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Python Vasp.set方法代码示例

本文整理汇总了Python中ase.calculators.vasp.Vasp.set方法的典型用法代码示例。如果您正苦于以下问题:Python Vasp.set方法的具体用法?Python Vasp.set怎么用?Python Vasp.set使用的例子?那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在ase.calculators.vasp.Vasp的用法示例。


在下文中一共展示了Vasp.set方法的2个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于系统推荐出更棒的Python代码示例。

示例1: neb_initialize

# 需要导入模块: from ase.calculators.vasp import Vasp [as 别名]
# 或者: from ase.calculators.vasp.Vasp import set [as 别名]
def neb_initialize(neb_images, kwargs):
    """Creates necessary files for an NEB calculation"""
    for a in neb_images:
        log.debug(a.numbers)

    calc = Vasp()

    # how to get the initial and final energies?
    initial = neb_images[0]
    log.debug(initial.numbers)
    calc0 = initial.get_calculator()

    log.debug('Calculator cwd = %s', calc0.cwd)
    log.debug('Calculator vaspdir = %s', calc0.vaspdir)

    # we have to store the initial and final energies because
    # otherwise they will not be available when reread the
    # directory in another script, e.g. jaspsum. The only other
    # option is to make the initial and final directories full
    # vasp calculations.
    CWD = os.getcwd()
    try:

        os.chdir(os.path.join(calc0.cwd, calc0.vaspdir))
        e0 = calc0.read_energy()[1]
        calc.neb_initial_energy = e0
    finally:
        os.chdir(CWD)

    final = neb_images[-1]
    log.debug(final.numbers)
    calc_final = final.get_calculator()
    log.debug(calc_final.cwd)
    log.debug(calc_final.vaspdir)
    try:
        os.chdir(os.path.join(calc_final.cwd, calc_final.vaspdir))
        efinal = calc_final.read_energy()[1]
        calc.neb_final_energy = efinal
    finally:
        os.chdir(CWD)

    # make a Vasp object and set inputs to initial image
    calc.int_params.update(calc0.int_params)
    calc.float_params.update(calc0.float_params)
    calc.exp_params.update(calc0.exp_params)
    calc.string_params.update(calc0.string_params)
    calc.bool_params.update(calc0.bool_params)
    calc.list_params.update(calc0.list_params)
    calc.dict_params.update(calc0.dict_params)
    calc.input_params.update(calc0.input_params)

    calc.neb_kwargs = kwargs
    # this is the vasp images tag. it does not include the endpoints
    IMAGES = len(neb_images) - 2
    calc.set(images=IMAGES)
    calc.neb_images = neb_images
    calc.neb_nimages = IMAGES
    calc.neb = True
    return calc
开发者ID:AkshayTharval,项目名称:jasp,代码行数:61,代码来源:jasp_neb.py

示例2: set

# 需要导入模块: from ase.calculators.vasp import Vasp [as 别名]
# 或者: from ase.calculators.vasp.Vasp import set [as 别名]
    def set(self,**kwargs):
        if 'block' in kwargs :
            self.block=kwargs['block']
            del kwargs['block']
        else :
            self.block=True

        if 'ncl' in kwargs :
            self.ncl=kwargs['ncl']
            del kwargs['ncl']
        else :
            self.ncl=False
        Vasp.set(self, **kwargs)
开发者ID:digideskio,项目名称:Elastic,代码行数:15,代码来源:parcalc.py


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