Python EVtwin.commit_parameters方法代码示例

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def xtest9(self):
        print "Test for changing the stellar structure model (not yet implemented)"
        star = Particles(1)
        star.mass = 1.0 | units.MSun
        instance = EVtwin()
        instance.initialize_code()
        instance.commit_parameters()
        instance.particles.add_particles(star)
        instance.commit_particles()
        instance.evolve_model()

        density_profile = instance.particles[0].get_density_profile()

        self.assertRaises(AmuseException, instance.particles[0].set_density_profile, density_profile[2:],
            expected_message = "The length of the supplied vector (197) does not match the number of "
            "mesh zones of the star (199).")

        mass_factor = 1.1
        instance.particles[0].set_density_profile(mass_factor*density_profile)
        self.assertAlmostRelativeEqual(instance.particles[0].get_density_profile(), density_profile*mass_factor, places=10)
        instance.particles.mass *= mass_factor
        instance.evolve_model()

        outer_radius = instance.particles[0].get_radius_profile()
        inner_radius = outer_radius[:-1]
        inner_radius.prepend(0|units.m)
        delta_radius_cubed = (outer_radius**3 - inner_radius**3)
        integrated_mass = (4./3.*pi*delta_radius_cubed*instance.particles[0].get_density_profile()).sum()
        self.assertAlmostRelativeEqual(integrated_mass, star.mass*mass_factor, places = 3)
        instance.stop()
        del instance

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def test5(self):
        print "Testing adding and removing particles from stellar evolution code..."

        particles = Particles(3)
        particles.mass = 0.3 | units.MSun

        instance = EVtwin()#redirection="none")
        instance.initialize_code()
        instance.parameters.verbosity = True
        instance.commit_parameters()
        stars = instance.particles
        self.assertEquals(len(stars), 0) # before creation
        stars.add_particles(particles[:-1])
        instance.commit_particles()
        instance.evolve_model(1.0 | units.Myr)
        self.assertEquals(len(stars), 2) # before remove
        self.assertAlmostEqual(stars.age, 1.0 | units.Myr)

        stars.remove_particle(particles[0])
        self.assertEquals(len(stars), 1)
        self.assertEquals(instance.get_number_of_particles(), 1)
        instance.evolve_model(2.0 | units.Myr)
        self.assertAlmostEqual(stars[0].age, 2.0 | units.Myr)

        stars.add_particles(particles[::2])
        self.assertEquals(len(stars), 3) # it's back...
        self.assertAlmostEqual(stars[0].age, 2.0 | units.Myr)
        self.assertAlmostEqual(stars[1].age, 0.0 | units.Myr)
        self.assertAlmostEqual(stars[2].age, 0.0 | units.Myr) # ... and rejuvenated.

        instance.evolve_model(3.0 | units.Myr) # The young stars keep their age offset from the old star
        self.assertAlmostEqual(stars.age, [3.0, 1.0, 1.0] | units.Myr)
        instance.evolve_model(4.0 | units.Myr)
        self.assertAlmostEqual(stars.age, [4.0, 2.0, 2.0] | units.Myr)
        instance.stop()

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def slowtest8(self):
        print "Test for obtaining the stellar composition structure - evolved star"
        stars = Particles(1)
        stars.mass = 1.0 | units.MSun
        instance = EVtwin()
        instance.initialize_code()
        instance.commit_parameters()
        instance.particles.add_particles(stars)
        instance.commit_particles()
        instance.evolve_model(11.7 | units.Gyr)
        self.assertTrue(instance.particles[0].age >= 11.7 | units.Gyr)
        print instance.particles[0].stellar_type
#~        self.assertTrue(str(instance.particles[0].stellar_type) == "First Giant Branch")
        number_of_zones   = instance.particles.get_number_of_zones()[0]
        number_of_species = instance.particles.get_number_of_species()[0]
        composition       = instance.particles[0].get_chemical_abundance_profiles()
        species_names     = instance.particles[0].get_names_of_species()
        self.assertEquals(number_of_zones,    199)
        self.assertEquals(number_of_species,    9)
        self.assertEquals(len(species_names),  number_of_species)
        self.assertEquals(len(composition),    number_of_species)
        self.assertEquals(len(composition[0]), number_of_zones)
        self.assertEquals(species_names, ['h1', 'he4', 'c12', 'n14', 'o16', 'ne20', 'mg24', 'si28', 'fe56'])
        self.assertAlmostRelativeEquals(composition[0, -1],        0.7 | units.none, 1)
        self.assertAlmostRelativeEquals(composition[1, -1],        0.3 - instance.parameters.metallicity, 1)
        self.assertAlmostRelativeEquals(composition[2:,-1].sum(),  instance.parameters.metallicity, 1)
        self.assertAlmostEquals(composition.sum(axis=0), [1.0]*number_of_zones | units.none)
        self.assertAlmostEquals(composition[0, 0],        0.00 | units.none)
        self.assertAlmostEquals(composition[1, 0],        1.00 - instance.parameters.metallicity, 3)
        self.assertAlmostEquals(composition[2:,0].sum(),  instance.parameters.metallicity, 3)
        instance.stop()

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
 def test6(self):
     print "Test for obtaining the stellar structure model"
     stars = Particles(2)
     stars.mass = [1.0, 10.0] | units.MSun
     instance = EVtwin()
     instance.initialize_code()
     instance.commit_parameters()
     instance.particles.add_particles(stars)
     instance.commit_particles()
     self.assertEquals(instance.particles.get_number_of_zones(), [199, 199])
     self.assertEquals(len(instance.particles[0].get_radius_profile()), 199)
     self.assertRaises(AmuseException, instance.particles.get_radius_profile,
         expected_message = "Querying radius profiles of more than one particle at a time is not supported.")
     self.assertEquals(len(instance.particles[1].get_density_profile()), 199)
     self.assertIsOfOrder(instance.particles[0].get_radius_profile()[-1],          1.0 | units.RSun)
     self.assertIsOfOrder(instance.particles[0].get_temperature_profile()[0],  1.0e7 | units.K)
     self.assertIsOfOrder(instance.particles[0].get_temperature_profile()[-1],  5.0e3 | units.K)
     radius1 = instance.particles[0].get_radius_profile()
     radius2 = radius1[:-1]
     radius2.prepend(0|units.m)
     delta_radius_cubed = (radius1**3 - radius2**3)
     total_mass = (4./3. * pi * instance.particles[0].get_density_profile() * delta_radius_cubed).sum()
     self.assertAlmostRelativeEqual(total_mass, stars[0].mass, places = 1)
     self.assertAlmostEquals(instance.particles[0].get_mu_profile()[:100], [0.62]*100 | units.amu, places=1)
     instance.stop()

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def test2(self):
        print "Testing basic operations"
        instance = EVtwin()
        instance.initialize_code()
        instance.commit_parameters()

        stars = Particles(1)
        stars.mass = 10 | units.MSun

        instance.particles.add_particles(stars)
        instance.commit_particles()

        self.assertEquals(instance.particles.mass, 10 | units.MSun)
        self.assertAlmostEquals(instance.particles.luminosity, 5695.19757302 | units.LSun, 6)
        self.assertAlmostEquals(instance.particles.radius, 4.07378590 | units.RSun, 6)
        instance.stop()

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def test4(self):
        print "Testing max age stop condition..."
        # masses = [.5, 1.0, 1.5] | units.MSun # Test with fewer particles for speed-up.
        masses = [0.5] | units.MSun
        max_age = 9.0 | units.Myr

        number_of_stars = len(masses)
        stars = Particles(number_of_stars)
        for i, star in enumerate(stars):
            star.mass = masses[i]
            star.radius = 0.0 | units.RSun

        #       Initialize stellar evolution code
        instance = EVtwin()
        instance.initialize_code()
        instance.parameters.verbosity = True
        if instance.parameters.maximum_number_of_stars < number_of_stars:
            instance.parameters.maximum_number_of_stars = number_of_stars
        self.assertEqual(instance.parameters.max_age_stop_condition, 2e6 | units.Myr)
        instance.parameters.max_age_stop_condition = max_age
        self.assertEqual(instance.parameters.max_age_stop_condition, max_age)
        instance.commit_parameters()
        instance.particles.add_particles(stars)
        #       Let the code perform initialization actions after all particles have been created.
        instance.commit_particles()

        from_code_to_model = instance.particles.new_channel_to(stars)

        instance.evolve_model(end_time=8.0 | units.Myr)
        from_code_to_model.copy()

        for i in range(number_of_stars):
            print stars[i].age.as_quantity_in(units.Myr)
            self.assertTrue(stars[i].age >= 8.0 | units.Myr)
            self.assertTrue(stars[i].age <= max_age)
            self.assertTrue(stars[i].mass <= masses[i])
            self.assertTrue(stars[i].time_step <= max_age)

        self.assertRaises(
            AmuseException,
            instance.evolve_model,
            end_time=2 * max_age,
            expected_message="Error when calling 'evolve_for' of a 'EVtwin', errorcode "
            "is 5, error is 'Age greater than maximum age limit.'",
        )

        instance.stop()

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def xtest10(self):
        print "Test for changing the stellar composition (not yet implemented)"
        star = Particles(1)
        star.mass = 1.0 | units.MSun
        instance = EVtwin()
        instance.initialize_code()
        instance.commit_parameters()
        instance.particles.add_particles(star)
        instance.commit_particles()
        instance.evolve_model()

        composition = instance.particles[0].get_chemical_abundance_profiles()
        h1_profile = composition[0] * 1
        he4_profile = composition[1] * 1
        k_surface = -1  # index to the outer mesh cell (surface)

        self.assertAlmostEquals(composition[0, k_surface], 0.7 | units.none, 4)
        self.assertAlmostEquals(composition[1, k_surface], (0.3 | units.none) - instance.parameters.metallicity, 4)
        self.assertAlmostEquals(composition[2:, k_surface].sum(), instance.parameters.metallicity, 4)

        composition[0] = he4_profile
        composition[1] = h1_profile
        instance.particles[0].set_chemical_abundance_profiles(composition)
        instance.evolve_model()

        composition = instance.particles[0].get_chemical_abundance_profiles()
        self.assertAlmostEquals(composition[0, k_surface], (0.3 | units.none) - instance.parameters.metallicity, 4)
        self.assertAlmostEquals(composition[1, k_surface], 0.7 | units.none, 4)
        self.assertAlmostEquals(composition[2:, k_surface].sum(), instance.parameters.metallicity, 4)
        self.assertAlmostEquals(composition.sum(axis=0), 1.0 | units.none)

        self.assertRaises(
            AmuseException,
            instance.particles[0].set_chemical_abundance_profiles,
            composition[:7],
            expected_message="The length of the supplied vector (7) does not match the number of "
            "chemical species of the star (8).",
        )
        instance.stop()
        del instance

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def test3(self):
        print "Testing sun recreation"
        instance = EVtwin()
        instance.initialize_code()
        instance.commit_parameters()

        stars = Particles(1)
        stars.mass = 1 | units.MSun

        instance.particles.add_particles(stars)
        instance.commit_particles()

        self.assertEquals(instance.particles.mass, 1 | units.MSun)
        self.assertAlmostEquals(instance.particles.luminosity, 0.7098065 | units.LSun, 6)
        self.assertAlmostEquals(instance.particles.radius, 0.8892833 | units.RSun, 6)

        instance.evolve_model(4.8|units.Gyr)

        self.assertAlmostEquals(instance.particles.mass, 0.999921335 | units.MSun, 6)
        self.assertAlmostEquals(instance.particles.luminosity, 1.04448714 | units.LSun, 6)
        self.assertAlmostEquals(instance.particles.radius, 1.02061451 | units.RSun, 6)

        instance.stop()

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def test14(self):
        print "Testing EVtwin states"
        stars = Particles(2)
        stars.mass = 1.0 | units.MSun
        instance = EVtwin()

        print "First do everything manually:",
        self.assertEquals(instance.get_name_of_current_state(), 'UNINITIALIZED')
        instance.initialize_code()
        self.assertEquals(instance.get_name_of_current_state(), 'INITIALIZED')
        instance.commit_parameters()
        self.assertEquals(instance.get_name_of_current_state(), 'EDIT')
        instance.particles.add_particle(stars[0])
        instance.commit_particles()
        self.assertEquals(instance.get_name_of_current_state(), 'RUN')
        instance.cleanup_code()
        self.assertEquals(instance.get_name_of_current_state(), 'END')
        instance.stop()
        print "ok"

        print "initialize_code(), commit_parameters(), (re)commit_particles(), " \
            "and cleanup_code() should be called automatically:",
        instance = EVtwin()
        self.assertEquals(instance.get_name_of_current_state(), 'UNINITIALIZED')
        instance.parameters.RGB_wind_setting = -0.5
        self.assertEquals(instance.get_name_of_current_state(), 'INITIALIZED')
        instance.particles.add_particle(stars[0])
        self.assertEquals(instance.get_name_of_current_state(), 'EDIT')
        mass = instance.particles[0].mass
        self.assertEquals(instance.get_name_of_current_state(), 'RUN')
        instance.particles.add_particle(stars[1])
        self.assertEquals(instance.get_name_of_current_state(), 'UPDATE')
        mass = instance.particles[0].mass
        self.assertEquals(instance.get_name_of_current_state(), 'RUN')
        instance.stop()
        self.assertEquals(instance.get_name_of_current_state(), 'STOPPED')
        print "ok"

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def xslowtest11(self):
        print "Test 11: Continue the stellar evolution of a 'merger product' - WIP"
        instance = EVtwin()
        instance.initialize_code()
        instance.commit_parameters()

        instance.parameters.min_timestep_stop_condition = 1.0 | units.s

        stars = Particles(3)
        stars.mass = [1.0, 2.0, 1.0] | units.MSun
        instance.particles.add_particles(stars)
        instance.commit_particles()
        instance.evolve_model(1.0 | units.Myr)
        stellar_models = instance.native_stars.get_internal_structure()

        self.assertEqual(len(stellar_models), 3)
        self.assertEqual(len(stellar_models[0]), 199)
        self.assertEqual(len(stellar_models[1]), 199)
        self.assertAlmostEqual(stellar_models[0].mass[198], 1.0 | units.MSun, 2)
        self.assertAlmostEqual(stellar_models[1].mass[198], 2.0 | units.MSun, 2)
        self.assertAlmostEqual(stellar_models[0].mass[0], 0.0 | units.MSun, 2)

        instance.new_particle_from_model(stellar_models[0], instance.particles[0].age)
        self.assertEqual(len(instance.particles), 4)
        self.assertEqual(len(instance.imported_stars), 1)
        imported_stellar_model = instance.imported_stars[0].get_internal_structure()
        self.assertEqual(len(imported_stellar_model), 199)
        self.assertAlmostEqual(imported_stellar_model.mass[198], 1.0 | units.MSun, 2)
        self.assertAlmostEqual(imported_stellar_model.mass[0], 0.0 | units.MSun, 2)
        self.assertAlmostRelativeEqual(imported_stellar_model.X_H, stellar_models[0].X_H, 5)
        self.assertAlmostRelativeEqual(imported_stellar_model.X_He, stellar_models[0].X_He, 5)
        self.assertAlmostRelativeEqual(imported_stellar_model.mass, stellar_models[0].mass, 2)
        self.assertAlmostRelativeEqual(imported_stellar_model.radius[1:], stellar_models[0].radius[1:], 2)
#        instance.evolve_model(2.0 | units.Myr)
        print instance.particles
        instance.stop()
        del instance

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
 def test7(self):
     print "Test for obtaining the stellar composition structure"
     stars = Particles(1)
     stars.mass = 1.0 | units.MSun
     instance = EVtwin()
     instance.initialize_code()
     instance.commit_parameters()
     instance.particles.add_particles(stars)
     instance.commit_particles()
     number_of_zones   = instance.particles.get_number_of_zones()[0]
     number_of_species = instance.particles.get_number_of_species()[0]
     composition       = instance.particles[0].get_chemical_abundance_profiles()
     species_names     = instance.particles[0].get_names_of_species()
     self.assertEquals(number_of_zones,    199)
     self.assertEquals(number_of_species,    9)
     self.assertEquals(len(species_names),  number_of_species)
     self.assertEquals(len(composition),    number_of_species)
     self.assertEquals(len(composition[0]), number_of_zones)
     self.assertEquals(species_names, ['h1', 'he4', 'c12', 'n14', 'o16', 'ne20', 'mg24', 'si28', 'fe56'])
     self.assertAlmostEquals(composition[0, -1],        0.7, 3)
     self.assertAlmostEquals(composition[1, -1],        0.3 - instance.parameters.metallicity, 3)
     self.assertAlmostEquals(composition[2:,-1].sum(),  instance.parameters.metallicity, 3)
     self.assertAlmostEquals(composition.sum(axis=0), [1.0]*number_of_zones)
     instance.stop()

# 需要导入模块: from amuse.community.evtwin.interface import EVtwin [as 别名]
# 或者: from amuse.community.evtwin.interface.EVtwin import commit_parameters [as 别名]
    def xtest3(self):
        instance = EVtwin()
        instance.initialize_code()
        instance.commit_parameters()
        stars = Particles(1)

        star = stars[0]
        star.mass = 5.0 | units.MSun
        star.radius = 0.0 | units.RSun

        instance.particles.add_particles(stars)
        instance.commit_particles()

        from_code_to_model = instance.particles.new_channel_to(stars)
        from_code_to_model.copy()

        previous_type = star.stellar_type
        results = []
        t0 = 0 | units.Myr
        current_time = t0

        while current_time < (115 | units.Myr):
            instance.evolve_model()
            from_code_to_model.copy()

            current_time = star.age
            print (star.age, star.mass, star.stellar_type)
            if not star.stellar_type == previous_type:
                results.append((star.age, star.mass, star.stellar_type))
                previous_type = star.stellar_type

        print results
        self.assertEqual(len(results), 6)

        times = (
            104.0 | units.Myr,
            104.4 | units.Myr,
            104.7 | units.Myr,
            120.1 | units.Myr,
            120.9 | units.Myr,
            121.5 | units.Myr
        )
        for result, expected in zip(results, times):
            self.assertAlmostEqual(result[0].value_in(units.Myr), expected.value_in(units.Myr), 1)

        masses = (
            5.000 | units.MSun,
            5.000 | units.MSun,
            4.998 | units.MSun,
            4.932 | units.MSun,
            4.895 | units.MSun,
            0.997 | units.MSun
        )
        for result, expected in zip(results, masses):
            self.assertAlmostEqual(result[1].value_in(units.MSun), expected.value_in(units.MSun), 3)

        types = (
            "Hertzsprung Gap",
            "First Giant Branch",
            "Core Helium Burning",
            "First Asymptotic Giant Branch",
            "Second Asymptotic Giant Branch",
            "Carbon/Oxygen White Dwarf",
        )

        for result, expected in zip(results, types):
            self.assertEquals(str(result[2]), expected)

        instance.stop()