本文整理汇总了Python中galaxy.tools.DefaultToolState.encode方法的典型用法代码示例。如果您正苦于以下问题：Python DefaultToolState.encode方法的具体用法？Python DefaultToolState.encode怎么用？Python DefaultToolState.encode使用的例子？那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类galaxy.tools.DefaultToolState的用法示例。
在下文中一共展示了DefaultToolState.encode方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: WorkflowModule
# 需要导入模块: from galaxy.tools import DefaultToolState [as 别名]
# 或者: from galaxy.tools.DefaultToolState import encode [as 别名]
class WorkflowModule(object):
def __init__(self, trans, content_id=None, **kwds):
self.trans = trans
self.content_id = content_id
self.state = DefaultToolState()
# ---- Creating modules from various representations ---------------------
@classmethod
def from_dict(Class, trans, d, **kwds):
module = Class(trans, **kwds)
module.recover_state(d.get("tool_state"))
module.label = d.get("label")
return module
@classmethod
def from_workflow_step(Class, trans, step, **kwds):
module = Class(trans, **kwds)
module.recover_state(step.tool_inputs)
module.label = step.label
return module
# ---- Saving in various forms ------------------------------------------
def save_to_step(self, step):
step.type = self.type
step.tool_inputs = self.get_state()
# ---- General attributes -----------------------------------------------
def get_type(self):
return self.type
def get_name(self):
return self.name
def get_version(self):
return None
def get_content_id(self):
""" If this component has an identifier external to the step (such
as a tool or another workflow) return the identifier for that content.
"""
return None
def get_tooltip(self, static_path=''):
return None
# ---- Configuration time -----------------------------------------------
def get_state(self, nested=True):
""" Return a serializable representation of the persistable state of
the step.
"""
inputs = self.get_inputs()
if inputs:
return self.state.encode(Bunch(inputs=inputs), self.trans.app, nested=nested)
else:
return self.state.inputs
def recover_state(self, state, **kwds):
""" Recover state `dict` from simple dictionary describing configuration
state (potentially from persisted step state).
Sub-classes should supply a `default_state` method which contains the
initial state `dict` with key, value pairs for all available attributes.
"""
self.state = DefaultToolState()
inputs = self.get_inputs()
if inputs:
self.state.decode(state, Bunch(inputs=inputs), self.trans.app)
else:
self.state.inputs = safe_loads(state) or {}
def get_errors(self):
""" This returns a step related error message as string or None """
return None
def get_inputs(self):
""" This returns inputs displayed in the workflow editor """
return {}
def get_data_inputs(self):
""" Get configure time data input descriptions. """
return []
def get_data_outputs(self):
return []
def get_post_job_actions(self, incoming):
return []
def check_and_update_state(self):
"""
If the state is not in sync with the current implementation of the
module, try to update. Returns a list of messages to be displayed
"""
pass
#.........这里部分代码省略.........