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Java InvalidCAB类代码示例

本文整理汇总了Java中org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB类的典型用法代码示例。如果您正苦于以下问题：Java InvalidCAB类的具体用法？Java InvalidCAB怎么用？Java InvalidCAB使用的例子？那么, 这里精选的类代码示例或许可以为您提供帮助。


InvalidCAB类属于org.ihtsdo.otf.tcc.api.blueprint包，在下文中一共展示了InvalidCAB类的15个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于系统推荐出更棒的Java代码示例。

示例1: setRefexStatus

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
protected static void setRefexStatus(UUID refexUUID, Status status) throws IOException
{
	try
	{
		RefexDynamicVersionBI<?> rdv = readCurrentRefex(refexUUID);
		if (rdv.getStatus() == status)
		{
			LOG.warn("Tried set the status to the value it already has.  Doing nothing");
		}
		else
		{
			RefexDynamicCAB mappingCab = rdv.makeBlueprint(OTFUtility.getViewCoordinateAllowInactive(), IdDirective.PRESERVE, RefexDirective.EXCLUDE);
			mappingCab.setStatus(status);
			RefexDynamicChronicleBI<?> rdc = OTFUtility.getBuilder().construct(mappingCab);

			ConceptChronicleBI cc = ExtendedAppContext.getDataStore().getConcept(rdc.getConceptNid());
			ExtendedAppContext.getDataStore().addUncommitted(cc);
			ExtendedAppContext.getDataStore().commit(cc);
		}
	}
	catch (InvalidCAB | ContradictionException e)
	{
		LOG.error("Unexpected!", e);
		throw new IOException("Internal error");
	}
}
开发者ID:Apelon-VA，项目名称:ISAAC，代码行数:27，代码来源:MappingDAO.java

示例2: updateMappingItem

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
/**
 * Store the values passed in as a new revision of a mappingItem (the old revision remains in the DB)
 * @param mappingItem - The MappingItem with revisions (contains fields where the setters have been called)
 * @throws IOException
 */
public static void updateMappingItem(MappingItem mappingItem) throws IOException
{
	try
	{
		RefexDynamicVersionBI<?> rdv = readCurrentRefex(mappingItem.getPrimordialUUID());
		RefexDynamicCAB mappingItemCab = rdv.makeBlueprint(OTFUtility.getViewCoordinateAllowInactive(), IdDirective.PRESERVE, RefexDirective.EXCLUDE);
		mappingItemCab.getData()[2] = (mappingItem.getEditorStatusConcept() != null ? new RefexDynamicUUID(mappingItem.getEditorStatusConcept()) : null);
		mappingItemCab.validate(OTFUtility.getViewCoordinateAllowInactive());
		RefexDynamicChronicleBI<?> rdc = OTFUtility.getBuilder().construct(mappingItemCab);

		ConceptChronicleBI cc = ExtendedAppContext.getDataStore().getConcept(rdc.getConceptNid());
		AppContext.getRuntimeGlobals().disableAllCommitListeners();
		ExtendedAppContext.getDataStore().addUncommitted(cc);
		ExtendedAppContext.getDataStore().commit(cc);
	}
	catch (InvalidCAB | ContradictionException | PropertyVetoException e)
	{
		LOG.error("Unexpected!", e);
		throw new IOException("Internal error");
	}
	finally
	{
		AppContext.getRuntimeGlobals().enableAllCommitListeners();
	}
}
开发者ID:Apelon-VA，项目名称:ISAAC，代码行数:31，代码来源:MappingItemDAO.java

示例3: saveInformationModel

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
@Override
public void saveInformationModel(InformationModel model) throws IOException,
  InvalidCAB, ContradictionException, NoSuchAlgorithmException,
  PropertyVetoException {
  if (model == null) {
    throw new IOException("Model unexpectedly null");
  }
  LOG.info("Save information model: " + model.getType().getDisplayName()
      + ", " + model.getKey());
  // disable commit listeners for this operation
  try {
    AppContext.getRuntimeGlobals().disableAllCommitListeners();
    syncInformationModelConcept(model);
  } catch (Exception e) {
    LOG.error("Coudn't Disable WF Init & Commit CEM Information Model", e);
  } finally {
    AppContext.getRuntimeGlobals().enableAllCommitListeners();
  }
}
开发者ID:Apelon-VA，项目名称:ISAAC，代码行数:20，代码来源:BdbInformationModelService.java

示例4: handleConstraintEnumerationRefex

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
public void handleConstraintEnumerationRefex() {
	if (value.endsWith("_VALUESET_CODE")) {
		if (!valueSetExists()) {
			try {
				// Create Enumeration
				AppContext.getRuntimeGlobals().disableAllCommitListeners();
				RefexDynamicUsageDescriptionBuilder.createNewRefexDynamicUsageDescriptionConcept(value, value, "Value Set Sememe for " + value, 
																								 new RefexDynamicColumnInfo[] {},
																								 InformationModels.CEM_ENUMERATIONS.getUuids()[0], false, null);
			} catch (IOException | ContradictionException | InvalidCAB
					| PropertyVetoException e) {
				LOGGER.error("Unable to create CEM enumeration for " + value);
			}
			finally
			{
				AppContext.getRuntimeGlobals().enableAllCommitListeners();
			}
		}
	}
}
开发者ID:Apelon-VA，项目名称:ISAAC，代码行数:21，代码来源:CEMConstraint.java

示例5: createNewConcept

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
public ConceptChronicleBI createNewConcept() throws ValidationException, IOException, InvalidCAB, ContradictionException {
		String fsn = getConceptFSN();
		String prefTerm = getConceptPT();

		LOG.debug("Creating concept {}", fsn);
		
		UUID isA = Snomed.IS_A.getUuids()[0];
		UUID parentCons[] = new UUID[parents.size()];
		for (int i = 0; i < parents.size(); i++) {
			parentCons[i] = parents.get(i).getPrimordialUuid();
		}

		IdDirective idDir = IdDirective.GENERATE_HASH;

		LanguageCode lc = LanguageCode.EN_US;
		UUID module = Snomed.CORE_MODULE.getLenient().getPrimordialUuid();
		
		ConceptCB newConCB = new ConceptCB(fsn, prefTerm, lc, isA, idDir, module, parentCons);
										
		newConCB.setDefined(!isPrimitive);
		
		ConceptChronicleBI newCon = OTFUtility.getBuilder().construct(newConCB);
//		OTFUtility.addUncommitted(newCon);

		return newCon;
	}
开发者ID:Apelon-VA，项目名称:ISAAC，代码行数:27，代码来源:WizardController.java

示例6: modifyExtensionAnnotatedRefset

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
private void modifyExtensionAnnotatedRefset(RefexChronicleBI<?> memberChron) throws ContradictionException, InvalidCAB, IOException {
	RefexVersionBI<?> mem = memberChron.getVersion(vc);
	RefexCAB bp = mem.makeBlueprint(vc,  IdDirective.PRESERVE, RefexDirective.INCLUDE);
	if (bp.getMemberUUID() == null) {
		bp.setMemberUuid(mem.getPrimordialUuid());
	}
	
	// Change String
	bp.put(ComponentProperty.STRING_EXTENSION_1, "Modified Testing String");

	
	// Change Description to Pref Term
	int parentRefsetPT = appDb.getRefsetIdentity().getVersion(vc).getPreferredDescription().getNid();
	bp.put(ComponentProperty.COMPONENT_EXTENSION_1_ID, parentRefsetPT);
	
	RefexChronicleBI<?> cabi = appDb.getBuilder().constructIfNotCurrent(bp);
	ConceptVersionBI refCon = appDb.getDB().getConcept(mem.getReferencedComponentNid()).getVersion(appDb.getVC());

	appDb.getDB().addUncommitted(refCon);
}
开发者ID:IHTSDO，项目名称:example-OTF-code，代码行数:21，代码来源:RefsetModify.java

示例7: modifyExtensionRefsetMember

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
private void modifyExtensionRefsetMember(RefexChronicleBI<?> memberChron) throws ContradictionException, InvalidCAB, IOException {
	RefexVersionBI<?> mem = memberChron.getVersion(vc);
	RefexCAB bp = mem.makeBlueprint(vc,  IdDirective.PRESERVE, RefexDirective.INCLUDE);
	if (bp.getMemberUUID() == null) {
		bp.setMemberUuid(mem.getPrimordialUuid());
	}
	
	// Change String
	bp.put(ComponentProperty.STRING_EXTENSION_1, "Modified Testing String");

	
	// Change Description to Pref Term
	int parentRefsetPT = appDb.getRefsetIdentity().getVersion(vc).getPreferredDescription().getNid();
	bp.put(ComponentProperty.COMPONENT_EXTENSION_1_ID, parentRefsetPT);
	
	RefexChronicleBI<?> cabi = appDb.getBuilder().constructIfNotCurrent(bp);
	ConceptVersionBI refCon = appDb.getDB().getConcept(mem.getAssemblageNid()).getVersion(appDb.getVC());

	appDb.getDB().addUncommitted(refCon);
}
开发者ID:IHTSDO，项目名称:example-OTF-code，代码行数:21，代码来源:RefsetModify.java

示例8: createNewRefsetConcept

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
private ConceptChronicleBI createNewRefsetConcept(ConceptVersionBI parent, String fsn, String prefTerm, boolean isAnnotated) throws IOException, InvalidCAB, ContradictionException {
	LanguageCode lc = LanguageCode.EN_US;
	UUID isA = Snomed.IS_A.getUuids()[0];
	IdDirective idDir = IdDirective.GENERATE_HASH;
       UUID module = Snomed.CORE_MODULE.getLenient().getPrimordialUuid();
       UUID parents[] = new UUID[1];
       parents[0] = parent.getPrimordialUuid();

	ConceptCB newConCB = new ConceptCB(fsn, prefTerm, lc, isA, idDir, module, parents);
									
	ConceptChronicleBI newCon = appDb.getBuilder().construct(newConCB);

	newCon.setAnnotationStyleRefex(isAnnotated);
	
	appDb.getDB().addUncommitted(newCon);

	return newCon;
}
开发者ID:IHTSDO，项目名称:example-OTF-code，代码行数:19，代码来源:RefsetCreation.java

示例9: addExtensionMember

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
private void addExtensionMember(ConceptVersionBI refCon, ConceptChronicleBI refComp) throws IOException, InvalidCAB, ContradictionException {

		RefexCAB newMember = new RefexCAB(RefexType.CID_STR,refComp.getConceptNid(),  refCon.getNid(), IdDirective.GENERATE_HASH, RefexDirective.INCLUDE);

		int parentRefsetFSN = appDb.getRefsetIdentity().getVersion(vc).getFullySpecifiedDescription().getNid();
		newMember.put(ComponentProperty.COMPONENT_EXTENSION_1_ID, parentRefsetFSN);
		newMember.put(ComponentProperty.STRING_EXTENSION_1, "Testing String");
		
		RefexChronicleBI<?> newMemChron = appDb.getBuilder().construct(newMember);

		if (!refCon.isAnnotationStyleRefex()) {
			appDb.getDB().addUncommitted(refCon);
		} else {
			appDb.getDB().addUncommitted(refComp);
		}
	}
开发者ID:IHTSDO，项目名称:example-OTF-code，代码行数:17，代码来源:RefsetCreation.java

示例10: createNewConcept

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
private ConceptChronicleBI createNewConcept(ConceptVersionBI con) throws IOException, InvalidCAB, ContradictionException {
	String fsn = "New Test Concept (observable entity)";
	String prefTerm = "New Test Concept PT";
	LanguageCode lc = LanguageCode.EN_US;
	UUID isA = Snomed.IS_A.getUuids()[0];
	IdDirective idDir = IdDirective.GENERATE_HASH;
       UUID module = Snomed.CORE_MODULE.getLenient().getPrimordialUuid();
       UUID parents[] = new UUID[1];
       parents[0] = con.getPrimordialUuid();

	ConceptCB newConCB = new ConceptCB(fsn, prefTerm, lc, isA, idDir, module, parents);
									
	ConceptChronicleBI newCon = appDb.getBuilder().construct(newConCB);
	appDb.getDB().addUncommitted(newCon);

	return newCon;

}
开发者ID:IHTSDO，项目名称:example-OTF-code，代码行数:19，代码来源:ComponentCreation.java

示例11: setActiveStatus

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
public void setActiveStatus(DescriptionVersionBI desc, Status status) throws IOException, ContradictionException, InvalidCAB {
    DescriptionCAB descCAB = desc.makeBlueprint(vc, IdDirective.PRESERVE, RefexDirective.EXCLUDE);
    descCAB.setStatus(status);
    int authorNid = TermAux.USER.getLenient().getConceptNid();
    int editPathNid = TermAux.SNOMED_CORE.getLenient().getConceptNid();
    EditCoordinate ec = new EditCoordinate(authorNid, Snomed.CORE_MODULE.getLenient().getNid(), editPathNid);
    TerminologyBuilderBI tb = Ts.get().getTerminologyBuilder(ec, vc);
    DescriptionChronicleBI descChronicle = tb.construct(descCAB);
    Ts.get().addUncommitted(desc.getEnclosingConcept().getVersion(vc));
    Ts.get().commit();
    System.out.println(descChronicle.getVersion(vc));
}
开发者ID:Apelon-VA，项目名称:OTF-Query-Services，代码行数:13，代码来源:TermstoreChanges.java

示例12: modifyDesc

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
public void modifyDesc(String text, int nid) throws IOException, ContradictionException, InvalidCAB {
    DescriptionVersionBI desc = Ts.get().getConceptVersion(vc, nid).getPreferredDescription();
    DescriptionCAB descCAB = desc.makeBlueprint(vc, IdDirective.PRESERVE, RefexDirective.EXCLUDE);
    descCAB.setText(text);
    int authorNid = TermAux.USER.getLenient().getConceptNid();
    int editPathNid = TermAux.SNOMED_CORE.getLenient().getConceptNid();
    EditCoordinate ec = new EditCoordinate(authorNid, Snomed.CORE_MODULE.getLenient().getNid(), editPathNid);
    TerminologyBuilderBI tb = Ts.get().getTerminologyBuilder(ec, vc);
    DescriptionChronicleBI descChronicle = tb.construct(descCAB);
    Ts.get().addUncommitted(desc.getEnclosingConcept().getVersion(vc));
    Ts.get().commit();
}
开发者ID:Apelon-VA，项目名称:OTF-Query-Services，代码行数:13，代码来源:TermstoreChanges.java

示例13: updateComment

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
/**
 * Store the values passed in as a new revision of a comment (the old revision remains in the DB)
 * @param comment - The MappingItemComment with revisions (contains fields where the setters have been called)
 * @throws IOException
 */
public static void updateComment(MappingItemComment comment) throws IOException 
{
	try
	{
		RefexDynamicVersionBI<?> rdv = readCurrentRefex(comment.getPrimordialUUID());
		RefexDynamicCAB commentCab = rdv.makeBlueprint(OTFUtility.getViewCoordinateAllowInactive(), IdDirective.PRESERVE, RefexDirective.EXCLUDE);
		commentCab.getData()[0] = new RefexDynamicString(comment.getCommentText());
		commentCab.getData()[1] = (StringUtils.isNotBlank(comment.getCommentContext()) ? new RefexDynamicString(comment.getCommentContext()) : null);
		commentCab.validate(null);
		RefexDynamicChronicleBI<?> rdc = OTFUtility.getBuilder().construct(commentCab);

		ConceptChronicleBI cc = ExtendedAppContext.getDataStore().getConcept(rdc.getConceptNid());
		AppContext.getRuntimeGlobals().disableAllCommitListeners();
		ExtendedAppContext.getDataStore().addUncommitted(cc);
		ExtendedAppContext.getDataStore().commit(cc);
	}
	catch (InvalidCAB | ContradictionException | PropertyVetoException e)
	{
		LOG.error("Unexpected!", e);
		throw new IOException("Internal error");
	}
	finally
	{
		AppContext.getRuntimeGlobals().enableAllCommitListeners();
	}
}
开发者ID:Apelon-VA，项目名称:ISAAC，代码行数:32，代码来源:MappingItemCommentDAO.java

示例14: setConceptStatus

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
protected static void setConceptStatus(UUID conceptUUID, Status status) throws IOException
{
	try
	{
		ConceptVersionBI concept = ExtendedAppContext.getDataStore().getConceptVersion(OTFUtility.getViewCoordinateAllowInactive(), conceptUUID);
		ConceptAttributeVersionBI<?> conAttrib = concept.getConceptAttributes().getVersion(OTFUtility.getViewCoordinateAllowInactive());
		if (conAttrib.getStatus() == status)
		{
			LOG.warn("Tried set the status to the value it already has.  Doing nothing");
		}
		else
		{
			
			ConceptAttributeAB conceptAttribCab = conAttrib.makeBlueprint(OTFUtility.getViewCoordinateAllowInactive(), IdDirective.PRESERVE, RefexDirective.EXCLUDE);
			conceptAttribCab.setStatus(status);
			OTFUtility.getBuilder().construct(conceptAttribCab);

			AppContext.getRuntimeGlobals().disableAllCommitListeners();
			ExtendedAppContext.getDataStore().addUncommitted(concept);
			ExtendedAppContext.getDataStore().commit(concept);
		}
	}
	catch (InvalidCAB | ContradictionException e)
	{
		LOG.error("Unexpected!", e);
		throw new IOException("Internal error");
	}
	finally
	{
		AppContext.getRuntimeGlobals().enableAllCommitListeners();
	}
}
开发者ID:Apelon-VA，项目名称:ISAAC，代码行数:33，代码来源:MappingDAO.java

示例15: syncDescriptions

import org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB; //导入依赖的package包/类
/**
 * Sync descriptions. Retire descriptions no longer matching key or name.
 * @param modelConceptCB the model concept cb
 * @param model the model
 * @throws ContradictionException
 * @throws InvalidCAB
 * @throws IOException
 */
private void syncDescriptions(ConceptCB modelConceptCB, InformationModel model)
  throws IOException, InvalidCAB, ContradictionException {
  for (DescriptionCAB descCAB : modelConceptCB.getDescriptionCABs()) {
    if (descCAB.getText().equals(model.getKey())) {
      continue;
    }
    if (descCAB.getText().equals(model.getName())) {
      continue;
    }
    descCAB.setRetired();
    OTFUtility.getBuilder().constructIfNotCurrent(descCAB);
  }
}
开发者ID:Apelon-VA，项目名称:ISAAC，代码行数:22，代码来源:BdbInformationModelService.java


注：本文中的org.ihtsdo.otf.tcc.api.blueprint.InvalidCAB类示例由纯净天空整理自Github/MSDocs等开源代码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。