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Java Views.translate方法代码示例

本文整理汇总了Java中net.imglib2.view.Views.translate方法的典型用法代码示例。如果您正苦于以下问题：Java Views.translate方法的具体用法？Java Views.translate怎么用？Java Views.translate使用的例子？那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类net.imglib2.view.Views的用法示例。


在下文中一共展示了Views.translate方法的15个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Java代码示例。

示例1: compute

import net.imglib2.view.Views; //导入方法依赖的package包/类
@Override
public void compute(final RandomAccessibleInterval<T> in1, final Shape in2,
	final IterableInterval<T> output)
{
	final RandomAccessibleInterval<T> extended = RAIs.extend(in1, f);
	final RandomAccessibleInterval<T> shifted;
	if (isFull) {
		final long[] offset = MorphologyUtils
				.computeTargetImageDimensionsAndOffset(in1, in2)[1];
			shifted = Views.translate(extended, offset);
	}
	else {
		shifted = extended;
	}
	mapper.compute(Views.interval(shifted, output), in2, output);
}
开发者ID:imagej，项目名称:imagej-ops，代码行数:17，代码来源:DefaultErode.java

示例2: compute

import net.imglib2.view.Views; //导入方法依赖的package包/类
@Override
public void compute(final RandomAccessibleInterval<T> in1, final Shape in2,
	final IterableInterval<T> output)
{
	final RandomAccessibleInterval<T> extended = RAIs.extend(in1, f);
	final RandomAccessibleInterval<T> shifted;
	if (isFull) {
		final long[] offset = MorphologyUtils
			.computeTargetImageDimensionsAndOffset(in1, in2)[1];
		shifted = Views.translate(extended, offset);
	}
	else {
		shifted = extended;
	}
	mapper.compute(Views.interval(shifted, output), in2, output);
}
开发者ID:imagej，项目名称:imagej-ops，代码行数:17，代码来源:DefaultDilate.java

示例3: testIntervalTranslate

import net.imglib2.view.Views; //导入方法依赖的package包/类
@Test
public void testIntervalTranslate() {
	Img<DoubleType> img = ArrayImgs.doubles(10,10);

	IntervalView<DoubleType> expected = Views.translate(img, 2, 5);
	IntervalView<DoubleType> actual = ops.transform().translateView(img, 2, 5);

	for (int i = 0; i < ((MixedTransformView<DoubleType>) expected.getSource()).getTransformToSource().getMatrix().length; i++) {
		for (int j = 0; j < ((MixedTransformView<DoubleType>) expected.getSource()).getTransformToSource().getMatrix()[i].length; j++) {
			assertEquals(((MixedTransformView<DoubleType>) expected.getSource()).getTransformToSource().getMatrix()[i][j], ((MixedTransformView<DoubleType>) actual.getSource()).getTransformToSource().getMatrix()[i][j],
					1e-10);
		}
	}
	
	assertTrue(Intervals.equals(expected, actual));
}
开发者ID:imagej，项目名称:imagej-ops，代码行数:17，代码来源:TranslateViewTest.java

示例4: createStore

import net.imglib2.view.Views; //导入方法依赖的package包/类
@Override
public RandomAccessibleInterval< U > createStore( long[] min, long[] max, U u )
{
	final long[] dimensions = new long[ min.length ];
	for ( int d = 0; d < min.length; ++d )
		dimensions[ d ] = max[ d ] - min[ d ] + 1;
	ArrayImg< U, ? > imgFac = new ArrayImgFactory< U >().create( dimensions, u );
	for ( U i : imgFac )
		i.set( initialValue );
	return Views.translate( imgFac, min );
}
开发者ID:saalfeldlab，项目名称:bigcat，代码行数:12，代码来源:GrowingStoreRandomAccessibleSingletonAccess.java

示例5: show

import net.imglib2.view.Views; //导入方法依赖的package包/类
public static void show( final String[] args ) throws ImgIOException
{
	ImageJ.main( args );
	final File file = new File( "/Users/tinevez/Desktop/iconas/Data/Uneven.tif" );
	final SCIFIOImgPlus img = new ImgOpener().openImgs( file.getAbsolutePath() ).get( 0 );

	final Shape strel = new HyperSphereShape( 5 );

	/*
	 * To new Img
	 */

	ImageJFunctions.show( img, "Source" );

	final Img topHat = TopHat.topHat( img, strel, 1 );
	ImageJFunctions.show( topHat, "WhiteTopHatToNewImg" );


	/*
	 * In place
	 */

	final Interval interval = FinalInterval.createMinSize( new long[] { 30, 50, 88, 32 } );
	final Img copy = img.copy();
	TopHat.topHatInPlace( copy, interval, strel, 1 );
	ImageJFunctions.show( copy, "WhiteTopHatInPlace" );

	/*
	 * To target
	 */

	final Img img2 = img.factory().create( interval, new UnsignedByteType() );
	final long[] translation = new long[ interval.numDimensions() ];
	interval.min( translation );
	final IntervalView translate = Views.translate( img2, translation );
	TopHat.topHat( img, translate, strel, 1 );
	ImageJFunctions.show( img2, "WhiteTopHatToTarget" );

}
开发者ID:imglib，项目名称:imglib2-tests，代码行数:40，代码来源:TopHatTests.java

示例6: defaultTranslateTest

import net.imglib2.view.Views; //导入方法依赖的package包/类
@Test
public void defaultTranslateTest() {
	Img<DoubleType> img = new ArrayImgFactory<DoubleType>().create(new int[] { 10, 10 }, new DoubleType());

	MixedTransformView<DoubleType> il2 = Views.translate( deinterval(img), 2, 5);
	MixedTransformView<DoubleType> opr = ops.transform().translateView( deinterval(img), 2, 5);


	for (int i = 0; i < il2.getTransformToSource().getMatrix().length; i++) {
		for (int j = 0; j < il2.getTransformToSource().getMatrix()[i].length; j++) {
			assertEquals(il2.getTransformToSource().getMatrix()[i][j], opr.getTransformToSource().getMatrix()[i][j],
					1e-10);
		}
	}
}
开发者ID:imagej，项目名称:imagej-ops，代码行数:16，代码来源:TranslateViewTest.java

示例7: main

import net.imglib2.view.Views; //导入方法依赖的package包/类
public static void main( String[] args )
{
	final long[] dim = new long[] { 2, 3 };
	long[] m = new long[ dim.length ];
	long[] M = new long[ dim.length ];
	ArrayImg< IntType, IntArray > img = ArrayImgs.ints( dim );
	int i = 0;
	for ( IntType c : img )
		c.set( i++ );

	Factory< IntType > factory = ( min1, max1, t1 ) -> {
		final long[] dimensions1 = new long[ min1.length ];
		for ( int d = 0; d < min1.length; ++d )
			dimensions1[ d ] = max1[ d ] - min1[ d ] + 1;
		ArrayImg< IntType, IntArray > imgFac = ArrayImgs.ints( dimensions1 );
		return Views.translate( imgFac, min1 );
	};

	Function< long[], long[] > l = ( long[] array ) -> {
		long[] result = array.clone();
		for ( int k = 0; k < result.length; ++k )
			result[ k ] = -result[ k ];
		return result;
	};

	GrowingStoreRandomAccessible< IntType > rra = new GrowingStoreRandomAccessible<>( img, factory );

	new ImageJ();
	RandomAccess< IntType > ra = rra.randomAccess();
	// Bdv bdv = BdvFunctions.show(rra, "1");

	IntType f;
	ImageJFunctions.show( Views.offsetInterval( rra, rra.getIntervalOfSizeOfStore() ), "1" );
	System.out.println( Arrays.toString( dim ) + " " + Arrays.toString( m ) + " " + Arrays.toString( M ) + " " + ra.get().get() + " " + ra + " " + rra.getIntervalOfSizeOfStore() );
	ra.setPosition( -2, 0 );
	f = ra.get();
	f.get();
	f.set( ( byte ) 25 );
	ImageJFunctions.show( Views.interval( rra, rra.getIntervalOfSizeOfStore() ), "2" );
	System.out.println( Arrays.toString( dim ) + " " + Arrays.toString( m ) + " " + Arrays.toString( M ) + " " + ra.get().get() + " " + ra + " " + rra.getIntervalOfSizeOfStore() );
	ra.setPosition( dim[ 1 ], 1 );
	f = ra.get();
	f.get();
	f.set( ( byte ) 25 );
	ImageJFunctions.show( Views.interval( rra, rra.getIntervalOfSizeOfStore() ), "3" );
	System.out.println( Arrays.toString( dim ) + " " + Arrays.toString( m ) + " " + Arrays.toString( M ) + " " + ra.get().get() + " " + ra + " " + rra.getIntervalOfSizeOfStore() );
	ra.setPosition( M );
	ra.setPosition( 32, 0 );
	ra.setPosition( 17, 1 ); // 11 now, was 17 before
	long[] pos = new long[ ra.numDimensions() ];
	ra.localize( pos );
	System.out.println( Arrays.toString( pos ) );
	f = ra.get();
	f.get();
	f.set( ( byte ) 25 );
	ImageJFunctions.show( Views.interval( rra, rra.getIntervalOfSizeOfStore() ), "4" );
	System.out.println( Arrays.toString( dim ) + " " + Arrays.toString( m ) + " " + Arrays.toString( M ) + " " + ra.get().get() + " " + ra + " " + rra.getIntervalOfSizeOfStore() );

	// {
	// RandomAccess<FloatType> accessToBeCollected = rra.randomAccess();
	// for ( WeakReference< ? > a : rra.randomAccessRefs ) {
	// System.out.println( a.get() );
	// }
	// }
	// System.gc();
	// System.gc();
	// for ( WeakReference< ? > a : rra.randomAccessRefs ) {
	// System.out.println( a.get() );
	// }

}
开发者ID:saalfeldlab，项目名称:bigcat，代码行数:72，代码来源:GrowingStoreRandomAccessible.java

示例8: chain

import net.imglib2.view.Views; //导入方法依赖的package包/类
public static void chain( final String[] args ) throws ImgIOException
	{
		final List< Shape > strel = StructuringElements.disk( 6, 2, 4 );
		for ( final Shape shape : strel )
		{
			System.out.println( shape );
			System.out.println( MorphologyUtils.printNeighborhood( shape, 2 ) );
		}

		ImageJ.main( args );

		final String fn = "DrosophilaWing.tif";
		final List< SCIFIOImgPlus< FloatType >> imgs = new
				ImgOpener().openImgs( fn, new ArrayImgFactory< FloatType >(), new
						FloatType() );
		final Img< FloatType > img = imgs.get( 0 ).getImg();

//		final ArrayImg< FloatType, FloatArray > img = ArrayImgs.floats( new long[] { 800, 600 } );
//		for ( final FloatType pixel : img )
//		{
//			pixel.set( 255f );
//		}
//		final ArrayRandomAccess< FloatType > ra = img.randomAccess();
//		final Random ran = new Random( 1l );
//		for ( int i = 0; i < 100; i++ )
//		{
//			final int x = ran.nextInt( ( int ) img.dimension( 0 ) );
//			final int y = ran.nextInt( ( int ) img.dimension( 1 ) );
//			ra.setPosition( new int[] { x, y } );
//			ra.get().set( 0f );
//		}

		ImageJFunctions.show( img, "Source" );

		final ExtendedRandomAccessibleInterval< FloatType, Img< FloatType >> extendZero = Views.extendZero( img );

		// Open to provided target
		final Interval interval2 = FinalInterval.createMinSize( new long[] { 280, 200, 185, 100 } );
		final Img< FloatType > img2 = img.factory().create( interval2, new FloatType() );
		final long[] translation = new long[ interval2.numDimensions() ];
		interval2.min( translation );
		final IntervalView< FloatType > translate = Views.translate( img2, translation );
		Opening.open( extendZero, translate, strel, 1 );
		ImageJFunctions.show( img2, "OpenedToTarget" );

		// Open to new image
		final Img< FloatType > img3 = Opening.open( img, strel, 1 );
		ImageJFunctions.show( img3, "OpenedToNewImg" );

		// Open in place
		final Interval interval = FinalInterval.createMinSize( new long[] { 100, -10, 200, 200 } );
		Opening.openInPlace( img, interval, strel, 1 );
		ImageJFunctions.show( img, "OpenedInPlace" );

		// BitType
		final Img< BitType > bitImg = Thresholder.threshold( img, new FloatType( 200f ), true, 1 );
		ImageJFunctions.show( bitImg, "BitSource" );

		final ExtendedRandomAccessibleInterval< BitType, Img< BitType >> bitExtendZero = Views.extendZero( bitImg );

		// Open to provided target
		final Img< BitType > bitImg2 = bitImg.factory().create( interval2, new BitType() );
		interval2.min( translation );
		final IntervalView< BitType > bitTranslate = Views.translate( bitImg2, translation );
		Opening.open( bitExtendZero, bitTranslate, strel, 1 );
		ImageJFunctions.show( bitImg2, "BitOpenedToTarget" );

		// Open to new image
		final Img< BitType > bitImg3 = Opening.open( bitImg, strel, 1 );
		ImageJFunctions.show( bitImg3, "bitOpenedToNewImg" );

		// Open in place
		Opening.openInPlace( bitImg, interval, strel, 1 );
		ImageJFunctions.show( bitImg, "OpenedInPlace" );
	}
开发者ID:imglib，项目名称:imglib2-tests，代码行数:76，代码来源:OpeningTests.java

示例9: show

import net.imglib2.view.Views; //导入方法依赖的package包/类
public static void show( final String[] args ) throws ImgIOException
	{
		ImageJ.main( args );
//		final Shape strel = new DiamondShape( 3 );
		final Shape strel = new HyperSphereShape( 6 );

		final String fn = "DrosophilaWing.tif";
		final List< SCIFIOImgPlus< FloatType >> imgs = new
				ImgOpener().openImgs( fn, new ArrayImgFactory< FloatType >(), new
						FloatType() );
		final Img< FloatType > img = imgs.get( 0 ).getImg();

//		final ArrayImg< FloatType, FloatArray > img = ArrayImgs.floats( new long[] { 800, 600 } );
//		for ( final FloatType pixel : img )
//		{
//			pixel.set( 255f );
//		}
//		final ArrayRandomAccess< FloatType > ra = img.randomAccess();
//		final Random ran = new Random( 1l );
//		for ( int i = 0; i < 100; i++ )
//		{
//			final int x = ran.nextInt( ( int ) img.dimension( 0 ) );
//			final int y = ran.nextInt( ( int ) img.dimension( 1 ) );
//			ra.setPosition( new int[] { x, y } );
//			ra.get().set( 0f );
//		}

		ImageJFunctions.show( img, "Source" );

		final ExtendedRandomAccessibleInterval< FloatType, Img< FloatType >> extendZero = Views.extendZero( img );

		// Open to provided target
		final Interval interval2 = FinalInterval.createMinSize( new long[] { 280, 200, 185, 100 } );
		final Img< FloatType > img2 = img.factory().create( interval2, new FloatType() );
		final long[] translation = new long[ interval2.numDimensions() ];
		interval2.min( translation );
		final IntervalView< FloatType > translate = Views.translate( img2, translation );
		Opening.open( extendZero, translate, strel, 1 );
		ImageJFunctions.show( img2, "OpenedToTarget" );

		// Open to new image
		final Img< FloatType > img3 = Opening.open( img, strel, 1 );
		ImageJFunctions.show( img3, "OpenedToNewImg" );

		// Open in place
		final Interval interval = FinalInterval.createMinSize( new long[] { 100, -10, 200, 200 } );
		Opening.openInPlace( img, interval, strel, 1 );
		ImageJFunctions.show( img, "OpenedInPlace" );

		// BitType
		final Img< BitType > bitImg = Thresholder.threshold( img, new FloatType( 200f ), true, 1 );
		ImageJFunctions.show( bitImg, "BitSource" );

		final ExtendedRandomAccessibleInterval< BitType, Img< BitType >> bitExtendZero = Views.extendZero( bitImg );

		// Open to provided target
		final Img< BitType > bitImg2 = bitImg.factory().create( interval2, new BitType() );
		interval2.min( translation );
		final IntervalView< BitType > bitTranslate = Views.translate( bitImg2, translation );
		Opening.open( bitExtendZero, bitTranslate, strel, 1 );
		ImageJFunctions.show( bitImg2, "BitOpenedToTarget" );

		// Open to new image
		final Img< BitType > bitImg3 = Opening.open( bitImg, strel, 1 );
		ImageJFunctions.show( bitImg3, "bitOpenedToNewImg" );

		// Open in place
		Opening.openInPlace( bitImg, interval, strel, 1 );
		ImageJFunctions.show( bitImg, "OpenedInPlace" );
	}
开发者ID:imglib，项目名称:imglib2-tests，代码行数:71，代码来源:OpeningTests.java

示例10: main

import net.imglib2.view.Views; //导入方法依赖的package包/类
public static void main( final String[] args ) throws ImgIOException
{
	ImageJ.main( args );
	final File file = new File( "DrosophilaWing.tif" );
	final SCIFIOImgPlus img = new ImgOpener().openImgs( file.getAbsolutePath() ).get( 0 );
	final Img< UnsignedByteType > imgInv = img.copy();
	final Cursor< UnsignedByteType > cursor = img.cursor();
	final Cursor< UnsignedByteType > cursor2 = imgInv.cursor();
	while ( cursor.hasNext() )
	{
		cursor.fwd();
		cursor2.fwd();
		cursor2.get().set( 255 - cursor.get().get() );
	}

	final Shape strel = new HyperSphereShape( 5 );

	/*
	 * To new Img
	 */

	ImageJFunctions.show( imgInv, "Source" );

	final Img blackTopHat = BlackTopHat.blackTopHat( imgInv, strel, 1 );
	ImageJFunctions.show( blackTopHat, "BlackTopHatToNewImg" );

	/*
	 * In place
	 */

	final Interval interval = FinalInterval.createMinSize( new long[] { 7, 35, 88, 32 } );

	final Img copy2 = imgInv.copy();
	BlackTopHat.blackTopHatInPlace( copy2, interval, strel, 1 );
	ImageJFunctions.show( copy2, "BlackTopHatInPlace" );

	/*
	 * To target
	 */

	final Img img2 = img.factory().create( interval, new UnsignedByteType() );
	final long[] translation = new long[ interval.numDimensions() ];
	interval.min( translation );
	final IntervalView translate = Views.translate( img2, translation );
	BlackTopHat.blackTopHat( imgInv, translate, strel, 1 );
	ImageJFunctions.show( img2, "BlackTopHatToTarget" );

}
开发者ID:imglib，项目名称:imglib2-tests，代码行数:49，代码来源:BlackTopHatTests.java

示例11: chain

import net.imglib2.view.Views; //导入方法依赖的package包/类
private static void chain( final String[] args )
{
	ImageJ.main( args );

	final ArrayImg< UnsignedByteType, ByteArray > img = ArrayImgs.unsignedBytes( 50l, 50l );
	for ( final UnsignedByteType pixel : img )
	{
		pixel.set( 255 );
	}
	final ArrayRandomAccess< UnsignedByteType > randomAccess = img.randomAccess();
	randomAccess.setPosition( new int[] { 0, 25 } );
	randomAccess.get().set( 0 );
	randomAccess.setPosition( new int[] { 35, 25 } );
	randomAccess.get().set( 0 );

	final DiamondShape diamondShape = new DiamondShape( 8 );
	ImageJFunctions.show( img, "Source" );

	// New Source
	ImageJFunctions.show( Erosion.erode( img, StructuringElements.diamond( 8, 2, true ), 1 ), "NewSourceDecomp" );
	ImageJFunctions.show( Erosion.erode( img, StructuringElements.diamond( 8, 2, false ), 1 ), "NewSourceStraight" );
	ImageJFunctions.show( Erosion.erode( img, diamondShape, 1 ), "NewSourceSingle" );

	// Full
	ImageJFunctions.show( Erosion.erodeFull( img, StructuringElements.diamond( 8, 2, true ), 1 ), "NewFullSourceDecomp" );
	ImageJFunctions.show( Erosion.erodeFull( img, StructuringElements.diamond( 8, 2, false ), 1 ), "NewFullSourceStraight" );
	ImageJFunctions.show( Erosion.erodeFull( img, diamondShape, 1 ), "NewFullSourceSingle" );

	// To target
	final Interval interval = FinalInterval.createMinSize( 10, 10, 20, 20 );
	final long[] min = new long[ interval.numDimensions() ];
	interval.min( min );

	final Img< UnsignedByteType > result1 = img.factory().create( interval, img.firstElement().copy() );
	final IntervalView< UnsignedByteType > target1 = Views.translate( result1, min );
	Erosion.erode( img, target1, StructuringElements.diamond( 8, 2, true ), 1 );
	ImageJFunctions.show( result1, "ToTargetDecomp" );

	final Img< UnsignedByteType > result2 = img.factory().create( interval, img.firstElement().copy() );
	final IntervalView< UnsignedByteType > target2 = Views.translate( result2, min );
	Erosion.erode( img, target2, StructuringElements.diamond( 8, 2, false ), 1 );
	ImageJFunctions.show( result2, "ToTargetStraight" );

	final Img< UnsignedByteType > result3 = img.factory().create( interval, img.firstElement().copy() );
	final IntervalView< UnsignedByteType > target3 = Views.translate( result3, min );
	Erosion.erode( img, target3, diamondShape, 1 );
	ImageJFunctions.show( result3, "ToTargetSingle" );

}
开发者ID:imglib，项目名称:imglib2-tests，代码行数:50，代码来源:ErosionTests.java

示例12: show

import net.imglib2.view.Views; //导入方法依赖的package包/类
public static void show( final String[] args ) throws ImgIOException
	{
		ImageJ.main( args );
		final Shape strel = new DiamondShape( 3 );

		final String fn = "DrosophilaWing.tif";
		final List< SCIFIOImgPlus< FloatType >> imgs = new
				ImgOpener().openImgs( fn, new ArrayImgFactory< FloatType >(), new
						FloatType() );
		final Img< FloatType > img = imgs.get( 0 ).getImg();

//		final ArrayImg< FloatType, FloatArray > img = ArrayImgs.floats( new long[] { 800, 600 } );
//		final ArrayRandomAccess< FloatType > ra = img.randomAccess();
//		final Random ran = new Random( 1l );
//		for ( int i = 0; i < 100; i++ )
//		{
//			final int x = ran.nextInt( ( int ) img.dimension( 0 ) );
//			final int y = ran.nextInt( ( int ) img.dimension( 1 ) );
//			ra.setPosition( new int[] { x, y } );
//			ra.get().set( 255f );
//		}

		ImageJFunctions.show( img, "Source" );

		// Dilate to provided target
		final Interval interval2 = FinalInterval.createMinSize( new long[] { 280, 200, 185, 100 } );
		final Img< FloatType > img2 = img.factory().create( interval2, new FloatType() );
		final long[] translation = new long[ interval2.numDimensions() ];
		interval2.min( translation );
		final IntervalView< FloatType > translate = Views.translate( img2, translation );
		Dilation.dilate( img, translate, strel, 1 );
		ImageJFunctions.show( img2, "DilatedToTarget" );

		// Dilate to new image
		final Img< FloatType > img3 = Dilation.dilate( img, strel, 1 );
		ImageJFunctions.show( img3, "DilatedToNewImg" );

		// Dilate to new image FULL version.
		final Img< FloatType > img4 = Dilation.dilateFull( img, strel, 1 );
		ImageJFunctions.show( img4, "DilatedToNewImgFULL" );

		// Dilate in place
		final Interval interval = FinalInterval.createMinSize( new long[] { 100, -10, 200, 200 } );
		Dilation.dilateInPlace( img, interval, strel, 1 );
		ImageJFunctions.show( img, "DilatedInPlace" );

		/*
		 * Binary type
		 */

		final ArrayImg< BitType, LongArray > bitsImg = ArrayImgs.bits( new long[] { 800, 600 } );

		final ArrayRandomAccess< BitType > raBits = bitsImg.randomAccess(); // LOL
		final Random ran2 = new Random( 1l );
		for ( int i = 0; i < 100; i++ )
		{
			final int x = ran2.nextInt( ( int ) bitsImg.dimension( 0 ) );
			final int y = ran2.nextInt( ( int ) bitsImg.dimension( 1 ) );
			raBits.setPosition( new int[] { x, y } );
			raBits.get().set( true );
		}
		ImageJFunctions.show( bitsImg, "BitsSource" );

		// Dilate to new image
		final Img< BitType > imgBits3 = Dilation.dilate( bitsImg, strel, 1 );
		ImageJFunctions.show( imgBits3, "BitsDilatedToNewImg" );

	}
开发者ID:imglib，项目名称:imglib2-tests，代码行数:69，代码来源:DilationTests.java

示例13: chain

import net.imglib2.view.Views; //导入方法依赖的package包/类
public static void chain( final String[] args ) throws ImgIOException
	{
		final List< Shape > strel = StructuringElements.disk( 6, 2, 4 );
		for ( final Shape shape : strel )
		{
			System.out.println( shape );
			System.out.println( MorphologyUtils.printNeighborhood( shape, 2 ) );
		}

		ImageJ.main( args );

		final String fn = "DrosophilaWing.tif";
		final List< SCIFIOImgPlus< UnsignedByteType >> imgs = new
				ImgOpener().openImgs( fn, new ArrayImgFactory< UnsignedByteType >(), new
						UnsignedByteType() );
		final Img< UnsignedByteType > img = imgs.get( 0 ).getImg();

//		final ArrayImg< UnsignedByteType, FloatArray > img = ArrayImgs.floats( new long[] { 800, 600 } );
//		for ( final UnsignedByteType pixel : img )
//		{
//			pixel.set( 255f );
//		}
//		final ArrayRandomAccess< UnsignedByteType > ra = img.randomAccess();
//		final Random ran = new Random( 1l );
//		for ( int i = 0; i < 100; i++ )
//		{
//			final int x = ran.nextInt( ( int ) img.dimension( 0 ) );
//			final int y = ran.nextInt( ( int ) img.dimension( 1 ) );
//			ra.setPosition( new int[] { x, y } );
//			ra.get().set( 0f );
//		}

		ImageJFunctions.show( img, "Source" );

		final ExtendedRandomAccessibleInterval< UnsignedByteType, Img< UnsignedByteType >> extendZero = Views.extendZero( img );

		// Close to provided target
		final Interval interval2 = FinalInterval.createMinSize( new long[] { 280, 200, 185, 100 } );
		final Img< UnsignedByteType > img2 = img.factory().create( interval2, new UnsignedByteType() );
		final long[] translation = new long[ interval2.numDimensions() ];
		interval2.min( translation );
		final IntervalView< UnsignedByteType > translate = Views.translate( img2, translation );
		Closing.close( extendZero, translate, strel, 1 );
		ImageJFunctions.show( img2, "ClosedToTarget" );

		// Close to new image
		final Img< UnsignedByteType > img3 = Closing.close( img, strel, 1 );
		ImageJFunctions.show( img3, "ClosedToNewImg" );

		// Close in place
		final Interval interval = FinalInterval.createMinSize( new long[] { 100, -10, 200, 200 } );
		Closing.closeInPlace( img, interval, strel, 1 );
		ImageJFunctions.show( img, "ClosedInPlace" );

		// BitType
		final Img< BitType > bitImg = Thresholder.threshold( img, new UnsignedByteType( 100 ), true, 1 );
		ImageJFunctions.show( bitImg, "BitSource" );

		final ExtendedRandomAccessibleInterval< BitType, Img< BitType >> bitExtendZero = Views.extendZero( bitImg );

		// Close to provided target
		final Img< BitType > bitImg2 = bitImg.factory().create( interval2, new BitType() );
		interval2.min( translation );
		final IntervalView< BitType > bitTranslate = Views.translate( bitImg2, translation );
		Closing.close( bitExtendZero, bitTranslate, strel, 1 );
		ImageJFunctions.show( bitImg2, "BitClosedToTarget" );

		// Close to new image
		final Img< BitType > bitImg3 = Closing.close( bitImg, strel, 1 );
		ImageJFunctions.show( bitImg3, "bitClosedToNewImg" );

		// Close in place
		Closing.closeInPlace( bitImg, interval, strel, 1 );
		ImageJFunctions.show( bitImg, "ClosedInPlace" );
	}
开发者ID:imglib，项目名称:imglib2-tests，代码行数:76，代码来源:ClosingTests.java

示例14: show

import net.imglib2.view.Views; //导入方法依赖的package包/类
public static void show( final String[] args ) throws ImgIOException
	{
		ImageJ.main( args );
		final Shape strel = new DiamondShape( 3 );
//		final Shape strel = new HyperSphereShape( 6 );

		final String fn = "DrosophilaWing.tif";
		final List< SCIFIOImgPlus< UnsignedByteType >> imgs = new
				ImgOpener().openImgs( fn, new ArrayImgFactory< UnsignedByteType >(), new
						UnsignedByteType() );
		final Img< UnsignedByteType > img = imgs.get( 0 ).getImg();

//		final ArrayImg< UnsignedByteType, FloatArray > img = ArrayImgs.floats( new long[] { 800, 600 } );
//		for ( final UnsignedByteType pixel : img )
//		{
//			pixel.set( 255f );
//		}
//		final ArrayRandomAccess< UnsignedByteType > ra = img.randomAccess();
//		final Random ran = new Random( 1l );
//		for ( int i = 0; i < 100; i++ )
//		{
//			final int x = ran.nextInt( ( int ) img.dimension( 0 ) );
//			final int y = ran.nextInt( ( int ) img.dimension( 1 ) );
//			ra.setPosition( new int[] { x, y } );
//			ra.get().set( 0f );
//		}

		ImageJFunctions.show( img, "Source" );

		final ExtendedRandomAccessibleInterval< UnsignedByteType, Img< UnsignedByteType >> extendZero = Views.extendZero( img );

		// Close to provided target
		final Interval interval2 = FinalInterval.createMinSize( new long[] { 280, 200, 185, 100 } );
		final Img< UnsignedByteType > img2 = img.factory().create( interval2, new UnsignedByteType() );
		final long[] translation = new long[ interval2.numDimensions() ];
		interval2.min( translation );
		final IntervalView< UnsignedByteType > translate = Views.translate( img2, translation );
		Closing.close( extendZero, translate, strel, 1 );
		ImageJFunctions.show( img2, "ClosedToTarget" );

		// Close to new image
		final Img< UnsignedByteType > img3 = Closing.close( img, strel, 1 );
		ImageJFunctions.show( img3, "ClosedToNewImg" );

		// Close in place
		final Interval interval = FinalInterval.createMinSize( new long[] { 100, -10, 200, 200 } );
		Closing.closeInPlace( img, interval, strel, 1 );
		ImageJFunctions.show( img, "ClosedInPlace" );

		// BitType
		final Img< BitType > bitImg = Thresholder.threshold( img, new UnsignedByteType( 100 ), true, 1 );
		ImageJFunctions.show( bitImg, "BitSource" );

		final ExtendedRandomAccessibleInterval< BitType, Img< BitType >> bitExtendZero = Views.extendZero( bitImg );

		// Close to provided target
		final Img< BitType > bitImg2 = bitImg.factory().create( interval2, new BitType() );
		interval2.min( translation );
		final IntervalView< BitType > bitTranslate = Views.translate( bitImg2, translation );
		Closing.close( bitExtendZero, bitTranslate, strel, 1 );
		ImageJFunctions.show( bitImg2, "BitClosedToTarget" );

		// Close to new image
		final Img< BitType > bitImg3 = Closing.close( bitImg, strel, 1 );
		ImageJFunctions.show( bitImg3, "bitClosedToNewImg" );

		// Close in place
		Closing.closeInPlace( bitImg, interval, strel, 1 );
		ImageJFunctions.show( bitImg, "ClosedInPlace" );
	}
开发者ID:imglib，项目名称:imglib2-tests，代码行数:71，代码来源:ClosingTests.java

示例15: calculate

import net.imglib2.view.Views; //导入方法依赖的package包/类
@Override
public IntervalView<T> calculate(final RandomAccessibleInterval<T> input) {
	return Views.translate(input, translation);
}
开发者ID:imagej，项目名称:imagej-ops，代码行数:5，代码来源:IntervalTranslateView.java


注：本文中的net.imglib2.view.Views.translate方法示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。