本文整理汇总了Python中HelperFunctions.gatherCounts方法的典型用法代码示例。如果您正苦于以下问题：Python HelperFunctions.gatherCounts方法的具体用法？Python HelperFunctions.gatherCounts怎么用？Python HelperFunctions.gatherCounts使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类HelperFunctions的用法示例。
在下文中一共展示了HelperFunctions.gatherCounts方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Python代码示例。
示例1: gatherContributions
# 需要导入模块: import HelperFunctions [as 别名]
# 或者: from HelperFunctions import gatherCounts [as 别名]
def gatherContributions(aminoSeqList):
""" Takes a list of amino acids and returns a list of dictionaries where every entry in the dictionary
is the base and the contribution of that base to the information for that position
Args:
aminoSeqList (string): List of amino acids
Returns:
Dictionary: List of Dictionaries
"""
countsList = HelperFunctions.gatherCounts(aminoSeqList)
listOfDicts = [0 for x in range(len(countsList))]
index = 0
for oneCountList in countsList:
probabilityPerCount = HelperFunctions.calcProbs(oneCountList)
probabilityList = [value for key, value in probabilityPerCount.items()]
entropy = HelperFunctions.entropy(probabilityList)
info = HelperFunctions.information(entropy, 4)
for key, value in probabilityPerCount.items():
if (probabilityPerCount[key] == value):
probabilityPerCount[key] = value * info
listOfDicts[index] = probabilityPerCount
index = index + 1
return listOfDicts