本文整理汇总了Java中com.google.genomics.v1.Reference.getName方法的典型用法代码示例。如果您正苦于以下问题：Java Reference.getName方法的具体用法？Java Reference.getName怎么用？Java Reference.getName使用的例子？那么, 这里精选的方法代码示例或许可以为您提供帮助。您也可以进一步了解该方法所在类com.google.genomics.v1.Reference的用法示例。
在下文中一共展示了Reference.getName方法的1个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Java代码示例。
示例1: getReferences
import com.google.genomics.v1.Reference; //导入方法依赖的package包/类
private static List<ReferenceInfo> getReferences(Channel channel, ReadGroupSet readGroupSet) {
Set<String> referenceSetIds = Sets.newHashSet();
if (readGroupSet.getReferenceSetId() != null && !readGroupSet.getReferenceSetId().isEmpty()) {
LOG.fine("Found reference set from read group set " +
readGroupSet.getReferenceSetId());
referenceSetIds.add(readGroupSet.getReferenceSetId());
}
if (readGroupSet.getReadGroupsCount() > 0) {
LOG.fine("Found read groups");
for (ReadGroup readGroup : readGroupSet.getReadGroupsList()) {
if (readGroup.getReferenceSetId() != null && !readGroup.getReferenceSetId().isEmpty()) {
LOG.fine("Found reference set from read group: " +
readGroup.getReferenceSetId());
referenceSetIds.add(readGroup.getReferenceSetId());
}
}
}
ReferenceServiceV1BlockingStub referenceSetStub =
ReferenceServiceV1Grpc.newBlockingStub(channel);
List<ReferenceInfo> references = Lists.newArrayList();
for (String referenceSetId : referenceSetIds) {
LOG.fine("Getting reference set " + referenceSetId);
GetReferenceSetRequest getReferenceSetRequest = GetReferenceSetRequest
.newBuilder().setReferenceSetId(referenceSetId).build();
ReferenceSet referenceSet =
referenceSetStub.getReferenceSet(getReferenceSetRequest);
if (referenceSet == null || referenceSet.getReferenceIdsCount() == 0) {
continue;
}
for (String referenceId : referenceSet.getReferenceIdsList()) {
LOG.fine("Getting reference " + referenceId);
GetReferenceRequest getReferenceRequest = GetReferenceRequest
.newBuilder().setReferenceId(referenceId).build();
Reference reference = referenceSetStub.getReference(getReferenceRequest);
if (reference.getName() != null && !reference.getName().isEmpty()) {
references.add(new ReferenceInfo(reference, referenceSet));
LOG.fine("Adding reference " + reference.getName());
}
}
}
return references;
}