DatasetImageLinkI()
        dil.setParent(ds)
        dil.setChild(img)
        dil = update.saveAndReturnObject(dil)
        dil.unload()
        
        # create share by root
        items = list()
        ms = list()
        
        p = omero.sys.Parameters()
        p.map = {}
        p.map["oid"] = ds.id
        sql = "select ds from Dataset ds join fetch ds.details.owner join fetch ds.details.group " \
              "left outer join fetch ds.imageLinks dil left outer join fetch dil.child i " \
              "where ds.id=:oid"
        items.extend(query.findAllByQuery(sql, p))
        self.assertEquals(1, len(items))
        
        #members
        p.map["eid"] = rlong(user1.id.val)
        sql = "select e from Experimenter e where e.id =:eid order by e.omeName"
        ms = query.findAllByQuery(sql, p)
        sid = share.createShare(("test-share-%s" % uuid), rtime(long(time.time()*1000 + 86400)) , items, ms, [], True)
        
        # USER RETRIEVAL
        ## login as user1
        share1 = client_share1.sf.getShareService()
        query1 = client_share1.sf.getQueryService()
        cntar1 = client_share1.sf.getContainerService()
        
        content = share1.getContents(sid)
        # Content now contains just the dataset with nothing loaded
        self.assertEquals(1, len(content))

        # get shared dataset and image when share is activated
        share1.activate(sid)

        #retrieve dataset
        p = omero.sys.Parameters()
        p.map = {}
        p.map["ids"] = rlist([ds.id])
        sql = "select ds from Dataset ds join fetch ds.details.owner join fetch ds.details.group " \
              "left outer join fetch ds.imageLinks dil left outer join fetch dil.child i " \
              "where ds.id in (:ids) order by ds.name"
        try:
            res1 = query1.findAllByQuery(sql, p)
            self.fail("This should throw an exception")
        except:
            pass

        #
        # Now we add all the other elements to the share to prevent
        # the security violation
        #
        # Not working imgs = cntar.getImages("Dataset",[ds.id.val], None)
        img = query.findByQuery("select i from Image i join fetch i.datasetLinks dil join dil.parent d where d.id = %s " % ds.id.val, None)
        self.assert_(img)
        share.addObject(sid, img)
        share.addObjects(sid, img.copyDatasetLinks())
        self.assertEquals(3, len(share.getContents(sid)))

        #
        # And try again to load them
        #
        share1.activate(sid)
        res1 = query1.findAllByQuery(sql, p)
        self.assert_(len(res1) == 1)
        for e in res1:
            self.assert_(e.id.val == ds.id.val)

        # retrieve only image
        p = omero.sys.Parameters()
        p.map = {}
        p.map["oid"] = rlong(img.id)
        sql = "select im from Image im " \
              "where im.id=:oid order by im.name"
#.........这里部分代码省略.........