本文整理汇总了Java中loci.formats.ImageReader.setId方法的典型用法代码示例。如果您正苦于以下问题：Java ImageReader.setId方法的具体用法？Java ImageReader.setId怎么用？Java ImageReader.setId使用的例子？那么恭喜您, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类loci.formats.ImageReader的用法示例。
在下文中一共展示了ImageReader.setId方法的5个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Java代码示例。
示例1: getRealResolutionCount
import loci.formats.ImageReader; //导入方法依赖的package包/类
@Deprecated
private int getRealResolutionCount(IFormatReader imageReader) throws IOException, FormatException {
ImageReader ir = new ImageReader();
ir.setFlattenedResolutions(false);
ir.setId(imageReader.getCurrentFile());
ir.setSeries(imageReader.getSeries());
int numRes = 1;
for (int lev=imageReader.getResolutionCount()-1; lev>=0; lev--) {
numRes = lev;
ir.setResolution(lev);
int thumbW = ir.getSizeX();
int thumbH = ir.getSizeY();
double diff = Math.abs((thumbW/(double)thumbH) - (imageReader.getSizeX()/(double)imageReader.getSizeY()));
System.out.println("diff: "+diff);
if (diff<0.001) break;
}
ir.close();
return numRes;
}
示例2: identify
import loci.formats.ImageReader; //导入方法依赖的package包/类
@Override
public ImageInput identify(ImageInput ii) throws IOException {
ImageReader reader = new ImageReader();
try {
reader.setId(ii.getFile().getAbsolutePath());
} catch (FormatException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
int width = reader.getSizeX();
int height = reader.getSizeY();
String fmt = reader.getFormat();
String mt = "";
if (fmt.equalsIgnoreCase("Tagged Image File Format")) {
mt = "image/tiff";
} else if (fmt.equalsIgnoreCase("JPEG")) {
mt = "image/jpeg";
}
logger.debug("BioFormats identify: width=" + width + " height=" + height + " format=" + fmt + " mimetype=" + mt);
ii.setSize(new ImageSize(width, height));
ii.setMimetype(mt);
return ii;
}
示例3: typedParse
import loci.formats.ImageReader; //导入方法依赖的package包/类
@Override
protected void typedParse(final RandomAccessInputStream stream,
final Metadata meta, final SCIFIOConfig config) throws IOException,
FormatException
{
try {
final ImageReader reader = createImageReader(this);
meta.setReader(reader);
MetadataStore store = new OMEXMLMetadataImpl();
reader.setMetadataStore(store);
reader.setOriginalMetadataPopulated(config.parserIsSaveOriginalMetadata());
reader.setMetadataFiltered(config.parserIsFiltered());
reader.setGroupFiles(config.groupableIsGroupFiles());
reader.setId(stream.getFileName());
meta.setTable(new DefaultMetaTable(reader.getGlobalMetadata()));
}
catch (final loci.formats.FormatException e) {
throw new FormatException(e);
}
}
示例4: testImageReaderInstantiation
import loci.formats.ImageReader; //导入方法依赖的package包/类
@Test
public void testImageReaderInstantiation()
throws URISyntaxException, FormatException, IOException {
URL resource = this.getClass().getClassLoader().getResource(
"org/cellprofiler/imageset/omexml.xml");
Path path = Paths.get(resource.toURI());
ImageReader reader = new ImageReader();
try {
reader.setId(path.toString());
assertEquals(4, reader.getSeriesCount());
} finally {
reader.close();
}
}
示例5: main
import loci.formats.ImageReader; //导入方法依赖的package包/类
public static void main( String[] args ) throws IOException, FormatException
{
LandmarkTableModel ltm = new LandmarkTableModel( Integer.parseInt( args[ 0 ] ) );
ltm.load( new File( args[ 1 ] ) );
ThinPlateR2LogRSplineKernelTransform xfm = ltm.getTransform();
String srcName = args[ 2 ];
String template = args[ 3 ];
String dstName = args[ 4 ];
ImagePlus impP = IJ.openImage( srcName );
// read image properties from the header
ImageReader reader = new ImageReader();
reader.setId( template );
String[] names = new String[]{ impP.getTitle(), "target_interval" };
/* Load the first source */
final ImagePlusLoader loaderP = new ImagePlusLoader( impP );
final AbstractSpimData< ? >[] spimDataP = loaderP.loadAll( 0 );
int numMovingChannels = loaderP.numChannels();
final AbstractSpimData< ? >[] spimDataQ = new AbstractSpimData[]{ createSpimData( reader ) };
BigWarpExporter< ? > exporter = BigWarpBatchTransformFOV.applyBigWarpHelper( spimDataP, spimDataQ, impP, ltm, Interpolation.NLINEAR );
ImagePlus ipout = exporter.exportMovingImagePlus( false );
IJ.save( ipout, dstName );
}