本文整理汇总了Python中base.populators.DatasetPopulator._get方法的典型用法代码示例。如果您正苦于以下问题：Python DatasetPopulator._get方法的具体用法？Python DatasetPopulator._get怎么用？Python DatasetPopulator._get使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类base.populators.DatasetPopulator的用法示例。
在下文中一共展示了DatasetPopulator._get方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: ScriptsIntegrationTestCase
# 需要导入模块: from base.populators import DatasetPopulator [as 别名]
# 或者: from base.populators.DatasetPopulator import _get [as 别名]
class ScriptsIntegrationTestCase(integration_util.IntegrationTestCase):
def setUp(self):
super(ScriptsIntegrationTestCase, self).setUp()
self.dataset_populator = DatasetPopulator(self.galaxy_interactor)
self.config_dir = tempfile.mkdtemp()
@classmethod
def handle_galaxy_config_kwds(cls, config):
cls._raw_config = config
def test_helper(self):
script = "helper.py"
self._scripts_check_argparse_help(script)
history_id = self.dataset_populator.new_history()
dataset = self.dataset_populator.new_dataset(history_id, wait=True)
dataset_id = dataset["id"]
config_file = self.write_config_file()
output = self._scripts_check_output(script, ["-c", config_file, "--decode-id", dataset_id])
assert "Decoded " in output
def test_cleanup(self):
script = "cleanup_datasets/cleanup_datasets.py"
self._scripts_check_argparse_help(script)
history_id = self.dataset_populator.new_history()
delete_response = self.dataset_populator._delete("histories/%s" % history_id)
assert delete_response.status_code == 200
assert delete_response.json()["purged"] is False
config_file = self.write_config_file()
output = self._scripts_check_output(script, ["-c", config_file, "--days", "0", "--purge_histories"])
print(output)
history_response = self.dataset_populator._get("histories/%s" % history_id)
assert history_response.status_code == 200
assert history_response.json()["purged"] is True, history_response.json()
def test_pgcleanup(self):
self._skip_if_not_postgres()
script = "cleanup_datasets/pgcleanup.py"
self._scripts_check_argparse_help(script)
history_id = self.dataset_populator.new_history()
delete_response = self.dataset_populator._delete("histories/%s" % history_id)
assert delete_response.status_code == 200
assert delete_response.json()["purged"] is False
config_file = self.write_config_file()
output = self._scripts_check_output(script, ["-c", config_file, "--older-than", "0", "--sequence", "purge_deleted_histories"])
print(output)
history_response = self.dataset_populator._get("histories/%s" % history_id)
assert history_response.status_code == 200
assert history_response.json()["purged"] is True, history_response.json()
def test_set_user_disk_usage(self):
script = "set_user_disk_usage.py"
self._scripts_check_argparse_help(script)
history_id = self.dataset_populator.new_history()
self.dataset_populator.new_dataset(history_id, wait=True)
config_file = self.write_config_file()
output = self._scripts_check_output(script, ["-c", config_file])
# verify the script runs to completion without crashing
assert "100% complete" in output, output
def test_set_dataset_sizes(self):
script = "set_dataset_sizes.py"
self._scripts_check_argparse_help(script)
# TODO: change the size of the dataset and verify this works.
history_id = self.dataset_populator.new_history()
self.dataset_populator.new_dataset(history_id, wait=True)
config_file = self.write_config_file()
output = self._scripts_check_output(script, ["-c", config_file])
# verify the script runs to completion without crashing
assert "Completed 100%" in output, output
def test_populate_uuid(self):
script = "cleanup_datasets/populate_uuid.py"
self._scripts_check_argparse_help(script)
history_id = self.dataset_populator.new_history()
self.dataset_populator.new_dataset(history_id, wait=True)
config_file = self.write_config_file()
output = self._scripts_check_output(script, ["-c", config_file])
assert "Complete" in output
@integration_util.skip_if_jenkins
def test_grt_export(self):
script = "grt/export.py"
self._scripts_check_argparse_help(script)
history_id = self.dataset_populator.new_history()
self.dataset_populator.new_dataset(history_id, wait=True)
config_file = self.write_config_file()
grt_config_file = os.path.join(self.config_dir, "grt.yml")
with open(grt_config_file, "w") as f:
yaml.dump({"grt": {"share_toolbox": True}, "sanitization": {"tools": []}, "tool_params": {}}, f)
self._scripts_check_output(script, ["-c", config_file, "-g", grt_config_file, "-r", self.config_dir])
report_files = os.listdir(self.config_dir)
#.........这里部分代码省略.........