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Java Roi.getType方法代码示例

本文整理汇总了Java中ij.gui.Roi.getType方法的典型用法代码示例。如果您正苦于以下问题：Java Roi.getType方法的具体用法？Java Roi.getType怎么用？Java Roi.getType使用的例子？那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类ij.gui.Roi的用法示例。


在下文中一共展示了Roi.getType方法的15个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Java代码示例。

示例1: fillOutside

import ij.gui.Roi; //导入方法依赖的package包/类
/**
	 * Fill in a region outside a specified ROI
	 * @param ip
	 * @param roi
	 */
	public static void fillOutside(ImageProcessor ip, Roi roi, double value) {
		// Check we don't have a full rectangle
		if (roi.getType() == Roi.RECTANGLE && roi.getBounds().equals(new Rectangle(0, 0, ip.getWidth(), ip.getHeight())))
			return;
//		if (roi instanceof ShapeRoi) {
			// Appears to be a bug with ShapeRois so that filling outside can fail using ImageJ's own code
			ByteProcessor bpMask = new ByteProcessor(ip.getWidth(), ip.getHeight());
			bpMask.setValue(1);
			bpMask.fill(roi);
			if (value == 0)
				ip.copyBits(bpMask, 0, 0, Blitter.MULTIPLY);
			else {
				float floatValue = (float)value;
				byte[] px = (byte[])bpMask.getPixels();
				for (int i = 0; i < px.length; i++) {
					if (px[i] == (byte)0)
						ip.setf(i, floatValue);
				}
			}
//		} else {
//			ip.setValue(value);
//			ip.fillOutside(roi);
//		}
	}
开发者ID:qupath，项目名称:qupath，代码行数:30，代码来源:ROILabeling.java

示例2: convertToPathROI

import ij.gui.Roi; //导入方法依赖的package包/类
/**
	 * Create a ROI from an ImageJ Roi.
	 * 
	 * @param pathROI
	 * @param pathImage
	 * @return
	 */
	public static ROI convertToPathROI(Roi roi, Calibration cal, double downsampleFactor, final int c, final int z, final int t) {
//		if (roi.getType() == Roi.POLYGON || roi.getType() == Roi.TRACED_ROI)
//			return convertToPolygonROI((PolygonRoi)roi, cal, downsampleFactor);
		if (roi.getType() == Roi.RECTANGLE && roi.getCornerDiameter() == 0)
			return getRectangleROI(roi, cal, downsampleFactor, c, z, t);
		if (roi.getType() == Roi.OVAL)
			return convertToEllipseROI(roi, cal, downsampleFactor, c, z, t);
		if (roi instanceof Line)
			return convertToLineROI((Line)roi, cal, downsampleFactor, c, z, t);
		if (roi instanceof PointRoi)
			return convertToPointROI((PolygonRoi)roi, cal, downsampleFactor, c, z, t);
//		if (roi instanceof ShapeRoi)
//			return convertToAreaROI((ShapeRoi)roi, cal, downsampleFactor);
//		// Shape ROIs should be able to handle most eventualities
		if (roi instanceof ShapeRoi)
			return convertToAreaROI((ShapeRoi)roi, cal, downsampleFactor, c, z, t);
		if (roi.isArea())
			return convertToPolygonOrAreaROI(roi, cal, downsampleFactor, c, z, t);
		// TODO: Integrate ROI not supported exception...?
		return null;	
	}
开发者ID:qupath，项目名称:qupath，代码行数:29，代码来源:ROIConverterIJ.java

示例3: getImageList

import ij.gui.Roi; //导入方法依赖的package包/类
private static String[] getImageList()
{
	TurboList<String> newImageList = new TurboList<String>();

	for (int id : Utils.getIDList())
	{
		ImagePlus imp = WindowManager.getImage(id);
		if (imp == null)
			continue;
		if (imp.getNDimensions() != 3)
			continue;
		if (imp.getBitDepth() == 24)
			continue;
		Roi roi = imp.getRoi();
		if (roi == null || roi.getType() != Roi.POINT)
			continue;
		newImageList.add(imp.getTitle());
	}

	return newImageList.toArray(new String[0]);
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:22，代码来源:AstigmatismModelManager.java

示例4: findFitRegion

import ij.gui.Roi; //导入方法依赖的package包/类
private boolean findFitRegion()
{
	// Get the centre
	Roi roi = imp.getRoi();
	if (roi != null && roi.getType() == Roi.POINT)
	{
		FloatPolygon p = roi.getFloatPolygon();
		int n = p.npoints;
		if (n != 1)
		{
			IJ.error(TITLE, "Require a single point ROI");
			return false;
		}
		cx = (int) p.xpoints[0];
		cy = (int) p.ypoints[0];
		return true;
	}
	IJ.error(TITLE, "Require a single point ROI");
	return false;
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:21，代码来源:AstigmatismModelManager.java

示例5: setup

import ij.gui.Roi; //导入方法依赖的package包/类
public int setup(String arg, ImagePlus imp)
{
	SMLMUsageTracker.recordPlugin(this.getClass(), arg);

	if (imp == null)
	{
		IJ.noImage();
		return DONE;
	}

	Roi roi = imp.getRoi();
	if (roi == null || roi.getType() != Roi.POINT)
	{
		IJ.error("Point ROI required");
		return DONE;
	}

	this.imp = imp;

	return showDialog();
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:22，代码来源:PSFCreator.java

示例6: getSpots

import ij.gui.Roi; //导入方法依赖的package包/类
/**
 * @return Extract all the ROI points
 */
private BasePoint[] getSpots()
{
	float z = imp.getStackSize() / 2;
	Roi roi = imp.getRoi();
	if (roi != null && roi.getType() == Roi.POINT)
	{
		FloatPolygon p = roi.getFloatPolygon();
		int n = p.npoints;

		float offset = 0.5f;

		// Check if already float coordinates
		if (!SimpleArrayUtils.isInteger(p.xpoints) || !SimpleArrayUtils.isInteger(p.ypoints))
			offset = 0;

		BasePoint[] roiPoints = new BasePoint[n];
		for (int i = 0; i < n; i++)
		{
			roiPoints[i] = new BasePoint(p.xpoints[i] + offset, p.ypoints[i] + offset, z);
		}
		return roiPoints;
	}
	return new BasePoint[0];
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:28，代码来源:PSFCreator.java

示例7: setup

import ij.gui.Roi; //导入方法依赖的package包/类
public int setup(String arg, ImagePlus imp)
{
	SMLMUsageTracker.recordPlugin(this.getClass(), arg);

	if (imp == null)
	{
		IJ.noImage();
		return DONE;
	}

	Roi roi = imp.getRoi();
	if (roi != null && roi.getType() != Roi.RECTANGLE)
	{
		IJ.error("Rectangular ROI required");
		return DONE;
	}

	this.imp = imp;
	if (arg.equals("final"))
	{
		runFinal(imp.getProcessor());
		return DONE;
	}

	return flags;
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:27，代码来源:GaussianFit.java

示例8: makePoint

import ij.gui.Roi; //导入方法依赖的package包/类
/** Creates a point selection. */
public static void makePoint(int x, int y) {
	ImagePlus img = getImage();
	Roi roi = img.getRoi();
	if (shiftKeyDown() && roi!=null && roi.getType()==Roi.POINT) {
		Polygon p = roi.getPolygon();
		p.addPoint(x, y);
		img.setRoi(new PointRoi(p.xpoints, p.ypoints, p.npoints));
	} else
		img.setRoi(new PointRoi(x, y));
}
开发者ID:darciopacifico，项目名称:omr，代码行数:12，代码来源:IJJazzOMR.java

示例9: hideOverlay

import ij.gui.Roi; //导入方法依赖的package包/类
/**
 * Hides the overlay and restores the ROI
 */
private void hideOverlay()
{
	// Kill the overlay
	activeImp.setOverlay(null);

	Roi roi = activeImp.getRoi();
	if (roi != null)
	{
		// If this is a new point then merge it into the saved Point ROI
		if (roi.getType() == Roi.POINT && savedRoi != null)
		{
			// Merge the current ROI and the saved one
			PointRoi pointRoi = (PointRoi) savedRoi;
			AssignedPoint[] newPoints = PointManager.extractRoiPoints(roi);
			for (AssignedPoint p : newPoints)
			{
				//pointRoi = pointRoi.addPoint(p.getX() - pointRoi.getBounds().x, p.getY() - pointRoi.getBounds().y);
				pointRoi = pointRoi.addPoint(p.getX(), p.getY());
			}
			activeImp.setRoi(pointRoi, true);
		}
	}
	else
	{
		// No new ROI so just restore from the old one 
		activeImp.restoreRoi();
	}

	savedRoi = null;
}
开发者ID:aherbert，项目名称:GDSC，代码行数:34，代码来源:FindFociHelperView.java

示例10: getImage

import ij.gui.Roi; //导入方法依赖的package包/类
private boolean getImage()
{
	// Select an image
	GenericDialog gd = new GenericDialog(TITLE);
	String[] list = getImageList();
	if (list.length == 0)
	{
		IJ.error("No suitable images");
		return false;
	}
	gd.addChoice("Image", list, pluginSettings.getImage());
	gd.showDialog();
	if (gd.wasCanceled())
		return false;
	String image = gd.getNextChoice();
	pluginSettings.setImage(image);
	imp = WindowManager.getImage(image);
	if (imp == null)
	{
		IJ.error(TITLE, "Failed to find image: " + image);
		return false;
	}
	Roi roi = imp.getRoi();
	if (roi == null || roi.getType() != Roi.POINT)
	{
		IJ.error("Point ROI required");
		return false;
	}
	return true;
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:31，代码来源:AstigmatismModelManager.java

示例11: setup

import ij.gui.Roi; //导入方法依赖的package包/类
public int setup(String arg, ImagePlus imp)
{
	SMLMUsageTracker.recordPlugin(this.getClass(), arg);

	extraOptions = Utils.isExtraOptions();
	if (imp == null)
	{
		IJ.noImage();
		return DONE;
	}

	settings = SettingsManager.readPSFEstimatorSettings(0).toBuilder();
	// Reset
	if (IJ.controlKeyDown())
	{
		config = new FitEngineConfiguration();
		Calibration calibration = SettingsManager.readCalibration(0);
		config.getFitConfiguration().setCalibration(calibration);
	}
	else
	{
		config = SettingsManager.readFitEngineConfiguration(0);
	}

	Roi roi = imp.getRoi();
	if (roi != null && roi.getType() != Roi.RECTANGLE)
	{
		IJ.error("Rectangular ROI required");
		return DONE;
	}

	return showDialog(imp);
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:34，代码来源:PSFEstimator.java

示例12: setup

import ij.gui.Roi; //导入方法依赖的package包/类
public int setup(String arg, ImagePlus imp)
{
	if (arg.equals("final"))
	{
		//imp.resetDisplayRange();
		imp.updateAndDraw();

		return DONE;
	}

	SMLMUsageTracker.recordPlugin(this.getClass(), arg);

	if (imp == null)
	{
		IJ.noImage();
		return DONE;
	}

	Roi roi = imp.getRoi();
	if (roi != null && roi.getType() != Roi.RECTANGLE)
	{
		IJ.error("Rectangular ROI required");
		return DONE;
	}

	return flags;
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:28，代码来源:SmoothImage.java

示例13: getOnlyRectangularRoi

import ij.gui.Roi; //导入方法依赖的package包/类
protected static Roi getOnlyRectangularRoi( Roi roi )
{
	// we can only do rectangular rois
	if ( roi != null && roi.getType() != Roi.RECTANGLE )
		return null;
	return roi;
}
开发者ID:fiji，项目名称:Stitching，代码行数:8，代码来源:PairWiseStitchingImgLib.java

示例14: mouseReleased

import ij.gui.Roi; //导入方法依赖的package包/类
@Override
public void mouseReleased( final MouseEvent e )
{
	// here the ROI might have been modified, let's test for that
	final Roi roi = imp.getRoi();
	
	if ( roi == null || roi.getType() != Roi.RECTANGLE )
		return;
	
	while ( isComputing )
		SimpleMultiThreading.threadWait( 10 );
	
	updatePreview( ValueChange.ROI );				
}
开发者ID:fiji，项目名称:SPIM_Registration，代码行数:15，代码来源:InteractiveDoG.java

示例15: updateImageList

import ij.gui.Roi; //导入方法依赖的package包/类
@Override
public void updateImageList()
{
	int noOfImages = WindowManager.getImageCount();
	List<String> imageList = new ArrayList<String>(noOfImages);
	for (int id : gdsc.core.ij.Utils.getIDList())
	{
		ImagePlus imp = WindowManager.getImage(id);

		// Image must be 8-bit/16-bit/32-bit && only contains XYZ dimensions
		if (imp != null && (imp.getType() == ImagePlus.GRAY8 || imp.getType() == ImagePlus.GRAY16 ||
				imp.getType() == ImagePlus.GRAY32) && (imp.getNChannels() == 1 && imp.getNFrames() == 1))
		{
			Roi roi = imp.getRoi();
			if (roi == null || roi.getType() != Roi.POINT)
				continue;

			// Check it is not one the result images
			String imageTitle = imp.getTitle();
			if (!imageTitle.endsWith(FindFoci.TITLE) && !imageTitle.endsWith("clone") &&
					!imageTitle.endsWith(" TP") && !imageTitle.endsWith(" FP") && !imageTitle.endsWith(" FN"))
			{
				imageList.add(imageTitle);
			}
		}
	}

	model.setImageList(imageList);
}
开发者ID:aherbert，项目名称:GDSC，代码行数:30，代码来源:OptimiserController.java


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